Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20594
         (700 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113301-1|AAM29306.1|  244|Drosophila melanogaster AT26069p pro...    30   3.5  
AY052145-1|AAK93569.1|  966|Drosophila melanogaster SD10481p pro...    30   3.5  
AE013599-2549|AAF57801.1|  966|Drosophila melanogaster CG4996-PA...    30   3.5  
AE013599-1758|AAF58344.1|  680|Drosophila melanogaster CG13337-P...    30   3.5  

>AY113301-1|AAM29306.1|  244|Drosophila melanogaster AT26069p
           protein.
          Length = 244

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
 Frame = +1

Query: 313 DKLRGDLGYNLIMKECEAQLHQLSVEFFRKSFEQMICKRAEIMNKCF---QKYSEQRERR 483
           ++L  D     +MKEC  +    S E  ++  E+  CK +E + KC     K  E    R
Sbjct: 138 ERLIKDKKIEKLMKECPVKKKGDSAEGCKEPREKERCKESETLRKCIADTTKLLEAELER 197

Query: 484 DMKYHKRK 507
           + K  K K
Sbjct: 198 ESKKEKEK 205


>AY052145-1|AAK93569.1|  966|Drosophila melanogaster SD10481p
           protein.
          Length = 966

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 14/61 (22%), Positives = 34/61 (55%)
 Frame = +3

Query: 510 QLQKDFHENDNLNVLKIAKLDEQNNSAMINRQTIDNMNRILEEQNKATARFAAITDSHTK 689
           +L+K  ++  +  ++++     +    ++ +Q + N   ILE++N  ++ FAAI D+  K
Sbjct: 93  ELKKVLNDGIDNELIEVTIAQLRTQQKVLTKQVLQN---ILEQRNACSSEFAAINDTQKK 149

Query: 690 I 692
           +
Sbjct: 150 L 150


>AE013599-2549|AAF57801.1|  966|Drosophila melanogaster CG4996-PA
           protein.
          Length = 966

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 14/61 (22%), Positives = 34/61 (55%)
 Frame = +3

Query: 510 QLQKDFHENDNLNVLKIAKLDEQNNSAMINRQTIDNMNRILEEQNKATARFAAITDSHTK 689
           +L+K  ++  +  ++++     +    ++ +Q + N   ILE++N  ++ FAAI D+  K
Sbjct: 93  ELKKVLNDGIDNELIEVTIAQLRTQQKVLTKQVLQN---ILEQRNACSSEFAAINDTQKK 149

Query: 690 I 692
           +
Sbjct: 150 L 150


>AE013599-1758|AAF58344.1|  680|Drosophila melanogaster CG13337-PA
           protein.
          Length = 680

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 20/68 (29%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
 Frame = +1

Query: 313 DKLRGDLGYNLIMKECEAQLHQLSVEFFRKSFEQMICKRAEIMNKCF---QKYSEQRERR 483
           ++L  D     +MKEC  +    S E  ++  E+  CK +E + KC     K  E    R
Sbjct: 138 ERLIKDKKIEKLMKECPVKKKGDSAEGCKEPREKERCKESETLRKCIADTTKLLEAELER 197

Query: 484 DMKYHKRK 507
           + K  K K
Sbjct: 198 ESKKEKEK 205


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,223,741
Number of Sequences: 53049
Number of extensions: 553196
Number of successful extensions: 1898
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1897
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)