Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20594
(700 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_48704| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.073
SB_50702| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29
SB_15719| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.90
SB_34623| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_39069| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_58481| Best HMM Match : MAM33 (HMM E-Value=4.7) 29 3.6
SB_23387| Best HMM Match : REX1 (HMM E-Value=0.11) 29 4.8
SB_25525| Best HMM Match : ABC1 (HMM E-Value=1.19993e-41) 28 6.3
SB_49865| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_48337| Best HMM Match : zf-CCHC (HMM E-Value=9.3) 28 8.4
SB_35030| Best HMM Match : Peptidase_A16_N (HMM E-Value=4.3e-05) 28 8.4
SB_34577| Best HMM Match : zf-CCHC (HMM E-Value=9.3) 28 8.4
SB_30597| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_26543| Best HMM Match : Peptidase_A16_N (HMM E-Value=0.0084) 28 8.4
SB_22928| Best HMM Match : Peptidase_A16_N (HMM E-Value=0.00027) 28 8.4
SB_17795| Best HMM Match : Peptidase_A16_N (HMM E-Value=2e-05) 28 8.4
SB_6348| Best HMM Match : Peptidase_A16_N (HMM E-Value=2.8e-05) 28 8.4
SB_55711| Best HMM Match : Peptidase_A16_N (HMM E-Value=3.2e-05) 28 8.4
SB_54714| Best HMM Match : Peptidase_A16_N (HMM E-Value=2.8e-05) 28 8.4
SB_52621| Best HMM Match : Peptidase_A16_N (HMM E-Value=2.4e-05) 28 8.4
SB_42797| Best HMM Match : Peptidase_A16_N (HMM E-Value=2e-05) 28 8.4
SB_16545| Best HMM Match : Cullin (HMM E-Value=0) 28 8.4
SB_7511| Best HMM Match : Peptidase_A16_N (HMM E-Value=4.4e-05) 28 8.4
>SB_48704| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1044
Score = 34.7 bits (76), Expect = 0.073
Identities = 19/68 (27%), Positives = 34/68 (50%)
Frame = -2
Query: 591 LHCCSVHLIWLFLIHLNCHFHENPSVAVFPFMVFHVSALTLFAILLKAFVHYFRPFTNHL 412
L CC+V + +F+IH H+++ ++A M++H T+ + L + V F L
Sbjct: 358 LQCCNVAM--MFVIHCRRHYYK-ATLAQLSDMLYHKHQGTILSALTEKKVETFHSLLRRL 414
Query: 411 FKRFSEKF 388
FS+ F
Sbjct: 415 HNNFSDNF 422
>SB_50702| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 823
Score = 32.7 bits (71), Expect = 0.29
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = +2
Query: 29 IHMNSTKNSSYDSYNDRLGEILNRSITSKMRDSSIDETLAGFGKLRISALTKAVELSPLV 208
IH+N N Y YN + I S ++ I +++ GF R++A+T+ +L P V
Sbjct: 228 IHLNRPWNPKYHDYNSKTENRFESHIRSLVK--LIFDSVPGFVNDRVAAITEGPDLHPYV 285
Query: 209 K 211
+
Sbjct: 286 R 286
>SB_15719| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 31.1 bits (67), Expect = 0.90
Identities = 24/92 (26%), Positives = 44/92 (47%)
Frame = -2
Query: 483 SALTLFAILLKAFVHYFRPFTNHLFKRFSEKFH**LMQLCFTFFHYEIITEIPSELIFNK 304
S +TL AI L+ FV P + K +++ + L FT+ + I++ +P + +
Sbjct: 142 SIMTLAAIALERFVAVEEPLL-YTTKVTAQRA---TVVLAFTWIYSIIVSFVPFFSLLSN 197
Query: 303 VLWQRFNFGGDLFFFIINSFFAGLLGPMVASF 208
Q FGG+ FI + F +G M+ ++
Sbjct: 198 PRMQCLFFGGEFVIFITVTSFVAPVGVMIFAY 229
>SB_34623| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 553
Score = 29.5 bits (63), Expect = 2.7
Identities = 22/95 (23%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
Frame = +1
Query: 238 CKERINYEEKQIPAKIEPLPEDLVE-----DKLRGDLGYNLIMKECEAQLHQLSVEFFRK 402
C ++ E+ + ++ + +DL + +K GY + QL +L VEF K
Sbjct: 108 CLAKLKTEKNSLEQRLSCIEQDLKQRLATCEKELMISGYKQAFNDKSEQLSRLQVEFDAK 167
Query: 403 SFEQMICKRAEIMNKCFQKYSEQRERRDMKYHKRK 507
S E + K A+ M ++ Q+ + +Y K +
Sbjct: 168 STE-LANKHAQEMTAEKERILHQKSKTQQQYEKER 201
>SB_39069| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 232
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/62 (27%), Positives = 30/62 (48%)
Frame = +2
Query: 113 KMRDSSIDETLAGFGKLRISALTKAVELSPLVKEATIGPNSPAKKELIMKKNKSPPKLNR 292
K + I + G GK +I T A + + +++ GP + A++ L+ K+NK N
Sbjct: 41 KFKSLDIQDENKGEGKGKIRTFTNAQNATQV--QSSSGPQNQAERGLLSKENKGDADTNS 98
Query: 293 CQ 298
Q
Sbjct: 99 IQ 100
>SB_58481| Best HMM Match : MAM33 (HMM E-Value=4.7)
Length = 233
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/62 (27%), Positives = 30/62 (48%)
Frame = +2
Query: 113 KMRDSSIDETLAGFGKLRISALTKAVELSPLVKEATIGPNSPAKKELIMKKNKSPPKLNR 292
K + I + G GK +I T A + + +++ GP + A++ L+ K+NK N
Sbjct: 42 KFKSLDIQDENKGEGKGKIRTFTNAQNATQV--QSSSGPQNQAERGLLSKENKGDADTNS 99
Query: 293 CQ 298
Q
Sbjct: 100 IQ 101
>SB_23387| Best HMM Match : REX1 (HMM E-Value=0.11)
Length = 1011
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +1
Query: 247 RINYEEKQIPAKIEPLPEDLVEDKLRGDLGYNLIMK-ECEAQLHQL 381
+I Y+E+ K + + E V ++LR +LGY+ + E E QL QL
Sbjct: 966 KIEYQEELEKLKGQLMEEREVAERLREELGYDKNSRYEAEGQLSQL 1011
>SB_25525| Best HMM Match : ABC1 (HMM E-Value=1.19993e-41)
Length = 1008
Score = 28.3 bits (60), Expect = 6.3
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -2
Query: 549 HLNCHFHENPSVAVFPFMVFHVSALTLFA 463
HL+CH H+ P V + +HV +L +
Sbjct: 871 HLSCHVHQAPPVTCTKHLSYHVHQASLLS 899
>SB_49865| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 627
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 244 ERINYEEKQIPAKIEPLPEDLVEDKLRGDLGYNLIMKECEAQL 372
E YE +PA +E +PE + RG N +M+E A+L
Sbjct: 35 EAAQYESILVPALLEKIPEAVRLSITRGKSHENWVMEEMLAEL 77
>SB_48337| Best HMM Match : zf-CCHC (HMM E-Value=9.3)
Length = 146
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 244 ERINYEEKQIPAKIEPLPEDLVEDKLRGDLGYNLIMKECEAQL 372
E YE +PA +E +PE + RG N +M+E A+L
Sbjct: 35 EAAQYESILVPALLEKIPEAVRLSITRGKSHENWVMEEMLAEL 77
>SB_35030| Best HMM Match : Peptidase_A16_N (HMM E-Value=4.3e-05)
Length = 353
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 244 ERINYEEKQIPAKIEPLPEDLVEDKLRGDLGYNLIMKECEAQL 372
E YE +PA +E +PE + RG N +M+E A+L
Sbjct: 242 EAAQYESILVPALLEKIPEAVRLSITRGKSHENWVMEEMLAEL 284
>SB_34577| Best HMM Match : zf-CCHC (HMM E-Value=9.3)
Length = 146
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 244 ERINYEEKQIPAKIEPLPEDLVEDKLRGDLGYNLIMKECEAQL 372
E YE +PA +E +PE + RG N +M+E A+L
Sbjct: 35 EAAQYESILVPALLEKIPEAVRLSITRGKSHENWVMEEMLAEL 77
>SB_30597| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 698
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 244 ERINYEEKQIPAKIEPLPEDLVEDKLRGDLGYNLIMKECEAQL 372
E YE +PA +E +PE + RG N +M+E A+L
Sbjct: 653 EAAQYESILVPALLEKIPEAVRLSITRGKSHENWVMEEMLAEL 695
>SB_26543| Best HMM Match : Peptidase_A16_N (HMM E-Value=0.0084)
Length = 202
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 244 ERINYEEKQIPAKIEPLPEDLVEDKLRGDLGYNLIMKECEAQL 372
E YE +PA +E +PE + RG N +M+E A+L
Sbjct: 91 EAAQYESILVPALLEKIPEAVRLSITRGKSHENWVMEEMLAEL 133
>SB_22928| Best HMM Match : Peptidase_A16_N (HMM E-Value=0.00027)
Length = 206
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 244 ERINYEEKQIPAKIEPLPEDLVEDKLRGDLGYNLIMKECEAQL 372
E YE +PA +E +PE + RG N +M+E A+L
Sbjct: 107 EAAQYESILVPALLEKIPEAVRLSITRGKSHENWVMEEMLAEL 149
>SB_17795| Best HMM Match : Peptidase_A16_N (HMM E-Value=2e-05)
Length = 272
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 244 ERINYEEKQIPAKIEPLPEDLVEDKLRGDLGYNLIMKECEAQL 372
E YE +PA +E +PE + RG N +M+E A+L
Sbjct: 161 EAAQYESILVPALLEKIPEAVRLSITRGKSHENWVMEEMLAEL 203
>SB_6348| Best HMM Match : Peptidase_A16_N (HMM E-Value=2.8e-05)
Length = 287
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 244 ERINYEEKQIPAKIEPLPEDLVEDKLRGDLGYNLIMKECEAQL 372
E YE +PA +E +PE + RG N +M+E A+L
Sbjct: 242 EAAQYESILVPALLEKIPEAVRLSITRGKSHENWVMEEMLAEL 284
>SB_55711| Best HMM Match : Peptidase_A16_N (HMM E-Value=3.2e-05)
Length = 287
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 244 ERINYEEKQIPAKIEPLPEDLVEDKLRGDLGYNLIMKECEAQL 372
E YE +PA +E +PE + RG N +M+E A+L
Sbjct: 242 EAAQYESILVPALLEKIPEAVRLSITRGKSHENWVMEEMLAEL 284
>SB_54714| Best HMM Match : Peptidase_A16_N (HMM E-Value=2.8e-05)
Length = 287
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 244 ERINYEEKQIPAKIEPLPEDLVEDKLRGDLGYNLIMKECEAQL 372
E YE +PA +E +PE + RG N +M+E A+L
Sbjct: 242 EAAQYESILVPALLEKIPEAVRLSITRGKSHENWVMEEMLAEL 284
>SB_52621| Best HMM Match : Peptidase_A16_N (HMM E-Value=2.4e-05)
Length = 332
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 244 ERINYEEKQIPAKIEPLPEDLVEDKLRGDLGYNLIMKECEAQL 372
E YE +PA +E +PE + RG N +M+E A+L
Sbjct: 221 EAAQYESILVPALLEKIPEAVRLSITRGKSHENWVMEEMLAEL 263
>SB_42797| Best HMM Match : Peptidase_A16_N (HMM E-Value=2e-05)
Length = 668
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 244 ERINYEEKQIPAKIEPLPEDLVEDKLRGDLGYNLIMKECEAQL 372
E YE +PA +E +PE + RG N +M+E A+L
Sbjct: 242 EAAQYESILVPALLEKIPEAVRLSITRGKSHENWVMEEMLAEL 284
>SB_16545| Best HMM Match : Cullin (HMM E-Value=0)
Length = 471
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/41 (26%), Positives = 23/41 (56%)
Frame = +1
Query: 298 EDLVEDKLRGDLGYNLIMKECEAQLHQLSVEFFRKSFEQMI 420
EDL K + Y+ +++ECEA++ + + + + QM+
Sbjct: 96 EDLRARKFLHPVSYSRVIRECEARMVEEHIPYLQAECRQMV 136
>SB_7511| Best HMM Match : Peptidase_A16_N (HMM E-Value=4.4e-05)
Length = 266
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 244 ERINYEEKQIPAKIEPLPEDLVEDKLRGDLGYNLIMKECEAQL 372
E YE +PA +E +PE + RG N +M+E A+L
Sbjct: 221 EAAQYESILVPALLEKIPEAVRLSITRGKSHENWVMEEMLAEL 263
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,463,414
Number of Sequences: 59808
Number of extensions: 382982
Number of successful extensions: 1044
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 986
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1043
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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