Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20595
         (668 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    23   1.7  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   6.9  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   6.9  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   6.9  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   9.1  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   9.1  

>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 11/44 (25%), Positives = 22/44 (50%)
 Frame = +3

Query: 231 QVWRCSHCNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVI 362
           ++W+ S  +L P         +  P + R  +  ++QT+AV V+
Sbjct: 229 EIWQSSESSLRPRSSQKSAPGKRTPLISRAKINTVKQTIAVIVM 272


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +2

Query: 458 TIFHTTAILH 487
           T++HTTA LH
Sbjct: 155 TLYHTTAYLH 164


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +2

Query: 458 TIFHTTAILH 487
           T++HTTA LH
Sbjct: 155 TLYHTTAYLH 164


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +2

Query: 458 TIFHTTAILH 487
           T++HTTA LH
Sbjct: 155 TLYHTTAYLH 164


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 9/39 (23%), Positives = 17/39 (43%)
 Frame = +1

Query: 469 YNCDTSFTERCFEEKRATNSFLFYIFYKACNVTLFYNLY 585
           Y C T      F+ K      L+Y+++    ++ F  L+
Sbjct: 198 YVCQTVSNFEYFQRKILLMIQLYYLYFDVIVISTFLQLF 236


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 9/39 (23%), Positives = 17/39 (43%)
 Frame = +1

Query: 469 YNCDTSFTERCFEEKRATNSFLFYIFYKACNVTLFYNLY 585
           Y C T      F+ K      L+Y+++    ++ F  L+
Sbjct: 124 YVCQTVSNFEYFQRKILLMIQLYYLYFDVIVISTFLQLF 162


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,589
Number of Sequences: 336
Number of extensions: 3395
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)