BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS20600 (671 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U51225-1|AAA96405.1| 692|Anopheles gambiae hexamerin protein. 32 0.014 AF020872-1|AAC31875.1| 692|Anopheles gambiae hexamerin A protein. 32 0.014 AF020871-1|AAC31874.1| 692|Anopheles gambiae hexamerin A protein. 32 0.014 AF020870-1|AAC31873.1| 692|Anopheles gambiae hexamerin A protein. 31 0.033 M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 23 6.6 AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein. 23 6.6 AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ... 23 8.8 >U51225-1|AAA96405.1| 692|Anopheles gambiae hexamerin protein. Length = 692 Score = 32.3 bits (70), Expect = 0.014 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Frame = +3 Query: 336 SREYLNRGFSDKLVQAYYEY-MVDIAILLGADKTKATEELKESLQFEM 476 + EYLN D + AYY Y M+D + LLG DK ++ + L + M Sbjct: 218 TEEYLNYNTEDIGLNAYYYYFMMDYSFLLGGDKFGLIKDRRGELYWYM 265 >AF020872-1|AAC31875.1| 692|Anopheles gambiae hexamerin A protein. Length = 692 Score = 32.3 bits (70), Expect = 0.014 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Frame = +3 Query: 336 SREYLNRGFSDKLVQAYYEY-MVDIAILLGADKTKATEELKESLQFEM 476 + EYLN D + AYY Y M+D + LLG DK ++ + L + M Sbjct: 218 TEEYLNYNTEDIGLNAYYYYFMMDYSFLLGGDKFGLIKDRRGELYWYM 265 >AF020871-1|AAC31874.1| 692|Anopheles gambiae hexamerin A protein. Length = 692 Score = 32.3 bits (70), Expect = 0.014 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Frame = +3 Query: 336 SREYLNRGFSDKLVQAYYEY-MVDIAILLGADKTKATEELKESLQFEM 476 + EYLN D + AYY Y M+D + LLG DK ++ + L + M Sbjct: 218 TEEYLNYNTEDIGLNAYYYYFMMDYSFLLGGDKFGLIKDRRGELYWYM 265 >AF020870-1|AAC31873.1| 692|Anopheles gambiae hexamerin A protein. Length = 692 Score = 31.1 bits (67), Expect = 0.033 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Frame = +3 Query: 336 SREYLNRGFSDKLVQAYYEY-MVDIAILLGADKTKATEELKESLQFEM 476 + EYLN D + AYY Y M+D + LLG DK ++ + L + M Sbjct: 218 TEEYLNYYTEDIGLNAYYYYFMMDYSFLLGGDKFGLIKDRRGELYWYM 265 >M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles gambiae RT2 retroposon. ). Length = 1222 Score = 23.4 bits (48), Expect = 6.6 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = +1 Query: 76 LYQACMNRTAIEARGVQPLLDMLKRLGGWP 165 LYQ C+NR + A+ + L +L + G P Sbjct: 515 LYQDCLNRASFPAQWKRQRLVLLPKQGKPP 544 >AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein. Length = 3320 Score = 23.4 bits (48), Expect = 6.6 Identities = 7/13 (53%), Positives = 12/13 (92%) Frame = +2 Query: 470 RNEISQHFVTSGK 508 RN+++QH +T+GK Sbjct: 2929 RNDVTQHAITTGK 2941 >AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1 chain protein. Length = 1024 Score = 23.0 bits (47), Expect = 8.8 Identities = 10/29 (34%), Positives = 17/29 (58%) Frame = +1 Query: 31 PVTPEEPRPFVLAKTLYQACMNRTAIEAR 117 PVT E RP++ T+ +A N A+ ++ Sbjct: 890 PVTENEMRPYISRCTVCEAPTNVIAVHSQ 918 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 693,025 Number of Sequences: 2352 Number of extensions: 14209 Number of successful extensions: 24 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 20 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 21 length of database: 563,979 effective HSP length: 62 effective length of database: 418,155 effective search space used: 67322955 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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