Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20595
(668 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 146 2e-37
EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-a... 146 2e-37
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 144 5e-37
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 31 0.010
X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein. 24 1.1
EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2 prot... 24 1.1
AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2 prot... 24 1.1
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 23 2.6
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 23 3.5
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 22 4.6
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 22 6.1
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 146 bits (354), Expect = 2e-37
Identities = 67/73 (91%), Positives = 69/73 (94%)
Frame = +1
Query: 37 KTTPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEV 216
K PP+GAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEK DRRTGK+TE
Sbjct: 330 KNQPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKCDRRTGKTTEE 389
Query: 217 NPKSIKSGDAAIV 255
NPKSIKSGDAAIV
Sbjct: 390 NPKSIKSGDAAIV 402
Score = 89.4 bits (212), Expect = 3e-20
Identities = 56/126 (44%), Positives = 69/126 (54%), Gaps = 1/126 (0%)
Frame = +3
Query: 3 ELRRGYVAGDSKNNPT*GCCRFYSSSHCA*PSWSNLKRLHTSIGLPHCPH-CLQICRNQR 179
ELRRGYVAGDSKN P G F ++ + +T + H H + +
Sbjct: 319 ELRRGYVAGDSKNQPPRGAADF-TAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKE 377
Query: 180 KS*PSYW*IY*SQPKIHQVWRCSHCNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGV 359
K PK + + L P+KP+CVE+FQEFPPLGRFAVRDMRQTVAVGV
Sbjct: 378 KCDRRTGKTTEENPKSIKSGDAAIVMLQPTKPMCVEAFQEFPPLGRFAVRDMRQTVAVGV 437
Query: 360 IKAVNF 377
IK+V F
Sbjct: 438 IKSVTF 443
>EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor
1-alpha protein.
Length = 119
Score = 146 bits (354), Expect = 2e-37
Identities = 67/73 (91%), Positives = 69/73 (94%)
Frame = +1
Query: 37 KTTPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEV 216
K PP+GAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEK DRRTGK+TE
Sbjct: 41 KNQPPRGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKCDRRTGKTTEE 100
Query: 217 NPKSIKSGDAAIV 255
NPKSIKSGDAAIV
Sbjct: 101 NPKSIKSGDAAIV 113
Score = 35.9 bits (79), Expect = 3e-04
Identities = 16/22 (72%), Positives = 16/22 (72%)
Frame = +3
Query: 3 ELRRGYVAGDSKNNPT*GCCRF 68
ELRRGYVAGDSKN P G F
Sbjct: 30 ELRRGYVAGDSKNQPPRGAADF 51
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 144 bits (350), Expect = 5e-37
Identities = 66/73 (90%), Positives = 68/73 (93%)
Frame = +1
Query: 37 KTTPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEV 216
K PPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFA+IKEK DRR GK+TE
Sbjct: 330 KNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFADIKEKCDRRNGKTTEE 389
Query: 217 NPKSIKSGDAAIV 255
NPKSIKSGDAAIV
Sbjct: 390 NPKSIKSGDAAIV 402
Score = 94.3 bits (224), Expect = 9e-22
Identities = 59/126 (46%), Positives = 70/126 (55%), Gaps = 1/126 (0%)
Frame = +3
Query: 3 ELRRGYVAGDSKNNPT*GCCRFYSSSHCA*PSWSNLKRLHTSIGLPHCPH-CLQICRNQR 179
ELRRGYVAGDSKNNP G F ++ + +T + H H + +
Sbjct: 319 ELRRGYVAGDSKNNPPKGAADF-TAQVIVLNHPGQISNGYTPVLDCHTAHIACKFADIKE 377
Query: 180 KS*PSYW*IY*SQPKIHQVWRCSHCNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGV 359
K PK + + LVPSKP+C E+FQEFPPLGRFAVRDMRQTVAVGV
Sbjct: 378 KCDRRNGKTTEENPKSIKSGDAAIVMLVPSKPMCAEAFQEFPPLGRFAVRDMRQTVAVGV 437
Query: 360 IKAVNF 377
IKAV F
Sbjct: 438 IKAVTF 443
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 31.1 bits (67), Expect = 0.010
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +3
Query: 3 ELRRGYVAGDSKN 41
ELRRGYVAGDSKN
Sbjct: 262 ELRRGYVAGDSKN 274
>X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein.
Length = 162
Score = 24.2 bits (50), Expect = 1.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 484 KYRSCMKNCAVNSSSYFLPLVAFS 413
K+ C+KN A SSYF+ + F+
Sbjct: 94 KFYDCLKNSADTISSYFVGKMYFN 117
>EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 24.2 bits (50), Expect = 1.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 484 KYRSCMKNCAVNSSSYFLPLVAFS 413
K+ C+KN A SSYF+ + F+
Sbjct: 99 KFYDCLKNSADTISSYFVGKMYFN 122
>AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 24.2 bits (50), Expect = 1.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 484 KYRSCMKNCAVNSSSYFLPLVAFS 413
K+ C+KN A SSYF+ + F+
Sbjct: 99 KFYDCLKNSADTISSYFVGKMYFN 122
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 23.0 bits (47), Expect = 2.6
Identities = 7/23 (30%), Positives = 11/23 (47%)
Frame = -3
Query: 72 CKICSTLRWGCFWSHQQHNHDAI 4
C + L W FW H++ D +
Sbjct: 255 CVLIVVLSWVSFWIHREATSDRV 277
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 22.6 bits (46), Expect = 3.5
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2
Query: 449 VNSTIFHTTAILHSPKGVSKKKG 517
+N T T+ I+ PK S+KKG
Sbjct: 166 MNRTSLKTSKIVSYPKSRSRKKG 188
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 22.2 bits (45), Expect = 4.6
Identities = 7/24 (29%), Positives = 16/24 (66%)
Frame = -3
Query: 318 NDRGVGIPGRTLHIEAWKVPSYNG 247
+DR + + G+ ++++ WK+ Y G
Sbjct: 300 DDRTLRLKGQMIYMDNWKMMMYLG 323
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 21.8 bits (44), Expect = 6.1
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +3
Query: 114 RLHTSIGLPHCPHC 155
RLHT HC HC
Sbjct: 30 RLHTGEKPYHCSHC 43
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,733
Number of Sequences: 438
Number of extensions: 3808
Number of successful extensions: 21
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20221290
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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