Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20599
(700 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 151 5e-37
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 151 5e-37
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 150 9e-37
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 149 2e-36
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 140 1e-33
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 123 2e-28
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 99 4e-21
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 81 6e-16
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 81 6e-16
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 81 8e-16
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 81 1e-15
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 1e-15
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 80 1e-15
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 3e-15
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 79 5e-15
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 3e-14
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 4e-14
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 3e-13
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 70 2e-12
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 64 8e-11
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25) 62 3e-10
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 61 7e-10
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 54 1e-07
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 53 3e-07
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 50 2e-06
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 7e-05
SB_26824| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18) 39 0.004
SB_16885| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2) 29 2.7
SB_50370| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_50693| Best HMM Match : C2 (HMM E-Value=0) 28 6.3
SB_37087| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_41962| Best HMM Match : RVT_1 (HMM E-Value=1.4e-18) 28 8.4
SB_28870| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_14466| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_58050| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 151 bits (366), Expect = 5e-37
Identities = 67/69 (97%), Positives = 69/69 (100%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 433
+DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE+E
Sbjct: 66 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE 125
Query: 434 SCDCLQGFQ 460
SCDCLQGFQ
Sbjct: 126 SCDCLQGFQ 134
Score = 140 bits (339), Expect = 1e-33
Identities = 62/70 (88%), Positives = 64/70 (91%)
Frame = +3
Query: 60 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 239
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 240 PRAILSTWSP 269
PRAIL P
Sbjct: 61 PRAILVDLEP 70
Score = 138 bits (333), Expect = 5e-33
Identities = 64/67 (95%), Positives = 65/67 (97%)
Frame = +1
Query: 499 GHPLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 678
G LISKIREEYPDRIMNT+SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL
Sbjct: 148 GTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 207
Query: 679 YDICFRT 699
YDICFRT
Sbjct: 208 YDICFRT 214
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 151 bits (366), Expect = 5e-37
Identities = 67/69 (97%), Positives = 69/69 (100%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 433
+DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE+E
Sbjct: 279 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE 338
Query: 434 SCDCLQGFQ 460
SCDCLQGFQ
Sbjct: 339 SCDCLQGFQ 347
Score = 144 bits (350), Expect = 5e-35
Identities = 63/73 (86%), Positives = 67/73 (91%)
Frame = +3
Query: 51 LYKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGG 230
L+KMREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GG
Sbjct: 211 LFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGG 270
Query: 231 KYVPRAILSTWSP 269
KYVPRA+L P
Sbjct: 271 KYVPRAVLVDLEP 283
Score = 138 bits (333), Expect = 5e-33
Identities = 64/67 (95%), Positives = 65/67 (97%)
Frame = +1
Query: 499 GHPLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 678
G LISKIREEYPDRIMNT+SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL
Sbjct: 361 GTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 420
Query: 679 YDICFRT 699
YDICFRT
Sbjct: 421 YDICFRT 427
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 150 bits (364), Expect = 9e-37
Identities = 66/69 (95%), Positives = 69/69 (100%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 433
+DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE+E
Sbjct: 11 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE 70
Query: 434 SCDCLQGFQ 460
SCDC+QGFQ
Sbjct: 71 SCDCIQGFQ 79
Score = 135 bits (326), Expect = 4e-32
Identities = 62/64 (96%), Positives = 63/64 (98%)
Frame = +1
Query: 508 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDI 687
LI KIREEYPDRIMNT+SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDI
Sbjct: 96 LILKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDI 155
Query: 688 CFRT 699
CFRT
Sbjct: 156 CFRT 159
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 149 bits (362), Expect = 2e-36
Identities = 65/69 (94%), Positives = 69/69 (100%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 433
+DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E
Sbjct: 66 IDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVLDVVRKEAE 125
Query: 434 SCDCLQGFQ 460
SCDC+QGFQ
Sbjct: 126 SCDCIQGFQ 134
Score = 137 bits (332), Expect = 7e-33
Identities = 63/67 (94%), Positives = 65/67 (97%)
Frame = +1
Query: 499 GHPLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 678
G LISKIREEYPDRIMNT+S+VPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL
Sbjct: 148 GTLLISKIREEYPDRIMNTFSIVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 207
Query: 679 YDICFRT 699
YDICFRT
Sbjct: 208 YDICFRT 214
Score = 137 bits (331), Expect = 9e-33
Identities = 60/70 (85%), Positives = 64/70 (91%)
Frame = +3
Query: 60 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 239
MREIV LQAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 240 PRAILSTWSP 269
PR++L P
Sbjct: 61 PRSVLIDLEP 70
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 140 bits (339), Expect = 1e-33
Identities = 62/70 (88%), Positives = 64/70 (91%)
Frame = +3
Query: 60 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 239
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 240 PRAILSTWSP 269
PRAIL P
Sbjct: 61 PRAILVDLEP 70
Score = 61.3 bits (142), Expect = 7e-10
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVF 334
+DLEPGTMDSVRSGPFGQIFRPDNFVF
Sbjct: 66 VDLEPGTMDSVRSGPFGQIFRPDNFVF 92
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 123 bits (296), Expect = 2e-28
Identities = 50/69 (72%), Positives = 61/69 (88%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 433
+DLEPGTMD+VR GP G +FRPDNFV QSGA NNWAKGHY+EGAEL+D++ DV+RKE+E
Sbjct: 22 VDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELIDNIFDVLRKEAE 81
Query: 434 SCDCLQGFQ 460
+CDC+QG Q
Sbjct: 82 NCDCMQGVQ 90
Score = 47.2 bits (107), Expect = 1e-05
Identities = 20/28 (71%), Positives = 25/28 (89%)
Frame = +1
Query: 499 GHPLISKIREEYPDRIMNTYSVVPSPKV 582
G ++SKIREEYPDRI++ +SVVPSPKV
Sbjct: 104 GTLILSKIREEYPDRILSAFSVVPSPKV 131
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 98.7 bits (235), Expect = 4e-21
Identities = 43/65 (66%), Positives = 54/65 (83%)
Frame = +1
Query: 499 GHPLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 678
G L+SKIREEYPDR+++++ V+PSP VS+TV EPYNATLS HQLV+ D CIDNEAL
Sbjct: 56 GSLLLSKIREEYPDRLVSSFCVLPSPLVSETVTEPYNATLSFHQLVDVADAAICIDNEAL 115
Query: 679 YDICF 693
Y+IC+
Sbjct: 116 YNICY 120
Score = 65.3 bits (152), Expect = 5e-11
Identities = 27/41 (65%), Positives = 34/41 (82%)
Frame = +2
Query: 338 QSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQ 460
Q+ A NNWAKG YTEGAEL+DS +D +RK +E+CD +QGFQ
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRKLAENCDTVQGFQ 42
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 81.4 bits (192), Expect = 6e-16
Identities = 35/68 (51%), Positives = 48/68 (70%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 433
+DLEP +D VR+G + Q+F P+ V G+ A NN+A+GHYT G E+VD VLD +RK ++
Sbjct: 68 VDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEIVDLVLDRIRKLAD 127
Query: 434 SCDCLQGF 457
C LQGF
Sbjct: 128 QCTGLQGF 135
Score = 81.0 bits (191), Expect = 8e-16
Identities = 34/68 (50%), Positives = 48/68 (70%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 433
+DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VLD +RK ++
Sbjct: 501 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLVLDRIRKLAD 560
Query: 434 SCDCLQGF 457
C LQGF
Sbjct: 561 QCTGLQGF 568
Score = 62.9 bits (146), Expect = 2e-10
Identities = 25/63 (39%), Positives = 43/63 (68%)
Frame = +1
Query: 508 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDI 687
L+ ++ +Y + +++ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YDI
Sbjct: 153 LMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDI 212
Query: 688 CFR 696
C R
Sbjct: 213 CRR 215
Score = 62.9 bits (146), Expect = 2e-10
Identities = 25/63 (39%), Positives = 43/63 (68%)
Frame = +1
Query: 508 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDI 687
L+ ++ +Y + +++ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YDI
Sbjct: 586 LMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDI 645
Query: 688 CFR 696
C R
Sbjct: 646 CRR 648
Score = 56.8 bits (131), Expect = 2e-08
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +3
Query: 54 YKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASG 227
Y+ RE + + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 432 YEERECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 491
Query: 228 GKYVPRAILSTWSP 269
GK+VPRA+ P
Sbjct: 492 GKHVPRAVFVDLEP 505
Score = 56.4 bits (130), Expect = 2e-08
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +3
Query: 60 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 233
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 234 YVPRAILSTWSP 269
+VPRA+ P
Sbjct: 61 HVPRAVFVDLEP 72
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 81.4 bits (192), Expect = 6e-16
Identities = 34/68 (50%), Positives = 48/68 (70%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 433
+DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK ++
Sbjct: 653 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLAD 712
Query: 434 SCDCLQGF 457
C LQGF
Sbjct: 713 QCTGLQGF 720
Score = 80.6 bits (190), Expect = 1e-15
Identities = 34/68 (50%), Positives = 48/68 (70%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 433
+DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VLD +RK ++
Sbjct: 132 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD 191
Query: 434 SCDCLQGF 457
C LQGF
Sbjct: 192 QCTGLQGF 199
Score = 62.9 bits (146), Expect = 2e-10
Identities = 25/63 (39%), Positives = 43/63 (68%)
Frame = +1
Query: 508 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDI 687
L+ ++ +Y + +++ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YDI
Sbjct: 738 LMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDI 797
Query: 688 CFR 696
C R
Sbjct: 798 CRR 800
Score = 62.5 bits (145), Expect = 3e-10
Identities = 24/63 (38%), Positives = 43/63 (68%)
Frame = +1
Query: 508 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDI 687
L+ ++ +Y + +++ P+P++S VVEPYN+ L+ H +E++D + +DNEA+YDI
Sbjct: 217 LMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDI 276
Query: 688 CFR 696
C R
Sbjct: 277 CRR 279
Score = 54.8 bits (126), Expect = 6e-08
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +3
Query: 60 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 233
+RE + + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 234 YVPRAILSTWSP 269
+VPRA+ P
Sbjct: 646 HVPRAVFVDLEP 657
Score = 54.4 bits (125), Expect = 8e-08
Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Frame = +3
Query: 51 LYKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEAS 224
L RE + + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 62 LILQRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETG 121
Query: 225 GGKYVPRAILSTWSP 269
GK+VPRA+ P
Sbjct: 122 AGKHVPRAVFVDLEP 136
Score = 54.4 bits (125), Expect = 8e-08
Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +3
Query: 63 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 236
RE + + GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 237 VPRAILSTWSP 269
VPRA+ P
Sbjct: 574 VPRAVFVDLEP 584
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 81.0 bits (191), Expect = 8e-16
Identities = 44/91 (48%), Positives = 57/91 (62%), Gaps = 24/91 (26%)
Frame = +1
Query: 499 GHPLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDET-------- 654
G ++ ++EEYPDRI+++ SV PSP+VS+ VVEPYNA LSVHQL+E TDE
Sbjct: 29 GTLILYHLQEEYPDRILSSVSVFPSPRVSEIVVEPYNAALSVHQLLETTDEVSEIVVEPY 88
Query: 655 ----------------YCIDNEALYDICFRT 699
+CIDNEALYDIC++T
Sbjct: 89 NAALSVHQLLETTDEVFCIDNEALYDICYKT 119
Score = 28.7 bits (61), Expect = 4.8
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +2
Query: 416 VRKESESCDCLQGFQ 460
+RKE+E CD +QGFQ
Sbjct: 1 MRKEAEDCDAIQGFQ 15
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 80.6 bits (190), Expect = 1e-15
Identities = 33/68 (48%), Positives = 48/68 (70%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 433
+DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK ++
Sbjct: 67 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDRIRKLAD 126
Query: 434 SCDCLQGF 457
C LQGF
Sbjct: 127 QCTGLQGF 134
Score = 62.9 bits (146), Expect = 2e-10
Identities = 25/63 (39%), Positives = 43/63 (68%)
Frame = +1
Query: 508 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDI 687
L+ ++ +Y + +++ P+P+VS VVEPYN+ L+ H +E++D + +DNEA+YDI
Sbjct: 152 LMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDI 211
Query: 688 CFR 696
C R
Sbjct: 212 CRR 214
Score = 54.4 bits (125), Expect = 8e-08
Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Frame = +3
Query: 63 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 236
RE + + GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 237 VPRAILSTWSP 269
VPRA+ P
Sbjct: 61 VPRAVFVDLEP 71
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 80.6 bits (190), Expect = 1e-15
Identities = 33/67 (49%), Positives = 48/67 (71%)
Frame = +2
Query: 257 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 436
DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D+VLD +RK ++
Sbjct: 69 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDTVLDRLRKLADG 128
Query: 437 CDCLQGF 457
C LQGF
Sbjct: 129 CTGLQGF 135
Score = 62.9 bits (146), Expect = 2e-10
Identities = 24/63 (38%), Positives = 43/63 (68%)
Frame = +1
Query: 508 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDI 687
L+ ++ +Y + +++ P+P++S VVEPYN+ L+ H +E++D + +DNEA+YDI
Sbjct: 153 LMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSVLTTHTTLEHSDCAFMVDNEAIYDI 212
Query: 688 CFR 696
C R
Sbjct: 213 CRR 215
Score = 55.2 bits (127), Expect = 5e-08
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +3
Query: 60 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 233
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 234 YVPRAILSTWSP 269
+VPRA+ P
Sbjct: 61 HVPRAVFCDLEP 72
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 80.2 bits (189), Expect = 1e-15
Identities = 33/67 (49%), Positives = 47/67 (70%)
Frame = +2
Query: 257 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 436
DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK ++
Sbjct: 873 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDLVLDRIRKLADQ 932
Query: 437 CDCLQGF 457
C LQGF
Sbjct: 933 CTGLQGF 939
Score = 78.2 bits (184), Expect = 6e-15
Identities = 33/68 (48%), Positives = 47/68 (69%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 433
+DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E +D VLD +RK ++
Sbjct: 439 VDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDIVLDRLRKLAD 498
Query: 434 SCDCLQGF 457
C LQGF
Sbjct: 499 GCTGLQGF 506
Score = 62.5 bits (145), Expect = 3e-10
Identities = 24/63 (38%), Positives = 43/63 (68%)
Frame = +1
Query: 508 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDI 687
L+ ++ +Y + +++ P+P++S VVEPYN+ L+ H +E++D + +DNEA+YDI
Sbjct: 957 LMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDI 1016
Query: 688 CFR 696
C R
Sbjct: 1017 CRR 1019
Score = 62.1 bits (144), Expect = 4e-10
Identities = 24/63 (38%), Positives = 42/63 (66%)
Frame = +1
Query: 508 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDI 687
L+ ++ +Y + +++ P+P +S VVEPYN+ L+ H +E++D + +DNEA+YDI
Sbjct: 524 LMERLSVDYGKKSKLEFAIYPAPHISSAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDI 583
Query: 688 CFR 696
C R
Sbjct: 584 CRR 586
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +3
Query: 54 YKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASG 227
Y+ RE + + GQ G Q+G WE+ EHGI P G D + + N +++E
Sbjct: 803 YEERECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 862
Query: 228 GKYVPRAILSTWSP 269
GK+VPRA+ + P
Sbjct: 863 GKHVPRAVFADLEP 876
Score = 53.2 bits (122), Expect = 2e-07
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +3
Query: 63 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 236
RE + + GQ G QIG WE+ EHGI P G D + + N ++ E GK+
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 237 VPRAILSTWSP 269
VPRA+ P
Sbjct: 433 VPRAVFVDLEP 443
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 79.4 bits (187), Expect = 3e-15
Identities = 31/68 (45%), Positives = 48/68 (70%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 433
+DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G + +D+VLD +RK ++
Sbjct: 486 VDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKDHIDNVLDRIRKLAD 545
Query: 434 SCDCLQGF 457
C LQGF
Sbjct: 546 QCSGLQGF 553
Score = 77.4 bits (182), Expect = 1e-14
Identities = 32/67 (47%), Positives = 47/67 (70%)
Frame = +2
Query: 257 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 436
DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G +L++ VLD +RK ++
Sbjct: 54 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQLIEIVLDRLRKLADQ 113
Query: 437 CDCLQGF 457
C LQGF
Sbjct: 114 CTGLQGF 120
Score = 63.3 bits (147), Expect = 2e-10
Identities = 24/63 (38%), Positives = 43/63 (68%)
Frame = +1
Query: 508 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDI 687
L+ ++ +Y + +++ P+P++S VVEPYN+ L+ H +E++D + +DNEA+YDI
Sbjct: 571 LLERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSVLTTHTTLEHSDCAFMVDNEAIYDI 630
Query: 688 CFR 696
C R
Sbjct: 631 CRR 633
Score = 62.5 bits (145), Expect = 3e-10
Identities = 24/63 (38%), Positives = 43/63 (68%)
Frame = +1
Query: 508 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDI 687
L+ ++ +Y + +++ P+P++S VVEPYN+ L+ H +E++D + +DNEA+YDI
Sbjct: 138 LMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDI 197
Query: 688 CFR 696
C R
Sbjct: 198 CRR 200
Score = 56.4 bits (130), Expect = 2e-08
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Frame = +3
Query: 54 YKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASG 227
Y+ RE V + GQ G Q+G WE+ EHGI P G D + + N +++E
Sbjct: 417 YEERECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 476
Query: 228 GKYVPRAILSTWSPA 272
GK+VPRA+ P+
Sbjct: 477 GKHVPRAVFVDLEPS 491
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +3
Query: 105 IGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYVPRAILSTWSP 269
+G WE+ EHGI P G D + + N +++E GK+VPRA+ P
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFCDLEP 57
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 78.6 bits (185), Expect = 5e-15
Identities = 33/68 (48%), Positives = 47/68 (69%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 433
+DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD RK ++
Sbjct: 68 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRCRKLAD 127
Query: 434 SCDCLQGF 457
C LQGF
Sbjct: 128 QCTGLQGF 135
Score = 62.5 bits (145), Expect = 3e-10
Identities = 24/63 (38%), Positives = 43/63 (68%)
Frame = +1
Query: 508 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDI 687
L+ ++ +Y + +++ P+P++S VVEPYN+ L+ H +E++D + +DNEA+YDI
Sbjct: 153 LMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDI 212
Query: 688 CFR 696
C R
Sbjct: 213 CRR 215
Score = 55.2 bits (127), Expect = 5e-08
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +3
Query: 60 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 233
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 234 YVPRAILSTWSP 269
+VPRA+ P
Sbjct: 61 HVPRAVFVDLEP 72
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 75.8 bits (178), Expect = 3e-14
Identities = 31/68 (45%), Positives = 46/68 (67%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 433
+DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E +D LD +RK ++
Sbjct: 33 VDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLAD 92
Query: 434 SCDCLQGF 457
C LQGF
Sbjct: 93 QCTGLQGF 100
Score = 64.1 bits (149), Expect = 1e-10
Identities = 26/63 (41%), Positives = 43/63 (68%)
Frame = +1
Query: 508 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDI 687
L+ ++ +Y + ++V P+P++S VVEPYN+ LS H +E++D + +DNEA+YDI
Sbjct: 118 LMERLSVDYGKKSKLEFAVYPAPQISTAVVEPYNSILSTHTTLEHSDCAFMVDNEAIYDI 177
Query: 688 CFR 696
C R
Sbjct: 178 CRR 180
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 75.4 bits (177), Expect = 4e-14
Identities = 30/68 (44%), Positives = 47/68 (69%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 433
+DLEP +D VR+G + ++ P+ + G+ A NN+A+GHYT G E+V+ V+D +RK ++
Sbjct: 979 VDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKEMVEVVMDKIRKMTD 1038
Query: 434 SCDCLQGF 457
C LQGF
Sbjct: 1039 QCSGLQGF 1046
Score = 61.3 bits (142), Expect = 7e-10
Identities = 24/56 (42%), Positives = 39/56 (69%)
Frame = +1
Query: 529 EYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 696
+Y + ++V P+P +S VVEPYN+ L+ H +E++D T+ +DNEA+YD+C R
Sbjct: 1071 DYGKKSKLEFAVYPAPHISTAVVEPYNSVLTTHTTLEHSDCTFMVDNEAIYDLCRR 1126
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 72.5 bits (170), Expect = 3e-13
Identities = 30/60 (50%), Positives = 42/60 (70%)
Frame = +2
Query: 278 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGF 457
D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK ++ C LQGF
Sbjct: 13 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGF 72
Score = 62.5 bits (145), Expect = 3e-10
Identities = 24/63 (38%), Positives = 43/63 (68%)
Frame = +1
Query: 508 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDI 687
L+ ++ +Y + +++ P+P++S VVEPYN+ L+ H +E++D + +DNEA+YDI
Sbjct: 90 LMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDI 149
Query: 688 CFR 696
C R
Sbjct: 150 CRR 152
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 70.1 bits (164), Expect = 2e-12
Identities = 29/58 (50%), Positives = 41/58 (70%)
Frame = +2
Query: 284 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGF 457
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK ++ C LQGF
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGF 60
Score = 62.5 bits (145), Expect = 3e-10
Identities = 24/63 (38%), Positives = 43/63 (68%)
Frame = +1
Query: 508 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDI 687
L+ ++ +Y + +++ P+P++S VVEPYN+ L+ H +E++D + +DNEA+YDI
Sbjct: 78 LMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDI 137
Query: 688 CFR 696
C R
Sbjct: 138 CRR 140
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 64.5 bits (150), Expect = 8e-11
Identities = 26/58 (44%), Positives = 39/58 (67%)
Frame = +2
Query: 284 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGF 457
+R+G + Q+F P+ + G+ A NN+A+GHYT G E +D LD +RK ++ C LQGF
Sbjct: 3 IRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGF 60
Score = 62.9 bits (146), Expect = 2e-10
Identities = 25/63 (39%), Positives = 43/63 (68%)
Frame = +1
Query: 508 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDI 687
L+ ++ +Y + ++V P+P++S VVEPYN+ L+ H +E++D + +DNEA+YDI
Sbjct: 78 LMERLSVDYGKKSKLEFAVYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDI 137
Query: 688 CFR 696
C R
Sbjct: 138 CRR 140
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 64.1 bits (149), Expect = 1e-10
Identities = 26/63 (41%), Positives = 43/63 (68%)
Frame = +1
Query: 508 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDI 687
L+ ++ +Y R ++V P+P++S VVEPYN+ L+ H +E++D + +DNEA+YDI
Sbjct: 284 LMERLSVDYGKRSKLEFAVYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDI 343
Query: 688 CFR 696
C R
Sbjct: 344 CRR 346
Score = 45.6 bits (103), Expect = 4e-05
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Frame = +3
Query: 48 NLYKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLER----INVYYN 215
++ MRE + + GQ G QIG WE+ EHGI P G H SD +R + +++
Sbjct: 192 SIQTMRECLSIHVGQAGVQIGNACWELYCLEHGIQPDG--HMPSDQSADRCDDSFSTFFS 249
Query: 216 EASGGKY 236
E + GK+
Sbjct: 250 ETASGKH 256
>SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25)
Length = 139
Score = 62.5 bits (145), Expect = 3e-10
Identities = 24/63 (38%), Positives = 43/63 (68%)
Frame = +1
Query: 508 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDI 687
L+ ++ +Y + +++ P+P++S VVEPYN+ L+ H +E++D + +DNEA+YDI
Sbjct: 28 LMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDI 87
Query: 688 CFR 696
C R
Sbjct: 88 CRR 90
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 61.3 bits (142), Expect = 7e-10
Identities = 24/63 (38%), Positives = 42/63 (66%)
Frame = +1
Query: 508 LISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDI 687
L+ ++ +Y + ++V P+P ++ VVEPYN+ L+ H +E++D + +DNEA+YDI
Sbjct: 143 LMERLSVDYGKKSKLEFAVYPAPHIASAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDI 202
Query: 688 CFR 696
C R
Sbjct: 203 CRR 205
Score = 56.8 bits (131), Expect = 2e-08
Identities = 30/82 (36%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Frame = +3
Query: 60 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 233
MRE + + GQ G QIG WE+ EHGI P G D + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 234 YVPRAILSTWSPAPWTLSAPDL 299
+VPRA+ P LS L
Sbjct: 61 HVPRAVFVDLEPTVVALSPEQL 82
Score = 55.2 bits (127), Expect = 5e-08
Identities = 23/47 (48%), Positives = 32/47 (68%)
Frame = +2
Query: 317 PDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGF 457
P+ + G+ A NN+A+GHYT G + VD VLD +RK ++ C LQGF
Sbjct: 79 PEQLITGKEDAANNYARGHYTIGKQQVDQVLDRLRKLADQCSGLQGF 125
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 59.7 bits (138), Expect = 2e-09
Identities = 24/47 (51%), Positives = 34/47 (72%)
Frame = +2
Query: 284 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 424
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRK 49
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 59.7 bits (138), Expect = 2e-09
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Frame = +3
Query: 60 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQ--LERINVYYNEASGGK 233
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GGK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 234 YVPRAILSTWSPA 272
+VPRA+ P+
Sbjct: 61 HVPRAVFVDLEPS 73
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 53.6 bits (123), Expect = 1e-07
Identities = 25/64 (39%), Positives = 39/64 (60%)
Frame = +1
Query: 499 GHPLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 678
G +++ + ++YPD T +V PS D + PYN+ L++HQL E+ D I+N+AL
Sbjct: 162 GTYVLNLLHDDYPDVYRFTTAVYPSAD-DDVITSPYNSVLAMHQLTEHADCVLPIENQAL 220
Query: 679 YDIC 690
DIC
Sbjct: 221 VDIC 224
Score = 34.7 bits (76), Expect = 0.073
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNW 361
+D+E G ++++ GP +F + SG GNNW
Sbjct: 80 IDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 52.8 bits (121), Expect = 3e-07
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +2
Query: 284 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 424
VR G + +F PD + G+ A NN+A+GHYT G E +D L+ +RK
Sbjct: 3 VRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRK 49
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 49.6 bits (113), Expect = 2e-06
Identities = 23/48 (47%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +2
Query: 317 PDNFVFGQS-GAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGF 457
P F Q G+GNNWA G G + +D VLD+V++E E CD L GF
Sbjct: 94 PKGQQFSQKRGSGNNWAHGFSEHGPKSIDKVLDLVQREVEKCDRLDGF 141
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/59 (30%), Positives = 35/59 (59%)
Frame = +1
Query: 514 SKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 690
+ +R+ YP+ + V P + + +V+ YNATL++ QL +++D ++N+ L IC
Sbjct: 161 NSLRDFYPNSFIVNNVVWPY-SMGEVIVQNYNATLTLAQLYKSSDAIIIVENDKLQKIC 218
Score = 33.1 bits (72), Expect = 0.22
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +3
Query: 69 IVHLQAGQCGNQIGAKFWEIISDE 140
IV LQ GQCGNQIG + +++I ++
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVED 26
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 44.8 bits (101), Expect = 7e-05
Identities = 18/35 (51%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = +3
Query: 117 FWEIISDEHGIDPTGAYHG-DSDLQLERINVYYNE 218
FWE+I++EHGIDP G S +Q +R+NVY++E
Sbjct: 1 FWEVIAEEHGIDPDGQCTAVQSKIQTDRLNVYFDE 35
>SB_26824| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 70
Score = 41.9 bits (94), Expect = 5e-04
Identities = 19/51 (37%), Positives = 30/51 (58%)
Frame = +1
Query: 520 IREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNE 672
+ ++YPD T +V PS D + PYN+ L++HQL E+ D I+N+
Sbjct: 21 LHDDYPDVYRFTTAVYPSAD-DDVITSPYNSVLAMHQLTEHADCVLPIENQ 70
>SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18)
Length = 553
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
Frame = +2
Query: 314 RPDNFVFGQSGAGNNWAKGHYTE-----GAELVDSVLDVVRKESESCDCLQG 454
R N + G+ G GNN+A G++ G L+ +D +RKE E CD G
Sbjct: 65 RDSNIIAGRRGRGNNFALGYHGNSIDEGGTSLLHMTMDAMRKEVERCDSFAG 116
>SB_16885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 37.9 bits (84), Expect = 0.008
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +1
Query: 571 SPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 678
S +SD VV+PYN+ L++ +L +N D +DN AL
Sbjct: 211 SEDISDVVVQPYNSILTLKRLTQNADCVVVLDNTAL 246
>SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2)
Length = 210
Score = 29.5 bits (63), Expect = 2.7
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -2
Query: 372 CPLAQLLPAPDCPKTKLSGRKICP 301
CPL ++L P CP K+ +CP
Sbjct: 18 CPLKEMLDTPLCPLKKMLNTPLCP 41
Score = 29.1 bits (62), Expect = 3.6
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 372 CPLAQLLPAPDCPKTKLSGRKICP 301
CPL ++L AP CP ++ +CP
Sbjct: 172 CPLKEMLDAPLCPLKEMLDTPLCP 195
Score = 27.9 bits (59), Expect = 8.4
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 372 CPLAQLLPAPDCPKTKLSGRKICP 301
CPL ++L P CP ++ +CP
Sbjct: 62 CPLKEMLDTPLCPLKEMLNTPLCP 85
>SB_50370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1059
Score = 29.1 bits (62), Expect = 3.6
Identities = 9/25 (36%), Positives = 18/25 (72%)
Frame = +1
Query: 511 ISKIREEYPDRIMNTYSVVPSPKVS 585
+ K++E+YPD I++++ + P K S
Sbjct: 484 LKKLQEQYPDHILSSFELFPCEKAS 508
>SB_50693| Best HMM Match : C2 (HMM E-Value=0)
Length = 1049
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -2
Query: 348 APDCPKTKLSGRKICPKGPERTESMVPGSKS 256
A DCP ++ +GR +CP P +S + +K+
Sbjct: 138 AVDCPTSRKNGRGLCPFPPPPLQSALKRAKA 168
>SB_37087| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +3
Query: 516 KDP*RVPRQNHEHILSSPLAQSIR 587
+D RV R+N HI+S+PL Q IR
Sbjct: 245 EDRGRVYRRNRRHIISTPLDQPIR 268
>SB_41962| Best HMM Match : RVT_1 (HMM E-Value=1.4e-18)
Length = 1052
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 528 RVPRQNHEHILSSPLAQSIR 587
RV R+N HI+S+PL Q IR
Sbjct: 971 RVYRRNRRHIISTPLDQPIR 990
>SB_28870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 528 RVPRQNHEHILSSPLAQSIR 587
RV R+N HI+S+PL Q IR
Sbjct: 78 RVYRRNRRHIISTPLDQPIR 97
>SB_14466| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1052
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 528 RVPRQNHEHILSSPLAQSIR 587
RV R+N HI+S+PL Q IR
Sbjct: 971 RVYRRNRRHIISTPLDQPIR 990
>SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -3
Query: 215 IVVYIDALQLQVRVPM-VGTGGVDAVLVGDDLPELSSN 105
I VY DA++LQV P+ G+D + V D EL +
Sbjct: 48 ITVYADAVELQVTYPLRAPLRGIDLITVYADAVELQGS 85
>SB_58050| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 307
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = +1
Query: 511 ISKIREEYPDRI-MNTYSVVPS-PKVSDTVVEPYNATLSVHQLVE 639
+SKI EY + + + + V+P PK+ D + +P+ L V QL+E
Sbjct: 24 VSKIILEYKEPMAICSQRVLPDWPKIGDRITQPFLDQLMVSQLLE 68
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,757,866
Number of Sequences: 59808
Number of extensions: 471436
Number of successful extensions: 1451
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1246
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1433
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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