Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20599
(700 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 149 2e-36
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 149 2e-36
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 149 2e-36
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 148 3e-36
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 147 7e-36
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 146 1e-35
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 145 2e-35
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 145 2e-35
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 144 4e-35
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 79 2e-15
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 79 2e-15
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 79 3e-15
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 79 4e-15
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 79 4e-15
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 79 4e-15
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 79 4e-15
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 62 3e-10
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 62 3e-10
At4g37190.1 68417.m05265 expressed protein 30 1.7
At2g31580.1 68415.m03858 expressed protein contains Pfam profi... 29 2.2
At2g28400.1 68415.m03451 expressed protein contains Pfam profile... 29 3.9
At2g24200.1 68415.m02891 cytosol aminopeptidase identical to cyt... 28 6.8
At3g15800.1 68416.m02000 glycosyl hydrolase family 17 protein si... 27 9.0
At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putati... 27 9.0
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 149 bits (360), Expect = 2e-36
Identities = 64/69 (92%), Positives = 69/69 (100%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 433
+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E
Sbjct: 66 MDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAE 125
Query: 434 SCDCLQGFQ 460
+CDCLQGFQ
Sbjct: 126 NCDCLQGFQ 134
Score = 118 bits (285), Expect = 3e-27
Identities = 56/67 (83%), Positives = 59/67 (88%)
Frame = +1
Query: 499 GHPLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 678
G LISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEAL
Sbjct: 148 GTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEAL 207
Query: 679 YDICFRT 699
YDICFRT
Sbjct: 208 YDICFRT 214
Score = 118 bits (283), Expect = 5e-27
Identities = 49/70 (70%), Positives = 59/70 (84%)
Frame = +3
Query: 60 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 239
MREI+H+Q GQCGNQIGAKFWE++ EHGID TG Y G++DLQLER+NVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60
Query: 240 PRAILSTWSP 269
PRA+L P
Sbjct: 61 PRAVLMDLEP 70
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 149 bits (360), Expect = 2e-36
Identities = 64/69 (92%), Positives = 69/69 (100%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 433
+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E
Sbjct: 66 MDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAE 125
Query: 434 SCDCLQGFQ 460
+CDCLQGFQ
Sbjct: 126 NCDCLQGFQ 134
Score = 120 bits (290), Expect = 7e-28
Identities = 53/70 (75%), Positives = 59/70 (84%)
Frame = +3
Query: 60 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 239
MREI+H+Q GQCGNQIGAKFWE+I EHGID TG GD+DLQLERINVY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYV 60
Query: 240 PRAILSTWSP 269
PRA+L P
Sbjct: 61 PRAVLMDLEP 70
Score = 119 bits (286), Expect = 2e-27
Identities = 56/67 (83%), Positives = 59/67 (88%)
Frame = +1
Query: 499 GHPLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 678
G LISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEAL
Sbjct: 148 GTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEAL 207
Query: 679 YDICFRT 699
YDICFRT
Sbjct: 208 YDICFRT 214
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 149 bits (360), Expect = 2e-36
Identities = 64/69 (92%), Positives = 69/69 (100%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 433
+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E
Sbjct: 66 MDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAE 125
Query: 434 SCDCLQGFQ 460
+CDCLQGFQ
Sbjct: 126 NCDCLQGFQ 134
Score = 119 bits (286), Expect = 2e-27
Identities = 56/67 (83%), Positives = 59/67 (88%)
Frame = +1
Query: 499 GHPLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 678
G LISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEAL
Sbjct: 148 GTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEAL 207
Query: 679 YDICFRT 699
YDICFRT
Sbjct: 208 YDICFRT 214
Score = 118 bits (284), Expect = 4e-27
Identities = 50/70 (71%), Positives = 60/70 (85%)
Frame = +3
Query: 60 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 239
MREI+H+Q GQCGNQIG+KFWE+++ EHGID TG Y GDS+LQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYV 60
Query: 240 PRAILSTWSP 269
PRA+L P
Sbjct: 61 PRAVLMDLEP 70
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 148 bits (359), Expect = 3e-36
Identities = 63/69 (91%), Positives = 69/69 (100%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 433
+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVVRKE+E
Sbjct: 67 MDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAE 126
Query: 434 SCDCLQGFQ 460
+CDCLQGFQ
Sbjct: 127 NCDCLQGFQ 135
Score = 122 bits (295), Expect = 2e-28
Identities = 54/71 (76%), Positives = 61/71 (85%), Gaps = 1/71 (1%)
Frame = +3
Query: 60 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGD-SDLQLERINVYYNEASGGKY 236
MREI+H+Q GQCGNQIG+KFWE+I DEHGID TG Y GD +DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRY 60
Query: 237 VPRAILSTWSP 269
VPRA+L P
Sbjct: 61 VPRAVLMDLEP 71
Score = 118 bits (285), Expect = 3e-27
Identities = 56/67 (83%), Positives = 59/67 (88%)
Frame = +1
Query: 499 GHPLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 678
G LISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEAL
Sbjct: 149 GTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEAL 208
Query: 679 YDICFRT 699
YDICFRT
Sbjct: 209 YDICFRT 215
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 147 bits (356), Expect = 7e-36
Identities = 62/69 (89%), Positives = 69/69 (100%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 433
+DLEPGTMDS+RSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVVRKE+E
Sbjct: 67 MDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAE 126
Query: 434 SCDCLQGFQ 460
+CDCLQGFQ
Sbjct: 127 NCDCLQGFQ 135
Score = 127 bits (306), Expect = 8e-30
Identities = 55/71 (77%), Positives = 63/71 (88%), Gaps = 1/71 (1%)
Frame = +3
Query: 60 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDS-DLQLERINVYYNEASGGKY 236
MREI+H+Q GQCGNQIG+KFWE+I DEHG+DPTG Y+GDS DLQLERINVYYNEASGG+Y
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRY 60
Query: 237 VPRAILSTWSP 269
VPRA+L P
Sbjct: 61 VPRAVLMDLEP 71
Score = 118 bits (285), Expect = 3e-27
Identities = 56/67 (83%), Positives = 59/67 (88%)
Frame = +1
Query: 499 GHPLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 678
G LISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEAL
Sbjct: 149 GTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEAL 208
Query: 679 YDICFRT 699
YDICFRT
Sbjct: 209 YDICFRT 215
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 146 bits (354), Expect = 1e-35
Identities = 62/69 (89%), Positives = 69/69 (100%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 433
+DLEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVVRKE+E
Sbjct: 66 MDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAE 125
Query: 434 SCDCLQGFQ 460
+CDCLQGFQ
Sbjct: 126 NCDCLQGFQ 134
Score = 124 bits (300), Expect = 4e-29
Identities = 53/70 (75%), Positives = 61/70 (87%)
Frame = +3
Query: 60 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 239
MREI+H+Q GQCGNQIG+KFWE++ DEHGIDPTG Y G+SDLQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60
Query: 240 PRAILSTWSP 269
PRAIL P
Sbjct: 61 PRAILMDLEP 70
Score = 118 bits (285), Expect = 3e-27
Identities = 56/67 (83%), Positives = 59/67 (88%)
Frame = +1
Query: 499 GHPLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 678
G LISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEAL
Sbjct: 148 GTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEAL 207
Query: 679 YDICFRT 699
YDICFRT
Sbjct: 208 YDICFRT 214
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 145 bits (352), Expect = 2e-35
Identities = 62/69 (89%), Positives = 68/69 (98%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 433
+DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E
Sbjct: 66 MDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAE 125
Query: 434 SCDCLQGFQ 460
+CDCLQGFQ
Sbjct: 126 NCDCLQGFQ 134
Score = 123 bits (297), Expect = 1e-28
Identities = 53/70 (75%), Positives = 60/70 (85%)
Frame = +3
Query: 60 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 239
MREI+H+Q GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 240 PRAILSTWSP 269
PRA+L P
Sbjct: 61 PRAVLMDLEP 70
Score = 118 bits (285), Expect = 3e-27
Identities = 56/67 (83%), Positives = 59/67 (88%)
Frame = +1
Query: 499 GHPLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 678
G LISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEAL
Sbjct: 148 GTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEAL 207
Query: 679 YDICFRT 699
YDICFRT
Sbjct: 208 YDICFRT 214
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 145 bits (352), Expect = 2e-35
Identities = 62/69 (89%), Positives = 68/69 (98%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 433
+DLEPGTMDS+RSGP+GQ FRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E
Sbjct: 66 MDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAE 125
Query: 434 SCDCLQGFQ 460
+CDCLQGFQ
Sbjct: 126 NCDCLQGFQ 134
Score = 123 bits (297), Expect = 1e-28
Identities = 53/70 (75%), Positives = 60/70 (85%)
Frame = +3
Query: 60 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 239
MREI+H+Q GQCGNQIGAKFWE++ EHGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 240 PRAILSTWSP 269
PRA+L P
Sbjct: 61 PRAVLMDLEP 70
Score = 118 bits (285), Expect = 3e-27
Identities = 56/67 (83%), Positives = 59/67 (88%)
Frame = +1
Query: 499 GHPLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 678
G LISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEAL
Sbjct: 148 GTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEAL 207
Query: 679 YDICFRT 699
YDICFRT
Sbjct: 208 YDICFRT 214
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 144 bits (350), Expect = 4e-35
Identities = 63/69 (91%), Positives = 68/69 (98%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 433
+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+E
Sbjct: 66 MDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAE 125
Query: 434 SCDCLQGFQ 460
+ DCLQGFQ
Sbjct: 126 NSDCLQGFQ 134
Score = 123 bits (296), Expect = 1e-28
Identities = 54/70 (77%), Positives = 60/70 (85%)
Frame = +3
Query: 60 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 239
MREI+H+Q GQCGNQIGAKFWE+I DEHGID TG Y GDS LQLERI+VY+NEASGGKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYV 60
Query: 240 PRAILSTWSP 269
PRA+L P
Sbjct: 61 PRAVLMDLEP 70
Score = 119 bits (286), Expect = 2e-27
Identities = 56/67 (83%), Positives = 59/67 (88%)
Frame = +1
Query: 499 GHPLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 678
G LISKIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE +DNEAL
Sbjct: 148 GTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEAL 207
Query: 679 YDICFRT 699
YDICFRT
Sbjct: 208 YDICFRT 214
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 79.4 bits (187), Expect = 2e-15
Identities = 34/68 (50%), Positives = 48/68 (70%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 433
+DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD VRK ++
Sbjct: 68 VDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLAD 127
Query: 434 SCDCLQGF 457
+C LQGF
Sbjct: 128 NCTGLQGF 135
Score = 69.7 bits (163), Expect = 2e-12
Identities = 30/67 (44%), Positives = 45/67 (67%)
Frame = +1
Query: 499 GHPLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 678
G L+ ++ +Y + +++ PSP+VS VVEPYN+ LS H L+E+TD +DNEA+
Sbjct: 150 GSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAI 209
Query: 679 YDICFRT 699
YDIC R+
Sbjct: 210 YDICRRS 216
Score = 60.1 bits (139), Expect = 1e-09
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = +3
Query: 60 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 233
MREI+ + GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 234 YVPRAILSTWSP 269
+VPRA+ P
Sbjct: 61 HVPRAVFVDLEP 72
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 79.4 bits (187), Expect = 2e-15
Identities = 34/68 (50%), Positives = 48/68 (70%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 433
+DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD VRK ++
Sbjct: 68 VDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLAD 127
Query: 434 SCDCLQGF 457
+C LQGF
Sbjct: 128 NCTGLQGF 135
Score = 69.7 bits (163), Expect = 2e-12
Identities = 30/67 (44%), Positives = 45/67 (67%)
Frame = +1
Query: 499 GHPLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 678
G L+ ++ +Y + +++ PSP+VS VVEPYN+ LS H L+E+TD +DNEA+
Sbjct: 150 GSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAI 209
Query: 679 YDICFRT 699
YDIC R+
Sbjct: 210 YDICRRS 216
Score = 60.1 bits (139), Expect = 1e-09
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = +3
Query: 60 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 233
MREI+ + GQ G Q+G WE+ EHGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 234 YVPRAILSTWSP 269
+VPRA+ P
Sbjct: 61 HVPRAVFVDLEP 72
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 79.0 bits (186), Expect = 3e-15
Identities = 33/68 (48%), Positives = 49/68 (72%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 433
LDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD+ L+ +RK ++
Sbjct: 68 LDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLERLRKLAD 127
Query: 434 SCDCLQGF 457
+C LQGF
Sbjct: 128 NCTGLQGF 135
Score = 68.1 bits (159), Expect = 5e-12
Identities = 29/67 (43%), Positives = 45/67 (67%)
Frame = +1
Query: 499 GHPLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 678
G L+ ++ ++ + +++ PSP+VS VVEPYN+ LS H L+E+TD +DNEA+
Sbjct: 150 GSLLLERLSVDFGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVVVLLDNEAI 209
Query: 679 YDICFRT 699
YDIC R+
Sbjct: 210 YDICRRS 216
Score = 60.9 bits (141), Expect = 8e-10
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = +3
Query: 60 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGK 233
MREI+ + GQ G Q+G WE+ EHGI P G DS + + N +++E S G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 234 YVPRAILSTWSP 269
+VPRA+ P
Sbjct: 61 HVPRAVFLDLEP 72
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 78.6 bits (185), Expect = 4e-15
Identities = 33/68 (48%), Positives = 48/68 (70%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 433
+DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK ++
Sbjct: 68 VDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLAD 127
Query: 434 SCDCLQGF 457
+C LQGF
Sbjct: 128 NCTGLQGF 135
Score = 70.9 bits (166), Expect = 7e-13
Identities = 31/67 (46%), Positives = 47/67 (70%)
Frame = +1
Query: 499 GHPLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 678
G L+ ++ +Y + ++V PSP+VS +VVEPYN+ LS H L+E+TD + +DNEA+
Sbjct: 150 GSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAI 209
Query: 679 YDICFRT 699
YDIC R+
Sbjct: 210 YDICRRS 216
Score = 57.6 bits (133), Expect = 7e-09
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +3
Query: 60 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 233
MRE + + GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 234 YVPRAILSTWSP 269
+VPRA+ P
Sbjct: 61 HVPRAVFVDLEP 72
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 78.6 bits (185), Expect = 4e-15
Identities = 33/68 (48%), Positives = 48/68 (70%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 433
+DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK ++
Sbjct: 68 VDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLAD 127
Query: 434 SCDCLQGF 457
+C LQGF
Sbjct: 128 NCTGLQGF 135
Score = 70.9 bits (166), Expect = 7e-13
Identities = 31/67 (46%), Positives = 47/67 (70%)
Frame = +1
Query: 499 GHPLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 678
G L+ ++ +Y + ++V PSP+VS +VVEPYN+ LS H L+E+TD + +DNEA+
Sbjct: 150 GSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAI 209
Query: 679 YDICFRT 699
YDIC R+
Sbjct: 210 YDICRRS 216
Score = 57.6 bits (133), Expect = 7e-09
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +3
Query: 60 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 233
MRE + + GQ G Q+G WE+ EHGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 234 YVPRAILSTWSP 269
+VPRA+ P
Sbjct: 61 HVPRAVFVDLEP 72
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 78.6 bits (185), Expect = 4e-15
Identities = 33/68 (48%), Positives = 48/68 (70%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 433
+DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK ++
Sbjct: 68 VDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLAD 127
Query: 434 SCDCLQGF 457
+C LQGF
Sbjct: 128 NCTGLQGF 135
Score = 70.9 bits (166), Expect = 7e-13
Identities = 31/67 (46%), Positives = 47/67 (70%)
Frame = +1
Query: 499 GHPLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 678
G L+ ++ +Y + ++V PSP+VS +VVEPYN+ LS H L+E+TD + +DNEA+
Sbjct: 150 GSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAI 209
Query: 679 YDICFRT 699
YDIC R+
Sbjct: 210 YDICRRS 216
Score = 55.2 bits (127), Expect = 4e-08
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +3
Query: 60 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 233
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 234 YVPRAILSTWSP 269
+VPRA+ P
Sbjct: 61 HVPRAVFVDLEP 72
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 78.6 bits (185), Expect = 4e-15
Identities = 33/68 (48%), Positives = 48/68 (70%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 433
+DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD LD +RK ++
Sbjct: 68 VDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLAD 127
Query: 434 SCDCLQGF 457
+C LQGF
Sbjct: 128 NCTGLQGF 135
Score = 70.9 bits (166), Expect = 7e-13
Identities = 31/67 (46%), Positives = 47/67 (70%)
Frame = +1
Query: 499 GHPLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 678
G L+ ++ +Y + ++V PSP+VS +VVEPYN+ LS H L+E+TD + +DNEA+
Sbjct: 150 GSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAI 209
Query: 679 YDICFRT 699
YDIC R+
Sbjct: 210 YDICRRS 216
Score = 55.2 bits (127), Expect = 4e-08
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +3
Query: 60 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 233
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 234 YVPRAILSTWSP 269
+VPRA+ P
Sbjct: 61 HVPRAVFVDLEP 72
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 62.5 bits (145), Expect = 3e-10
Identities = 29/69 (42%), Positives = 41/69 (59%)
Frame = +3
Query: 63 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 242
REI+ LQ GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 243 RAILSTWSP 269
RA+L P
Sbjct: 63 RALLIDLEP 71
Score = 54.8 bits (126), Expect = 5e-08
Identities = 22/70 (31%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVVRKE 427
+DLEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D++ +E
Sbjct: 67 IDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASG-YHQGKGVEEEIMDMIDRE 125
Query: 428 SESCDCLQGF 457
++ D L+GF
Sbjct: 126 ADGSDSLEGF 135
Score = 48.8 bits (111), Expect = 3e-06
Identities = 23/61 (37%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Frame = +1
Query: 499 GHPLISKIREEYPDRIMNTYSVVPSP-KVSDTVVEPYNATLSVHQLVENTDETYCIDNEA 675
G L+ + + Y +++ TYSV P+ + SD VV+PYN+ L++ +L N D +DN A
Sbjct: 150 GSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTA 209
Query: 676 L 678
L
Sbjct: 210 L 210
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 62.5 bits (145), Expect = 3e-10
Identities = 29/69 (42%), Positives = 41/69 (59%)
Frame = +3
Query: 63 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 242
REI+ LQ GQCGNQIG +FW+ + EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 243 RAILSTWSP 269
RA+L P
Sbjct: 63 RALLIDLEP 71
Score = 54.4 bits (125), Expect = 7e-08
Identities = 22/70 (31%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Frame = +2
Query: 254 LDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVVRKE 427
+DLEP ++ +++G + ++ +N GAGNNWA G Y +G + + ++D++ +E
Sbjct: 67 IDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASG-YHQGKGVEEEIMDMIDRE 125
Query: 428 SESCDCLQGF 457
++ D L+GF
Sbjct: 126 ADGSDSLEGF 135
Score = 48.8 bits (111), Expect = 3e-06
Identities = 23/61 (37%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Frame = +1
Query: 499 GHPLISKIREEYPDRIMNTYSVVPSP-KVSDTVVEPYNATLSVHQLVENTDETYCIDNEA 675
G L+ + + Y +++ TYSV P+ + SD VV+PYN+ L++ +L N D +DN A
Sbjct: 150 GSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTA 209
Query: 676 L 678
L
Sbjct: 210 L 210
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 60 MREIVHLQAGQCGNQIGAKFWEIISDEHGI 149
MREIV +Q G+ N +G+ FW + G+
Sbjct: 1 MREIVTIQVGEFANFVGSHFWNFQDELLGL 30
>At2g31580.1 68415.m03858 expressed protein contains Pfam profile:
PF04446 family of unknown function (DUF549)
Length = 567
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/22 (59%), Positives = 19/22 (86%)
Frame = +2
Query: 392 LVDSVLDVVRKESESCDCLQGF 457
+++SV VVRKE+E+C+CLQ F
Sbjct: 1 MINSV-GVVRKEAENCNCLQVF 21
>At2g28400.1 68415.m03451 expressed protein contains Pfam profile
PF04520: Protein of unknown function, DUF584
Length = 162
Score = 28.7 bits (61), Expect = 3.9
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 59 NEGNRSSTGRPMW*PDWS*VLGDHLRRAR 145
++ ++++ P+ PDWS +LGD RR R
Sbjct: 68 SDSGKAASSLPVNVPDWSKILGDESRRQR 96
>At2g24200.1 68415.m02891 cytosol aminopeptidase identical to
cytosol aminopeptidase SP:P30184 from [Arabidopsis
thaliana]; contains Pfam profiles: PF00883 cytosol
aminopeptidase family catalytic domain, PF02789: cytosol
aminopeptidase family N-terminal domain
Length = 520
Score = 27.9 bits (59), Expect = 6.8
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Frame = -1
Query: 406 DRVNELSTL---CVVSLGPVVAGAGLSEDEVVR-TEDLSERSG 290
D++ +L+TL CV++LG +AG DE+ + SERSG
Sbjct: 393 DKIVDLATLTGACVIALGTSMAGIYTPSDELAKEVIAASERSG 435
>At3g15800.1 68416.m02000 glycosyl hydrolase family 17 protein
similar to elicitor inducible chitinase Nt-SubE76
GI:11071974 from [Nicotiana tabacum]
Length = 399
Score = 27.5 bits (58), Expect = 9.0
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = -3
Query: 263 PSREDGAGHVLAAGGFI--VVYIDALQLQVRVPMVGTGGVDAVLVGDDLPELSSNLVTTL 90
P R+ H++ + F+ ++ L Q V +GT GV+ + D+LP S + V TL
Sbjct: 6 PLRKSPTSHMVFSSFFLSFLLVFSILSSQTAVAFIGTYGVNYGRIADNLP--SPDAVATL 63
>At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putative
similar to (1-4)-beta-mannan endohydrolase [Coffea
arabica] GI:10178872, (1-4)-beta-mannan endohydrolase
GB:AAB87859 [Lycopersicon esculentum]; contains Pfam
profile PF00150: Cellulase (glycosyl hydrolase family 5)
Length = 408
Score = 27.5 bits (58), Expect = 9.0
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +3
Query: 66 EIVHLQAGQCGNQIGAKFWEIISD 137
+I++ A + G+ GA FWE+IS+
Sbjct: 346 DIIYASAQKGGSAAGALFWEVISE 369
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,854,358
Number of Sequences: 28952
Number of extensions: 320586
Number of successful extensions: 990
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 932
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 979
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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