Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20598
(591 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z50755-1|CAB61030.2| 386|Caenorhabditis elegans Hypothetical pr... 48 7e-06
U93195-1|AAB51534.1| 386|Caenorhabditis elegans UNC-9 protein. 48 7e-06
Z69658-2|CAB60997.1| 389|Caenorhabditis elegans Hypothetical pr... 44 8e-05
U59213-1|AAB09672.1| 363|Caenorhabditis elegans transmembrane p... 44 8e-05
AF067219-6|AAC17030.1| 382|Caenorhabditis elegans Innexin prote... 44 8e-05
AF067607-11|AAM81119.1| 412|Caenorhabditis elegans Innexin prot... 44 1e-04
AF067607-10|AAM81118.1| 436|Caenorhabditis elegans Innexin prot... 44 1e-04
AF067219-7|AAC17026.2| 372|Caenorhabditis elegans Innexin prote... 43 2e-04
AF303262-1|AAG50220.1| 362|Caenorhabditis elegans gap junction ... 42 3e-04
AF067219-9|AAX88822.1| 266|Caenorhabditis elegans Innexin prote... 42 3e-04
AF067219-8|AAC17025.1| 362|Caenorhabditis elegans Innexin prote... 42 3e-04
Z70685-1|CAA94607.1| 522|Caenorhabditis elegans Hypothetical pr... 41 6e-04
Z19122-1|CAA79529.1| 522|Caenorhabditis elegans hypothetical po... 41 6e-04
AF040656-3|AAB95049.1| 385|Caenorhabditis elegans Innexin prote... 41 6e-04
U59212-1|AAB09671.1| 428|Caenorhabditis elegans transmembrane p... 41 8e-04
U39677-5|AAN71843.1| 383|Caenorhabditis elegans Innexin protein... 41 8e-04
U39677-4|AAN71842.1| 428|Caenorhabditis elegans Innexin protein... 41 8e-04
U97404-1|AAB93310.1| 408|Caenorhabditis elegans Innexin protein... 40 0.001
U64859-3|AAC69093.2| 447|Caenorhabditis elegans Innexin protein... 40 0.001
AF068716-8|AAC17749.1| 554|Caenorhabditis elegans Innexin prote... 39 0.003
Z83240-3|CAB05813.2| 483|Caenorhabditis elegans Hypothetical pr... 38 0.004
Z75552-3|CAA99940.1| 465|Caenorhabditis elegans Hypothetical pr... 38 0.004
Z71259-7|CAA95793.1| 423|Caenorhabditis elegans Hypothetical pr... 38 0.004
U59210-1|AAB09669.1| 423|Caenorhabditis elegans EAT-5 protein. 38 0.004
U59211-1|AAB09670.1| 420|Caenorhabditis elegans embryonic membr... 38 0.005
U53343-3|AAA96220.2| 420|Caenorhabditis elegans Innexin protein... 38 0.005
Z66561-7|CAB54206.2| 419|Caenorhabditis elegans Hypothetical pr... 36 0.016
AF304127-1|AAG50240.1| 419|Caenorhabditis elegans innexin protein. 36 0.016
AF063009-2|AAO21399.1| 438|Caenorhabditis elegans Innexin prote... 36 0.016
AF063009-1|AAM45360.1| 454|Caenorhabditis elegans Innexin prote... 36 0.016
U41746-5|AAT81186.1| 492|Caenorhabditis elegans Innexin protein... 36 0.022
U41746-4|AAA83332.1| 559|Caenorhabditis elegans Innexin protein... 36 0.022
U41558-3|AAK39244.1| 556|Caenorhabditis elegans Innexin protein... 36 0.022
AC024791-35|AAF60675.2| 462|Caenorhabditis elegans Innexin prot... 35 0.038
Z72506-2|CAA96621.1| 434|Caenorhabditis elegans Hypothetical pr... 31 0.81
Z72506-1|CAA96618.1| 432|Caenorhabditis elegans Hypothetical pr... 31 0.81
Z68302-5|CAA92633.2| 382|Caenorhabditis elegans Hypothetical pr... 31 0.81
U58734-5|AAB52504.3| 870|Caenorhabditis elegans Hypothetical pr... 31 0.81
Z68302-1|CAA92634.2| 382|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z81536-4|CAB04364.1| 310|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z81142-3|CAB03505.1| 491|Caenorhabditis elegans Hypothetical pr... 28 5.7
U67951-2|AAB07570.2| 302|Caenorhabditis elegans Regulator of fu... 27 7.5
U67951-1|AAQ65207.1| 315|Caenorhabditis elegans Regulator of fu... 27 7.5
U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya bind... 27 7.5
AY115477-1|AAM55473.1| 303|Caenorhabditis elegans zinc finger p... 27 7.5
AF519108-1|AAM74222.1| 909|Caenorhabditis elegans EOR-1 protein. 27 7.5
AF502568-1|AAM74151.1| 909|Caenorhabditis elegans EOR-1 protein. 27 7.5
AF100669-8|AAK39268.1| 909|Caenorhabditis elegans Egl-1 suppres... 27 7.5
U58749-5|AAU05597.1| 1551|Caenorhabditis elegans Hypothetical pr... 27 10.0
U58749-4|AAU05598.1| 1592|Caenorhabditis elegans Hypothetical pr... 27 10.0
>Z50755-1|CAB61030.2| 386|Caenorhabditis elegans Hypothetical
protein R12H7.1 protein.
Length = 386
Score = 47.6 bits (108), Expect = 7e-06
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 8/76 (10%)
Frame = +2
Query: 257 WIYSTFTIPNRLIGR----VXKDYVQP--GVGPHVEGQDEVKYHKYYQWVCFVLFFQAIL 418
W+ +TFT P V Y P PH + E + YYQWV FVL +A+L
Sbjct: 56 WVPATFTEPMEQYTENYCWVQNTYFLPLHDYIPHNYAERENRQIGYYQWVPFVLALEALL 115
Query: 419 FYVPRYLWK--TWEGG 460
FYVP +W+ +W+ G
Sbjct: 116 FYVPTIVWRLLSWQSG 131
Score = 38.3 bits (85), Expect = 0.004
Identities = 17/48 (35%), Positives = 29/48 (60%)
Frame = +3
Query: 111 DNNVFRLHYKATVIILIAFSLLVTSRQYIGDPIDCIVDEIPLAVMDTY 254
D+ + +L+Y T I+ F++LV+++QY+G PI C V M+ Y
Sbjct: 21 DDIIDKLNYYYTTAIITVFAILVSAKQYVGFPIQCWVPATFTEPMEQY 68
>U93195-1|AAB51534.1| 386|Caenorhabditis elegans UNC-9 protein.
Length = 386
Score = 47.6 bits (108), Expect = 7e-06
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 8/76 (10%)
Frame = +2
Query: 257 WIYSTFTIPNRLIGR----VXKDYVQP--GVGPHVEGQDEVKYHKYYQWVCFVLFFQAIL 418
W+ +TFT P V Y P PH + E + YYQWV FVL +A+L
Sbjct: 56 WVPATFTEPMEQYTENYCWVQNTYFLPLHDYIPHNYAERENRQIGYYQWVPFVLALEALL 115
Query: 419 FYVPRYLWK--TWEGG 460
FYVP +W+ +W+ G
Sbjct: 116 FYVPTIVWRLLSWQSG 131
Score = 38.3 bits (85), Expect = 0.004
Identities = 17/48 (35%), Positives = 29/48 (60%)
Frame = +3
Query: 111 DNNVFRLHYKATVIILIAFSLLVTSRQYIGDPIDCIVDEIPLAVMDTY 254
D+ + +L+Y T I+ F++LV+++QY+G PI C V M+ Y
Sbjct: 21 DDIIDKLNYYYTTAIITVFAILVSAKQYVGFPIQCWVPATFTEPMEQY 68
>Z69658-2|CAB60997.1| 389|Caenorhabditis elegans Hypothetical
protein C36H8.2 protein.
Length = 389
Score = 44.0 bits (99), Expect = 8e-05
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +2
Query: 371 KYYQWVCFVLFFQAILFYVPRYLWK 445
+YYQWV +V QA LFY+PR++WK
Sbjct: 103 QYYQWVPYVFALQAFLFYIPRFIWK 127
Score = 34.3 bits (75), Expect = 0.066
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +3
Query: 126 RLHYKATVIILIAFSLLVTSRQYIGDPIDC 215
RL+ + TV+IL S L+ S +IGDPI C
Sbjct: 29 RLNSRVTVVILAVSSALLLSSHFIGDPITC 58
>U59213-1|AAB09672.1| 363|Caenorhabditis elegans transmembrane
protein protein.
Length = 363
Score = 44.0 bits (99), Expect = 8e-05
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +2
Query: 371 KYYQWVCFVLFFQAILFYVPRYLWK 445
+YYQWV +V QA LFY+PR++WK
Sbjct: 77 QYYQWVPYVFALQAFLFYIPRFIWK 101
Score = 34.3 bits (75), Expect = 0.066
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +3
Query: 126 RLHYKATVIILIAFSLLVTSRQYIGDPIDC 215
RL+ + TV+IL S L+ S +IGDPI C
Sbjct: 3 RLNSRVTVVILAVSSALLLSSHFIGDPITC 32
>AF067219-6|AAC17030.1| 382|Caenorhabditis elegans Innexin protein
15 protein.
Length = 382
Score = 44.0 bits (99), Expect = 8e-05
Identities = 24/61 (39%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
Frame = +2
Query: 302 VXKDYVQPGVGPHV--EGQDEVKYHKYYQWVCFVLFFQAILFYVPRYLWKT---WEGGRI 466
+ Y P P++ E E K YYQWV F+L F A LFY+P W T W G ++
Sbjct: 72 IENTYYVPLEDPNMPPERYREEKELSYYQWVQFILVFLAFLFYLPYLYWSTVNWWSGLQV 131
Query: 467 K 469
K
Sbjct: 132 K 132
>AF067607-11|AAM81119.1| 412|Caenorhabditis elegans Innexin protein
18, isoform b protein.
Length = 412
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/48 (39%), Positives = 31/48 (64%)
Frame = +3
Query: 111 DNNVFRLHYKATVIILIAFSLLVTSRQYIGDPIDCIVDEIPLAVMDTY 254
D+ V RLHY T +++ F++LV+++QY+G PI+C V M+ Y
Sbjct: 25 DDFVDRLHYLYTSTMVLMFAVLVSAKQYVGHPIECFVPAQFTRAMEQY 72
Score = 36.7 bits (81), Expect = 0.012
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +2
Query: 335 PHVEGQDEVKYHKYYQWVCFVLFFQAILFYVPRYLWKTWEG 457
PH E + YYQWV FVL A+ F++P +W+ G
Sbjct: 92 PHRLDDRERRQIGYYQWVPFVLAVAALTFHIPSSVWRMLAG 132
>AF067607-10|AAM81118.1| 436|Caenorhabditis elegans Innexin protein
18, isoform a protein.
Length = 436
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/48 (39%), Positives = 31/48 (64%)
Frame = +3
Query: 111 DNNVFRLHYKATVIILIAFSLLVTSRQYIGDPIDCIVDEIPLAVMDTY 254
D+ V RLHY T +++ F++LV+++QY+G PI+C V M+ Y
Sbjct: 25 DDFVDRLHYLYTSTMVLMFAVLVSAKQYVGHPIECFVPAQFTRAMEQY 72
Score = 36.7 bits (81), Expect = 0.012
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +2
Query: 335 PHVEGQDEVKYHKYYQWVCFVLFFQAILFYVPRYLWKTWEG 457
PH E + YYQWV FVL A+ F++P +W+ G
Sbjct: 92 PHRLDDRERRQIGYYQWVPFVLAVAALTFHIPSSVWRMLAG 132
>AF067219-7|AAC17026.2| 372|Caenorhabditis elegans Innexin protein
16 protein.
Length = 372
Score = 42.7 bits (96), Expect = 2e-04
Identities = 17/35 (48%), Positives = 26/35 (74%)
Frame = +3
Query: 111 DNNVFRLHYKATVIILIAFSLLVTSRQYIGDPIDC 215
D ++ RL+Y T ILIAFSLL+ ++ Y+G+P+ C
Sbjct: 22 DTSIDRLNYVVTTSILIAFSLLLFAKNYVGEPMQC 56
Score = 36.7 bits (81), Expect = 0.012
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +2
Query: 374 YYQWVCFVLFFQAILFYVPRYLW 442
YYQWV F+L QA+ F VPR W
Sbjct: 102 YYQWVPFLLVIQALFFCVPRAFW 124
>AF303262-1|AAG50220.1| 362|Caenorhabditis elegans gap junction
innexin protein.
Length = 362
Score = 41.9 bits (94), Expect = 3e-04
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = +2
Query: 356 EVKYHKYYQWVCFVLFFQAILFYVPRYLW 442
E K KYYQWV F+LF A++ Y+PR +W
Sbjct: 92 ENKELKYYQWVPFILFGLAVVIYIPRVIW 120
Score = 29.9 bits (64), Expect = 1.4
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 126 RLHYKATVIILIAFSLLVTSRQYIGDPIDC 215
RL Y TV +L + + + ++QY+G I C
Sbjct: 23 RLRYYFTVFLLTSSAFFIMAKQYVGQSIQC 52
>AF067219-9|AAX88822.1| 266|Caenorhabditis elegans Innexin protein
17, isoform b protein.
Length = 266
Score = 41.9 bits (94), Expect = 3e-04
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = +2
Query: 356 EVKYHKYYQWVCFVLFFQAILFYVPRYLW 442
E K KYYQWV F+LF A++ Y+PR +W
Sbjct: 92 ENKELKYYQWVPFILFGLAVVIYIPRVIW 120
Score = 29.9 bits (64), Expect = 1.4
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 126 RLHYKATVIILIAFSLLVTSRQYIGDPIDC 215
RL Y TV +L + + + ++QY+G I C
Sbjct: 23 RLRYYFTVFLLTSSAFFIMAKQYVGQSIQC 52
>AF067219-8|AAC17025.1| 362|Caenorhabditis elegans Innexin protein
17, isoform a protein.
Length = 362
Score = 41.9 bits (94), Expect = 3e-04
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = +2
Query: 356 EVKYHKYYQWVCFVLFFQAILFYVPRYLW 442
E K KYYQWV F+LF A++ Y+PR +W
Sbjct: 92 ENKELKYYQWVPFILFGLAVVIYIPRVIW 120
Score = 29.9 bits (64), Expect = 1.4
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 126 RLHYKATVIILIAFSLLVTSRQYIGDPIDC 215
RL Y TV +L + + + ++QY+G I C
Sbjct: 23 RLRYYFTVFLLTSSAFFIMAKQYVGQSIQC 52
>Z70685-1|CAA94607.1| 522|Caenorhabditis elegans Hypothetical
protein R07D5.1 protein.
Length = 522
Score = 41.1 bits (92), Expect = 6e-04
Identities = 20/48 (41%), Positives = 30/48 (62%)
Frame = +3
Query: 111 DNNVFRLHYKATVIILIAFSLLVTSRQYIGDPIDCIVDEIPLAVMDTY 254
D+ V +L+Y T IL +F+LLV+++QY+G PI C V M+ Y
Sbjct: 139 DDFVDKLNYYYTTTILASFALLVSAKQYVGFPIQCWVPATFTDAMEQY 186
Score = 40.7 bits (91), Expect = 8e-04
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +2
Query: 374 YYQWVCFVLFFQAILFYVPRYLWK 445
YYQWV F+L +A+LFYVP LW+
Sbjct: 219 YYQWVPFILAIEALLFYVPCILWR 242
>Z19122-1|CAA79529.1| 522|Caenorhabditis elegans hypothetical
polypeptide protein.
Length = 522
Score = 41.1 bits (92), Expect = 6e-04
Identities = 20/48 (41%), Positives = 30/48 (62%)
Frame = +3
Query: 111 DNNVFRLHYKATVIILIAFSLLVTSRQYIGDPIDCIVDEIPLAVMDTY 254
D+ V +L+Y T IL +F+LLV+++QY+G PI C V M+ Y
Sbjct: 139 DDFVDKLNYYYTTTILASFALLVSAKQYVGFPIQCWVPATFTDAMEQY 186
Score = 40.7 bits (91), Expect = 8e-04
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +2
Query: 374 YYQWVCFVLFFQAILFYVPRYLWK 445
YYQWV F+L +A+LFYVP LW+
Sbjct: 219 YYQWVPFILAIEALLFYVPCILWR 242
>AF040656-3|AAB95049.1| 385|Caenorhabditis elegans Innexin protein
13 protein.
Length = 385
Score = 41.1 bits (92), Expect = 6e-04
Identities = 20/54 (37%), Positives = 35/54 (64%)
Frame = +3
Query: 54 MFDVFGSVKGLLKLDSVCIDNNVFRLHYKATVIILIAFSLLVTSRQYIGDPIDC 215
MF + +KGL K D+++ RL+Y T ++L+ F+L ++++QY+G PI C
Sbjct: 1 MFFLDAFLKGLHKQGD---DDSIDRLNYYWTPMLLVIFALTLSAKQYVGQPIQC 51
Score = 40.3 bits (90), Expect = 0.001
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +2
Query: 374 YYQWVCFVLFFQAILFYVPRYLWK 445
YYQWV F+L QAILFY+P W+
Sbjct: 97 YYQWVPFILGLQAILFYLPSLFWR 120
>U59212-1|AAB09671.1| 428|Caenorhabditis elegans transmembrane
protein protein.
Length = 428
Score = 40.7 bits (91), Expect = 8e-04
Identities = 20/52 (38%), Positives = 32/52 (61%)
Frame = +3
Query: 111 DNNVFRLHYKATVIILIAFSLLVTSRQYIGDPIDCIVDEIPLAVMDTYAGYT 266
D+ V +L+Y T I+ AF+++V+++QY+G PI C V P D + YT
Sbjct: 19 DDFVDKLNYHYTSAIIFAFAIIVSAKQYVGYPIQCWV---PAQFTDAWEQYT 67
Score = 38.7 bits (86), Expect = 0.003
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 347 GQDEVKYHKYYQWVCFVLFFQAILFYVPRYLWK 445
G + YYQWV FVL +A+ FY+P +W+
Sbjct: 90 GDRRARQISYYQWVPFVLALEALCFYIPCIMWR 122
>U39677-5|AAN71843.1| 383|Caenorhabditis elegans Innexin protein 1,
isoform b protein.
Length = 383
Score = 40.7 bits (91), Expect = 8e-04
Identities = 20/52 (38%), Positives = 32/52 (61%)
Frame = +3
Query: 111 DNNVFRLHYKATVIILIAFSLLVTSRQYIGDPIDCIVDEIPLAVMDTYAGYT 266
D+ V +L+Y T I+ AF+++V+++QY+G PI C V P D + YT
Sbjct: 19 DDFVDKLNYHYTSAIIFAFAIIVSAKQYVGYPIQCWV---PAQFTDAWEQYT 67
Score = 38.7 bits (86), Expect = 0.003
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 347 GQDEVKYHKYYQWVCFVLFFQAILFYVPRYLWK 445
G + YYQWV FVL +A+ FY+P +W+
Sbjct: 90 GDRRARQISYYQWVPFVLALEALCFYIPCIMWR 122
>U39677-4|AAN71842.1| 428|Caenorhabditis elegans Innexin protein 1,
isoform a protein.
Length = 428
Score = 40.7 bits (91), Expect = 8e-04
Identities = 20/52 (38%), Positives = 32/52 (61%)
Frame = +3
Query: 111 DNNVFRLHYKATVIILIAFSLLVTSRQYIGDPIDCIVDEIPLAVMDTYAGYT 266
D+ V +L+Y T I+ AF+++V+++QY+G PI C V P D + YT
Sbjct: 19 DDFVDKLNYHYTSAIIFAFAIIVSAKQYVGYPIQCWV---PAQFTDAWEQYT 67
Score = 38.7 bits (86), Expect = 0.003
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 347 GQDEVKYHKYYQWVCFVLFFQAILFYVPRYLWK 445
G + YYQWV FVL +A+ FY+P +W+
Sbjct: 90 GDRRARQISYYQWVPFVLALEALCFYIPCIMWR 122
>U97404-1|AAB93310.1| 408|Caenorhabditis elegans Innexin protein 12
protein.
Length = 408
Score = 40.3 bits (90), Expect = 0.001
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +2
Query: 374 YYQWVCFVLFFQAILFYVPRYLWKTWEG 457
YYQWV F+L QA+LFY P +W+ + G
Sbjct: 111 YYQWVPFILALQAMLFYFPVVIWRLFYG 138
Score = 32.7 bits (71), Expect = 0.20
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 120 VFRLHYKATVIILIAFSLLVTSRQYIGDPIDC 215
V +L+Y AT I L+ S +T ++G PIDC
Sbjct: 20 VDKLNYCATTIGLVLASAFITGWSFVGSPIDC 51
>U64859-3|AAC69093.2| 447|Caenorhabditis elegans Innexin protein 5
protein.
Length = 447
Score = 40.3 bits (90), Expect = 0.001
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +2
Query: 374 YYQWVCFVLFFQAILFYVPRYLWKTW 451
YYQW+ VL QA LFY+P +W+T+
Sbjct: 106 YYQWIPIVLVLQAFLFYLPSIIWRTF 131
>AF068716-8|AAC17749.1| 554|Caenorhabditis elegans Innexin protein
4 protein.
Length = 554
Score = 38.7 bits (86), Expect = 0.003
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 356 EVKYHKYYQWVCFVLFFQAILFYVPRYLWK 445
E + YYQWV F L QA L+Y+P +W+
Sbjct: 130 EYRQISYYQWVPFFLLLQAFLYYIPCLMWR 159
>Z83240-3|CAB05813.2| 483|Caenorhabditis elegans Hypothetical
protein T23H4.1 protein.
Length = 483
Score = 38.3 bits (85), Expect = 0.004
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +3
Query: 33 PTRRAPAMFDVFGSVKGLLKLDSVCIDNNVF-RLHYKATVIILIAFSLLVTSRQYIGDPI 209
P R P M VF + G L D+++F RLHY T L+ ++L++ + + G PI
Sbjct: 20 PGARVPRM--VFAEIVGTLSFLQPQADDDIFDRLHYYYTTTFLLLTAVLISLKMFGGRPI 77
Query: 210 DC 215
+C
Sbjct: 78 EC 79
Score = 33.5 bits (73), Expect = 0.11
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 374 YYQWVCFVLFFQAILFYVPRYLWK 445
YYQWV F L + A FY P +W+
Sbjct: 125 YYQWVPFFLVYVAFSFYAPCLIWR 148
>Z75552-3|CAA99940.1| 465|Caenorhabditis elegans Hypothetical
protein W04D2.3 protein.
Length = 465
Score = 38.3 bits (85), Expect = 0.004
Identities = 15/24 (62%), Positives = 15/24 (62%)
Frame = +2
Query: 374 YYQWVCFVLFFQAILFYVPRYLWK 445
YYQWV F L QA F P YLWK
Sbjct: 103 YYQWVPFFLLLQAAFFRAPSYLWK 126
Score = 35.5 bits (78), Expect = 0.028
Identities = 15/31 (48%), Positives = 24/31 (77%)
Frame = +3
Query: 126 RLHYKATVIILIAFSLLVTSRQYIGDPIDCI 218
RL+Y T IL+AFS+L++ +Q+ G PI+C+
Sbjct: 25 RLNYLMTPNILLAFSVLISFKQFGGRPIECM 55
>Z71259-7|CAA95793.1| 423|Caenorhabditis elegans Hypothetical
protein F13G3.8 protein.
Length = 423
Score = 38.3 bits (85), Expect = 0.004
Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Frame = +3
Query: 60 DVFGSVKGLLK--LDSVCIDNNVFRLHYKATVIILIAFSLLVTSRQYIGDPIDCIV 221
++ GS+ ++K LD + D RL+Y + +I++ SL +T+RQY+G P+ C V
Sbjct: 2 NMLGSMFSMVKPRLDDLGTD----RLNYYYSTLIIMGMSLTITARQYVGSPLQCWV 53
Score = 31.9 bits (69), Expect = 0.35
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2
Query: 374 YYQWVCFVLFFQAILFYVPRYLW 442
YYQW F++ +A FY+P W
Sbjct: 97 YYQWAPFIMAIEAAFFYLPVIFW 119
>U59210-1|AAB09669.1| 423|Caenorhabditis elegans EAT-5 protein.
Length = 423
Score = 38.3 bits (85), Expect = 0.004
Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Frame = +3
Query: 60 DVFGSVKGLLK--LDSVCIDNNVFRLHYKATVIILIAFSLLVTSRQYIGDPIDCIV 221
++ GS+ ++K LD + D RL+Y + +I++ SL +T+RQY+G P+ C V
Sbjct: 2 NMLGSMFSMVKPRLDDLGTD----RLNYYYSTLIIMGMSLTITARQYVGSPLQCWV 53
Score = 31.9 bits (69), Expect = 0.35
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2
Query: 374 YYQWVCFVLFFQAILFYVPRYLW 442
YYQW F++ +A FY+P W
Sbjct: 97 YYQWAPFIMAIEAAFFYLPVIFW 119
>U59211-1|AAB09670.1| 420|Caenorhabditis elegans embryonic membrane
protein protein.
Length = 420
Score = 37.9 bits (84), Expect = 0.005
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +2
Query: 374 YYQWVCFVLFFQAILFYVPRYLWKT 448
YYQWV VL QA +FY+P ++W +
Sbjct: 101 YYQWVPIVLAIQAFMFYLPSWIWSS 125
Score = 35.9 bits (79), Expect = 0.022
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +3
Query: 111 DNNVFRLHYKATVIILIAFSLLVTSRQYIGDPIDC 215
D+ V RL Y T +L FS++V+ +QY+G I C
Sbjct: 21 DDAVDRLSYVTTATLLAFFSIMVSCKQYVGSAIQC 55
>U53343-3|AAA96220.2| 420|Caenorhabditis elegans Innexin protein 3
protein.
Length = 420
Score = 37.9 bits (84), Expect = 0.005
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +2
Query: 374 YYQWVCFVLFFQAILFYVPRYLWKT 448
YYQWV VL QA +FY+P ++W +
Sbjct: 101 YYQWVPIVLAIQAFMFYLPSWIWSS 125
Score = 35.9 bits (79), Expect = 0.022
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +3
Query: 111 DNNVFRLHYKATVIILIAFSLLVTSRQYIGDPIDC 215
D+ V RL Y T +L FS++V+ +QY+G I C
Sbjct: 21 DDAVDRLSYVTTATLLAFFSIMVSCKQYVGSAIQC 55
>Z66561-7|CAB54206.2| 419|Caenorhabditis elegans Hypothetical
protein F08G12.10 protein.
Length = 419
Score = 36.3 bits (80), Expect = 0.016
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +2
Query: 362 KYHKYYQWVCFVLFFQAILFYVPRYLW 442
++ YY+WV VL FQA +F +P +LW
Sbjct: 99 RHINYYRWVPLVLLFQAAMFVLPYHLW 125
Score = 29.9 bits (64), Expect = 1.4
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +3
Query: 114 NNVFRLHYKATVIILIAFSLLVTSRQYIGDPIDC 215
+ + R++ T +L+A +L ++ +QY G PI C
Sbjct: 26 DTIDRVNAWFTPFVLVAMTLAISCKQYFGQPIKC 59
>AF304127-1|AAG50240.1| 419|Caenorhabditis elegans innexin protein.
Length = 419
Score = 36.3 bits (80), Expect = 0.016
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +2
Query: 362 KYHKYYQWVCFVLFFQAILFYVPRYLW 442
++ YY+WV VL FQA +F +P +LW
Sbjct: 99 RHINYYRWVPLVLLFQAAMFVLPYHLW 125
Score = 29.9 bits (64), Expect = 1.4
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +3
Query: 114 NNVFRLHYKATVIILIAFSLLVTSRQYIGDPIDC 215
+ + R++ T +L+A +L ++ +QY G PI C
Sbjct: 26 DTIDRVNAWFTPFVLVAMTLAISCKQYFGQPIKC 59
>AF063009-2|AAO21399.1| 438|Caenorhabditis elegans Innexin protein
19, isoform b protein.
Length = 438
Score = 36.3 bits (80), Expect = 0.016
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = +3
Query: 111 DNNVFRLHYKATVIILIAFSLLVTSRQYIGDPIDCIVDEIPLAVMDTY 254
D+ V RL+Y T +IL L+++++QY G PI+C V+ M+ Y
Sbjct: 21 DDAVDRLNYYYTPLILAVCCLVISAKQYGGTPIECWVNPHSRESMEEY 68
Score = 34.3 bits (75), Expect = 0.066
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 356 EVKYHKYYQWVCFVLFFQAILFYVPRYLWK 445
E K YYQWV F+L +A++F +P W+
Sbjct: 95 EEKQIGYYQWVPFILIAEALMFSLPCIFWR 124
>AF063009-1|AAM45360.1| 454|Caenorhabditis elegans Innexin protein
19, isoform a protein.
Length = 454
Score = 36.3 bits (80), Expect = 0.016
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = +3
Query: 111 DNNVFRLHYKATVIILIAFSLLVTSRQYIGDPIDCIVDEIPLAVMDTY 254
D+ V RL+Y T +IL L+++++QY G PI+C V+ M+ Y
Sbjct: 37 DDAVDRLNYYYTPLILAVCCLVISAKQYGGTPIECWVNPHSRESMEEY 84
Score = 34.3 bits (75), Expect = 0.066
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 356 EVKYHKYYQWVCFVLFFQAILFYVPRYLWK 445
E K YYQWV F+L +A++F +P W+
Sbjct: 111 EEKQIGYYQWVPFILIAEALMFSLPCIFWR 140
>U41746-5|AAT81186.1| 492|Caenorhabditis elegans Innexin protein
10, isoform b protein.
Length = 492
Score = 35.9 bits (79), Expect = 0.022
Identities = 17/46 (36%), Positives = 29/46 (63%)
Frame = +3
Query: 120 VFRLHYKATVIILIAFSLLVTSRQYIGDPIDCIVDEIPLAVMDTYA 257
V RLH T +LI ++LV+ +Q+ G P++C+V +I + + YA
Sbjct: 22 VDRLHSYFTCNLLIGLAVLVSFKQFGGKPVECLVPDIFSSSWEQYA 67
Score = 35.1 bits (77), Expect = 0.038
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +2
Query: 353 DEVKYHK--YYQWVCFVLFFQAILFYVPRYLWKTWEG 457
DE + K YYQWV F L +A F +P LWK G
Sbjct: 91 DEKRQRKISYYQWVPFFLLLEAACFRLPSLLWKYLAG 127
>U41746-4|AAA83332.1| 559|Caenorhabditis elegans Innexin protein
10, isoform a protein.
Length = 559
Score = 35.9 bits (79), Expect = 0.022
Identities = 17/46 (36%), Positives = 29/46 (63%)
Frame = +3
Query: 120 VFRLHYKATVIILIAFSLLVTSRQYIGDPIDCIVDEIPLAVMDTYA 257
V RLH T +LI ++LV+ +Q+ G P++C+V +I + + YA
Sbjct: 22 VDRLHSYFTCNLLIGLAVLVSFKQFGGKPVECLVPDIFSSSWEQYA 67
Score = 35.1 bits (77), Expect = 0.038
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +2
Query: 353 DEVKYHK--YYQWVCFVLFFQAILFYVPRYLWKTWEG 457
DE + K YYQWV F L +A F +P LWK G
Sbjct: 91 DEKRQRKISYYQWVPFFLLLEAACFRLPSLLWKYLAG 127
>U41558-3|AAK39244.1| 556|Caenorhabditis elegans Innexin protein 7
protein.
Length = 556
Score = 35.9 bits (79), Expect = 0.022
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +2
Query: 374 YYQWVCFVLFFQAILFYVPRYLWK 445
YYQW+ F L F+A F +P ++WK
Sbjct: 121 YYQWMSFFLLFEAACFRLPCFIWK 144
Score = 27.9 bits (59), Expect = 5.7
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +3
Query: 120 VFRLHYKATVIILIAFSLLVTSRQYIGDPIDCIV 221
V +H T +L+ ++L++ +Q+ G PI+C+V
Sbjct: 22 VASIHSFLTSNLLVGLAVLISWKQFGGTPIECMV 55
>AC024791-35|AAF60675.2| 462|Caenorhabditis elegans Innexin protein
22 protein.
Length = 462
Score = 35.1 bits (77), Expect = 0.038
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 111 DNNVFRLHYKATVIILIAFSLLVTSRQYIGDPIDCIV 221
DN R+ + T+ ILI F LV+S G PI C++
Sbjct: 20 DNGAERIVHTTTIQILICFGFLVSSNMMFGQPITCLM 56
Score = 33.9 bits (74), Expect = 0.087
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 374 YYQWVCFVLFFQAILFYVPRYLWK 445
YYQW F++F Q + VP +WK
Sbjct: 110 YYQWTPFIIFLQVAMCLVPALMWK 133
>Z72506-2|CAA96621.1| 434|Caenorhabditis elegans Hypothetical
protein F07A5.1b protein.
Length = 434
Score = 30.7 bits (66), Expect = 0.81
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +3
Query: 126 RLHYKATVIILIAFSLLVTSRQYIGDPIDCIV 221
RLH TV +L F LL ++Q+ G+PIDC++
Sbjct: 27 RLHL-FTVYLLGFFVLLTGAKQHFGNPIDCML 57
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +2
Query: 374 YYQWVCFVLFFQAILFYVPRYLW 442
YYQWV F FQ F +P + W
Sbjct: 103 YYQWVPFFFAFQVCCFLLPFWCW 125
>Z72506-1|CAA96618.1| 432|Caenorhabditis elegans Hypothetical
protein F07A5.1a protein.
Length = 432
Score = 30.7 bits (66), Expect = 0.81
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +3
Query: 126 RLHYKATVIILIAFSLLVTSRQYIGDPIDCIV 221
RLH TV +L F LL ++Q+ G+PIDC++
Sbjct: 27 RLHL-FTVYLLGFFVLLTGAKQHFGNPIDCML 57
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +2
Query: 374 YYQWVCFVLFFQAILFYVPRYLW 442
YYQWV F FQ F +P + W
Sbjct: 103 YYQWVPFFFAFQVCCFLLPFWCW 125
>Z68302-5|CAA92633.2| 382|Caenorhabditis elegans Hypothetical
protein ZK792.2 protein.
Length = 382
Score = 30.7 bits (66), Expect = 0.81
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 374 YYQWVCFVLFFQAILFYVPRYLWK 445
YYQW L I F +P++LW+
Sbjct: 101 YYQWSSMYLAVAGIAFMIPKFLWR 124
>U58734-5|AAB52504.3| 870|Caenorhabditis elegans Hypothetical
protein T27A10.6 protein.
Length = 870
Score = 30.7 bits (66), Expect = 0.81
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +1
Query: 436 LVENVGRRPHQDVVLDLNCPIVED 507
+VE+VG++ QDVV DL+C VED
Sbjct: 44 MVESVGQK-RQDVVFDLSCETVED 66
>Z68302-1|CAA92634.2| 382|Caenorhabditis elegans Hypothetical
protein ZK792.3 protein.
Length = 382
Score = 29.9 bits (64), Expect = 1.4
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2
Query: 374 YYQWVCFVLFFQAILFYVPRYLWK 445
YYQW L I F +P+++W+
Sbjct: 101 YYQWSSMYLAVAGIAFMIPKFIWR 124
>Z81536-4|CAB04364.1| 310|Caenorhabditis elegans Hypothetical
protein F40D4.5 protein.
Length = 310
Score = 27.9 bits (59), Expect = 5.7
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Frame = +2
Query: 395 VLFFQAILFYVPRY--LWKTWE--GGRIKMWSWILTVPSLKTVQV 517
++FF + F P Y LWK+ E I MWS++ V +LK+ +V
Sbjct: 246 MVFFALVCFAQPFYVMLWKSSEYRDAFIDMWSFLECVKNLKSSKV 290
>Z81142-3|CAB03505.1| 491|Caenorhabditis elegans Hypothetical
protein ZK1037.6 protein.
Length = 491
Score = 27.9 bits (59), Expect = 5.7
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = -3
Query: 253 YVSITASGISSTMQSIGSPMYCRDVTRSENAIKIITVAL*CKRNTLLSM 107
++S A G+S+T QSI + + + T+S N K+ V+ N+ L M
Sbjct: 368 FISANAYGVSTTQQSINTYINAPNNTQSAN-FKVTVVSADLVENSTLKM 415
>U67951-2|AAB07570.2| 302|Caenorhabditis elegans Regulator of
fusion protein 2,isoform a protein.
Length = 302
Score = 27.5 bits (58), Expect = 7.5
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -2
Query: 263 ISSVRVHNGERDFINDAVNRV 201
++ +RVH GER F+ D N+V
Sbjct: 127 VNHMRVHTGERPFLCDVCNKV 147
>U67951-1|AAQ65207.1| 315|Caenorhabditis elegans Regulator of
fusion protein 2,isoform b protein.
Length = 315
Score = 27.5 bits (58), Expect = 7.5
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -2
Query: 263 ISSVRVHNGERDFINDAVNRV 201
++ +RVH GER F+ D N+V
Sbjct: 140 VNHMRVHTGERPFLCDVCNKV 160
>U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya binding
family protein 2 protein.
Length = 422
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +2
Query: 260 IYSTFTIPNRLIGRVXKDYVQPGVGPHV 343
I S F P+R +GR K Y VGP V
Sbjct: 58 IVSNFREPDRRLGRYSKYYYHHNVGPEV 85
>AY115477-1|AAM55473.1| 303|Caenorhabditis elegans zinc finger
protein REF-2 protein.
Length = 303
Score = 27.5 bits (58), Expect = 7.5
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -2
Query: 263 ISSVRVHNGERDFINDAVNRV 201
++ +RVH GER F+ D N+V
Sbjct: 128 VNHMRVHTGERPFLCDVCNKV 148
>AF519108-1|AAM74222.1| 909|Caenorhabditis elegans EOR-1 protein.
Length = 909
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -2
Query: 461 GLLP-TFSTSSGEHKTGLLERITQNKPTDNICDI 363
GL P TF SSG+ L +R+ + T CD+
Sbjct: 11 GLCPMTFDDSSGQTSHMLFQRLQYQRKTGRFCDV 44
>AF502568-1|AAM74151.1| 909|Caenorhabditis elegans EOR-1 protein.
Length = 909
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -2
Query: 461 GLLP-TFSTSSGEHKTGLLERITQNKPTDNICDI 363
GL P TF SSG+ L +R+ + T CD+
Sbjct: 11 GLCPMTFDDSSGQTSHMLFQRLQYQRKTGRFCDV 44
>AF100669-8|AAK39268.1| 909|Caenorhabditis elegans Egl-1
suppressor/dio uptake defective/raf enhancer protein 1
protein.
Length = 909
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = -2
Query: 461 GLLP-TFSTSSGEHKTGLLERITQNKPTDNICDI 363
GL P TF SSG+ L +R+ + T CD+
Sbjct: 11 GLCPMTFDDSSGQTSHMLFQRLQYQRKTGRFCDV 44
>U58749-5|AAU05597.1| 1551|Caenorhabditis elegans Hypothetical
protein B0496.3a protein.
Length = 1551
Score = 27.1 bits (57), Expect = 10.0
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -1
Query: 567 ECASSCGNSRQVAFYDPTCTVFNDGT 490
+C C N+ V ++PTC+ + GT
Sbjct: 31 QCIDDCNNNHCVVTHEPTCSKYIYGT 56
>U58749-4|AAU05598.1| 1592|Caenorhabditis elegans Hypothetical
protein B0496.3b protein.
Length = 1592
Score = 27.1 bits (57), Expect = 10.0
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -1
Query: 567 ECASSCGNSRQVAFYDPTCTVFNDGT 490
+C C N+ V ++PTC+ + GT
Sbjct: 31 QCIDDCNNNHCVVTHEPTCSKYIYGT 56
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,368,244
Number of Sequences: 27780
Number of extensions: 307479
Number of successful extensions: 1116
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 1030
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1116
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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