Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20600
         (671 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g45750.1 68415.m05691 dehydration-responsive family protein s...    34   0.075
At4g00750.1 68417.m00102 dehydration-responsive family protein s...    31   0.70 
At1g43680.1 68414.m05018 hypothetical protein                          31   0.70 
At3g06520.1 68416.m00756 agenet domain-containing protein contai...    29   2.8  
At1g19715.1 68414.m02461 jacalin lectin family protein similar t...    27   8.6  
At1g16110.1 68414.m01931 wall-associated kinase, putative contai...    27   8.6  

>At2g45750.1 68415.m05691 dehydration-responsive family protein
           similar to early-responsive to dehydration stress ERD3
           protein [Arabidopsis thaliana] GI:15320410; contains
           Pfam profile PF03141: Putative methyltransferase
          Length = 631

 Score = 34.3 bits (75), Expect = 0.075
 Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
 Frame = +1

Query: 133 LDMLKRLGGWPVLDGQ--SWDENSFSWEQSVYKFRDAGYSVDYSSISLSAWMLKIQRDES 306
           +D + R GG+ +L G   +W +    WE+++         ++  + SL  W   +QRD+ 
Sbjct: 296 VDRVLRPGGYWILSGPPINWQKRWKGWERTMDDLNAEQTQIEQVARSL-CWKKVVQRDDL 354

Query: 307 LIWTRP 324
            IW +P
Sbjct: 355 AIWQKP 360


>At4g00750.1 68417.m00102 dehydration-responsive family protein
           similar to early-responsive to dehydration stress ERD3
           protein [Arabidopsis thaliana] GI:15320410; contains
           Pfam profile PF03141: Putative methyltransferase
          Length = 633

 Score = 31.1 bits (67), Expect = 0.70
 Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
 Frame = +1

Query: 133 LDMLKRLGGWPVLDGQ--SWDENSFSWEQSVYKFRDAGYSVDYSSISLSAWMLKIQRDES 306
           +D + R GG+ +L G   +W  +   WE++          ++  + SL  W   +QR++ 
Sbjct: 305 VDRVLRPGGYWILSGPPINWQRHWKGWERTRDDLNSEQSQIERVARSL-CWRKLVQREDL 363

Query: 307 LIWTRP 324
            +W +P
Sbjct: 364 AVWQKP 369


>At1g43680.1 68414.m05018 hypothetical protein
          Length = 247

 Score = 31.1 bits (67), Expect = 0.70
 Identities = 17/43 (39%), Positives = 19/43 (44%)
 Frame = -1

Query: 170 STGQPPSRFSISSNGWTPRASMAVLFMQAWYKVLASTNGLGSS 42
           + G  P RFS SSN  TP AS + L    W      T   G S
Sbjct: 169 TAGNLPHRFSSSSNSSTPIASASFLAASGWRPTTRPTYEFGES 211


>At3g06520.1 68416.m00756 agenet domain-containing protein contains
           Pfam PF05641: Agenet domain
          Length = 466

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = +3

Query: 276 VDVKNSTRRVIDLDQASLGLSREYLNRGFSDKLVQ 380
           V+ K   R  I++DQ +L L RE+L+ G+   L+Q
Sbjct: 111 VEFKGENRPEIEVDQFNLRLHREWLDGGWVPSLLQ 145


>At1g19715.1 68414.m02461 jacalin lectin family protein similar to
           agglutinin [Castanea crenata] GI:25528883; contains Pfam
           profile PF01419: Jacalin-like lectin domain
          Length = 595

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
 Frame = +1

Query: 154 GGWPVLDGQSWDENSFSWEQSVYKFR--DA--GYSVDYSSISLSAWMLKIQRDESLIWT 318
           G W    GQ+WD+  FS  + ++  R  DA     ++Y     S W +K   D + + T
Sbjct: 436 GPWGGDGGQAWDDGVFSGIKQIFVTRGNDAITSIQIEYDRNGQSVWSIKHGGDSNGVAT 494


>At1g16110.1 68414.m01931 wall-associated kinase, putative contains
           similarity to wall-associated kinase 2 GI:4826399 from
           [Arabidopsis thaliana]
          Length = 642

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -1

Query: 95  FMQAWYKVLASTNGLGSSGVT 33
           ++  WY+V+ +T+  GSSG T
Sbjct: 62  YLNGWYEVICNTSTSGSSGTT 82


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,543,804
Number of Sequences: 28952
Number of extensions: 296402
Number of successful extensions: 823
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 800
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 823
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1422784080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)