Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20598
         (591 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    24   1.1  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    24   1.1  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   3.4  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   5.9  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   7.8  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    21   7.8  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   7.8  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   7.8  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   7.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   7.8  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   7.8  

>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -3

Query: 106 HTESSLRSPFTEPKTSNMAGARRVGRGREY 17
           HT  +   P+    T    G  R+ RGR+Y
Sbjct: 321 HTTVNEAQPYVRNTTVPTQGVARMSRGRQY 350


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -3

Query: 106 HTESSLRSPFTEPKTSNMAGARRVGRGREY 17
           HT  +   P+    T    G  R+ RGR+Y
Sbjct: 269 HTTVNEAQPYVRNTTVPTQGVARMSRGRQY 298


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 10  HVRTHDRDRRAARPPC 57
           H+RTH  ++R A P C
Sbjct: 365 HLRTHTGEKRFACPIC 380


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 10/39 (25%), Positives = 20/39 (51%)
 Frame = -3

Query: 292 KSVRDGESRVYPAYVSITASGISSTMQSIGSPMYCRDVT 176
           +++R    R+  AYV+ T + I   + +    ++C  VT
Sbjct: 281 RNIRGPRKRLRFAYVTRTGANIKKLIVNTWISLFCVKVT 319


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 5/24 (20%), Positives = 13/24 (54%)
 Frame = +2

Query: 359 VKYHKYYQWVCFVLFFQAILFYVP 430
           +++H  ++W  ++      LF +P
Sbjct: 174 IEFHPQWKWQVYMTLVSLSLFIIP 197


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
          protein.
          Length = 136

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 7  AHVRTHDRDRRAARPPC 57
          AHVRTH  ++    P C
Sbjct: 39 AHVRTHSGEKPFRCPVC 55


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -1

Query: 144 WLCNVSGTHCC 112
           WL N+S T+ C
Sbjct: 135 WLINISATYIC 145


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -1

Query: 144 WLCNVSGTHCC 112
           WL N+S T+ C
Sbjct: 368 WLINISATYIC 378


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 7   AHVRTHDRDRRAARPPC 57
           AHVRTH  ++    P C
Sbjct: 295 AHVRTHSGEKPFRCPVC 311


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -1

Query: 144 WLCNVSGTHCC 112
           WL N+S T+ C
Sbjct: 368 WLINISATYIC 378


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 11/50 (22%), Positives = 21/50 (42%)
 Frame = -3

Query: 313 ILSDAADKSVRDGESRVYPAYVSITASGISSTMQSIGSPMYCRDVTRSEN 164
           I ++   + V D E+  +  Y+ +       T+ SIG       +  S+N
Sbjct: 145 IFNEETKRLVEDLEAECHKPYIDVVVPITQFTLLSIGETAMGIKLNASDN 194


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,612
Number of Sequences: 336
Number of extensions: 3186
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14830622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)