Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20593
(541 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O17445 Cluster: 60S ribosomal protein L15; n=132; Eukar... 128 6e-29
UniRef50_P61313 Cluster: 60S ribosomal protein L15; n=69; Eukary... 120 3e-26
UniRef50_P91374 Cluster: 60S ribosomal protein L15; n=41; Eumeta... 108 7e-23
UniRef50_P41961 Cluster: 60S ribosomal protein L15; n=3; Eukaryo... 103 3e-21
UniRef50_Q9HSL2 Cluster: 50S ribosomal protein L15e; n=6; Euryar... 75 8e-13
UniRef50_O58706 Cluster: 50S ribosomal protein L15e; n=40; cellu... 74 2e-12
UniRef50_A2YC64 Cluster: Ribosomal protein L15; n=6; Eukaryota|R... 73 6e-12
UniRef50_A3H928 Cluster: Ribosomal protein L15e; n=1; Caldivirga... 72 1e-11
UniRef50_UPI00015BB1DC Cluster: LSU ribosomal protein L15E; n=1;... 71 2e-11
UniRef50_Q4JB20 Cluster: 50S ribosomal protein L15e; n=4; Thermo... 68 2e-10
UniRef50_UPI0000DA2AC3 Cluster: PREDICTED: hypothetical protein;... 67 2e-10
UniRef50_Q8ZWD8 Cluster: 50S ribosomal protein L15e; n=4; Pyroba... 54 2e-06
UniRef50_A7PSH3 Cluster: Chromosome chr6 scaffold_28, whole geno... 52 8e-06
UniRef50_A0RW64 Cluster: Ribosomal protein L15E; n=2; Crenarchae... 51 2e-05
UniRef50_A7DNS0 Cluster: Ribosomal protein L15e; n=1; Candidatus... 48 1e-04
UniRef50_O23581 Cluster: Putative uncharacterized protein dl4725... 40 0.048
UniRef50_UPI0000494D88 Cluster: PREDICTED: hypothetical protein ... 37 0.34
UniRef50_A1K3L4 Cluster: General secretion pathway protein F; n=... 33 4.2
>UniRef50_O17445 Cluster: 60S ribosomal protein L15; n=132;
Eukaryota|Rep: 60S ribosomal protein L15 - Drosophila
melanogaster (Fruit fly)
Length = 204
Score = 128 bits (310), Expect = 6e-29
Identities = 58/85 (68%), Positives = 63/85 (74%)
Frame = +2
Query: 254 IAKGATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVIL 433
+ KG TYGKPKSHGVNQLKP R LQSIAEE +SYW+AQD+SYKYFEVIL
Sbjct: 75 VPKGCTYGKPKSHGVNQLKPYRGLQSIAEERVGRRLGGLRVLNSYWIAQDASYKYFEVIL 134
Query: 434 VDPSHKAIRRDPKINWIVNAVHKHR 508
+D H AIRRDPKINWI VHKHR
Sbjct: 135 IDTHHSAIRRDPKINWICKHVHKHR 159
Score = 123 bits (297), Expect = 2e-27
Identities = 52/62 (83%), Positives = 61/62 (98%)
Frame = +3
Query: 33 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQGYV 212
MGAYRY+QELYRKK SDVMR+LLR+RVWQYRQLT++HR+PRPTRPDKARRLGYRAKQG+V
Sbjct: 1 MGAYRYMQELYRKKQSDVMRYLLRIRVWQYRQLTKLHRSPRPTRPDKARRLGYRAKQGFV 60
Query: 213 VF 218
++
Sbjct: 61 IY 62
>UniRef50_P61313 Cluster: 60S ribosomal protein L15; n=69;
Eukaryota|Rep: 60S ribosomal protein L15 - Homo sapiens
(Human)
Length = 204
Score = 120 bits (288), Expect = 3e-26
Identities = 52/62 (83%), Positives = 59/62 (95%)
Frame = +3
Query: 33 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQGYV 212
MGAY+YIQEL+RKK SDVMRFLLRVR WQYRQL+ +HRAPRPTRPDKARRLGY+AKQGYV
Sbjct: 1 MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYV 60
Query: 213 VF 218
++
Sbjct: 61 IY 62
Score = 114 bits (275), Expect = 1e-24
Identities = 51/85 (60%), Positives = 60/85 (70%)
Frame = +2
Query: 254 IAKGATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVIL 433
+ KGATYGKP HGVNQLK R+LQS+AEE +SYWV +DS+YK+FEVIL
Sbjct: 75 VPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVIL 134
Query: 434 VDPSHKAIRRDPKINWIVNAVHKHR 508
+DP HKAIRR+P WI VHKHR
Sbjct: 135 IDPFHKAIRRNPDTQWITKPVHKHR 159
>UniRef50_P91374 Cluster: 60S ribosomal protein L15; n=41;
Eumetazoa|Rep: 60S ribosomal protein L15 -
Caenorhabditis elegans
Length = 204
Score = 108 bits (260), Expect = 7e-23
Identities = 45/85 (52%), Positives = 60/85 (70%)
Frame = +2
Query: 254 IAKGATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVIL 433
+ KG TYGKPK+HGVN+LK ++ Q++AE +SYWVA+DS+YK++EV+L
Sbjct: 75 VCKGQTYGKPKTHGVNELKNAKSKQAVAEGRAGRRLGSLRVLNSYWVAEDSTYKFYEVVL 134
Query: 434 VDPSHKAIRRDPKINWIVNAVHKHR 508
+DP HKAIRR+P WI VHKHR
Sbjct: 135 IDPFHKAIRRNPDTQWITKPVHKHR 159
Score = 108 bits (259), Expect = 9e-23
Identities = 44/62 (70%), Positives = 56/62 (90%)
Frame = +3
Query: 33 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQGYV 212
MGAY+Y+QE++RKK SD +R+LLR+R W YRQL+ +HR PRPTRP+KARRLGYRAKQG+V
Sbjct: 1 MGAYKYMQEIWRKKQSDALRYLLRIRTWHYRQLSAVHRVPRPTRPEKARRLGYRAKQGFV 60
Query: 213 VF 218
V+
Sbjct: 61 VY 62
>UniRef50_P41961 Cluster: 60S ribosomal protein L15; n=3;
Eukaryota|Rep: 60S ribosomal protein L15 - Brugia
pahangi (Filarial nematode worm)
Length = 71
Score = 103 bits (247), Expect = 3e-21
Identities = 42/62 (67%), Positives = 54/62 (87%)
Frame = +3
Query: 33 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQGYV 212
MGAYRY+QEL+RKK S+ MR+LLR+R WQYRQLT +HR RPTRP+KARRLGY + +GY+
Sbjct: 1 MGAYRYMQELWRKKKSETMRYLLRIRCWQYRQLTAIHRVSRPTRPEKARRLGYLSNEGYI 60
Query: 213 VF 218
++
Sbjct: 61 IY 62
>UniRef50_Q9HSL2 Cluster: 50S ribosomal protein L15e; n=6;
Euryarchaeota|Rep: 50S ribosomal protein L15e -
Halobacterium salinarium (Halobacterium halobium)
Length = 196
Score = 75.4 bits (177), Expect = 8e-13
Identities = 34/77 (44%), Positives = 46/77 (59%)
Frame = +2
Query: 278 KPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDPSHKAI 457
+ K GVN++ +NLQ IAEE +SYWV +D S K+FE IL+DP H AI
Sbjct: 83 RTKRQGVNRIGRAKNLQRIAEERASRKYVNLRTLNSYWVGEDGSQKWFEAILLDPEHGAI 142
Query: 458 RRDPKINWIVNAVHKHR 508
+ D +NWI + HK+R
Sbjct: 143 QNDDDLNWICDDSHKNR 159
Score = 43.6 bits (98), Expect = 0.003
Identities = 24/58 (41%), Positives = 32/58 (55%)
Frame = +3
Query: 42 YRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQGYVV 215
Y +I+E + + L R +R+ + R RPTR DKAR LGY+AKQG VV
Sbjct: 6 YSHIKEAWEDPDDGKLAELQWQRKQDWRKEGAIERVDRPTRLDKARELGYKAKQGVVV 63
>UniRef50_O58706 Cluster: 50S ribosomal protein L15e; n=40; cellular
organisms|Rep: 50S ribosomal protein L15e - Pyrococcus
horikoshii
Length = 194
Score = 73.7 bits (173), Expect = 2e-12
Identities = 35/77 (45%), Positives = 43/77 (55%)
Frame = +2
Query: 278 KPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDPSHKAI 457
KP G + P ++LQ IAEE +SYWV +D YK+FEVI+VDP H I
Sbjct: 81 KPSKMGQVKYSPKKSLQWIAEEKAARKFPNLEVLNSYWVGEDGMYKWFEVIMVDPHHPVI 140
Query: 458 RRDPKINWIVNAVHKHR 508
+ DPKI WI HK R
Sbjct: 141 KSDPKIAWIALKHHKGR 157
Score = 57.6 bits (133), Expect = 2e-07
Identities = 26/61 (42%), Positives = 41/61 (67%)
Frame = +3
Query: 33 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQGYV 212
MG Y+YI+E ++ + LL+ R+ ++R+ + R RPTR D+AR LGY+AKQGY+
Sbjct: 1 MGMYKYIREAWKSPKKSYVGQLLKQRMIKWRREPSVVRIERPTRLDRARALGYQAKQGYI 60
Query: 213 V 215
+
Sbjct: 61 I 61
>UniRef50_A2YC64 Cluster: Ribosomal protein L15; n=6; Eukaryota|Rep:
Ribosomal protein L15 - Oryza sativa subsp. indica
(Rice)
Length = 438
Score = 72.5 bits (170), Expect = 6e-12
Identities = 36/58 (62%), Positives = 42/58 (72%)
Frame = +3
Query: 33 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQG 206
MGAYR + EL+R+K SDVM F+ RVR W +R R RPTRPDKARRLG +AKQG
Sbjct: 1 MGAYRCVSELWRRKQSDVMTFVQRVRCWDHR---RQPAIGRPTRPDKARRLGDKAKQG 55
Score = 44.8 bits (101), Expect(2) = 1e-06
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = +2
Query: 419 FEVILVDPSHKAIRRDPKINWIVNAVHKH 505
FE+ILVD +H AIR D +INW+ VHKH
Sbjct: 363 FEIILVDVAHSAIRDDLRINWLCKPVHKH 391
Score = 29.9 bits (64), Expect(2) = 1e-06
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +2
Query: 254 IAKGATYGKPKSHGVNQLKPTRN 322
+ KG Y KPK G+ QLK RN
Sbjct: 334 VPKGIVYSKPKHQGITQLKFQRN 356
>UniRef50_A3H928 Cluster: Ribosomal protein L15e; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L15e -
Caldivirga maquilingensis IC-167
Length = 185
Score = 71.7 bits (168), Expect = 1e-11
Identities = 31/78 (39%), Positives = 45/78 (57%)
Frame = +2
Query: 278 KPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDPSHKAI 457
+PK GV + + NLQ +AE+ SYWV +D+ YK+FEV+++DPSH AI
Sbjct: 81 RPKRMGVYGVALSTNLQVVAEQRAARRFSNLEVLGSYWVGEDAMYKWFEVVMIDPSHPAI 140
Query: 458 RRDPKINWIVNAVHKHRR 511
R DP W+V ++ R
Sbjct: 141 RNDPDYAWVVGKEYREGR 158
Score = 58.8 bits (136), Expect = 7e-08
Identities = 25/61 (40%), Positives = 42/61 (68%)
Frame = +3
Query: 33 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQGYV 212
MG RY+ ++++K D +R +++ R+ ++R+ + R +PTR DKAR+ GY+AKQG V
Sbjct: 1 MGTLRYVADIWKKPYEDPLRQVIKARLIKWRREPAILRVDKPTRIDKARKYGYKAKQGVV 60
Query: 213 V 215
V
Sbjct: 61 V 61
>UniRef50_UPI00015BB1DC Cluster: LSU ribosomal protein L15E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L15E - Ignicoccus hospitalis KIN4/I
Length = 245
Score = 70.5 bits (165), Expect = 2e-11
Identities = 32/77 (41%), Positives = 44/77 (57%)
Frame = +2
Query: 278 KPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDPSHKAI 457
+PK GV P ++ + IAEE +SYWVA+D Y+++EVILVDP H AI
Sbjct: 103 RPKRMGVYGYAPAKSTRLIAEERAARKYPGLEVLNSYWVAEDGEYEWYEVILVDPHHPAI 162
Query: 458 RRDPKINWIVNAVHKHR 508
DP++ WI H+ R
Sbjct: 163 CSDPELKWICEKQHRGR 179
Score = 49.6 bits (113), Expect = 5e-05
Identities = 23/65 (35%), Positives = 40/65 (61%)
Frame = +3
Query: 21 QAAKMGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAK 200
Q+ G Y +++E +++ L++ R+ ++R+ + R +PTR D+AR LGY+AK
Sbjct: 19 QSMARGLYHFLREQWKRPFDGEHGELMKQRIIKWRREPAVVRIEKPTRLDRARALGYKAK 78
Query: 201 QGYVV 215
QG VV
Sbjct: 79 QGVVV 83
>UniRef50_Q4JB20 Cluster: 50S ribosomal protein L15e; n=4;
Thermoprotei|Rep: 50S ribosomal protein L15e -
Sulfolobus acidocaldarius
Length = 217
Score = 67.7 bits (158), Expect = 2e-10
Identities = 31/77 (40%), Positives = 46/77 (59%)
Frame = +2
Query: 278 KPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDPSHKAI 457
+PK GV P++ + IAEE SY+VA+D YKY+EVI+VD SH I
Sbjct: 81 RPKRMGVYGYGPSKGYRWIAEERAARKFPNLEVLGSYYVAEDGMYKYYEVIMVDYSHPVI 140
Query: 458 RRDPKINWIVNAVHKHR 508
R DP++ W+ ++V++ R
Sbjct: 141 RSDPELKWLQDSVNRKR 157
Score = 52.0 bits (119), Expect = 8e-06
Identities = 25/61 (40%), Positives = 41/61 (67%)
Frame = +3
Query: 33 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQGYV 212
+ Y YI++ ++ K D R +LR R+ ++R+ + R RPTR ++AR LGY+AKQG+V
Sbjct: 3 LSMYHYIEQTWQNK--DWRRSILRKRLIEWRRQPAITRIDRPTRLNRARALGYKAKQGFV 60
Query: 213 V 215
+
Sbjct: 61 M 61
>UniRef50_UPI0000DA2AC3 Cluster: PREDICTED: hypothetical protein;
n=2; Euarchontoglires|Rep: PREDICTED: hypothetical
protein - Rattus norvegicus
Length = 172
Score = 67.3 bits (157), Expect = 2e-10
Identities = 50/145 (34%), Positives = 73/145 (50%), Gaps = 2/145 (1%)
Frame = -1
Query: 484 DPVDLRIATNGLV*RVHEDNLEILV*RILCNPVRAQHXXXXXXXXXTFLSNGLKVARGLQ 305
DP+ +R++++ + ++EDNL+ + I NPV Q +FLSN LK + +Q
Sbjct: 31 DPLGVRLSSDSFMEWINEDNLKKFICEIFTNPVGIQDSQSSTMVPSSFLSNRLKASGKVQ 90
Query: 304 LVDTMALGLAISGTLSNGRLRPPR--RTRILNTT*PCLAR*PSLRALSGLVGLGARCIRV 131
LV+T+ LAIS TL + +TT L PS LSG +G GA
Sbjct: 91 LVNTVVNRLAISCTLRKWAFSTTTADTNPVKDTTLLSLVSQPS---LSGWMGWGALYSAE 147
Query: 130 N*RYCHTLTRNKKRITSLSFFLYNS 56
N +YC T +K I S FFL++S
Sbjct: 148 NWQYCQQWTLRRKHIMSDCFFLHSS 172
>UniRef50_Q8ZWD8 Cluster: 50S ribosomal protein L15e; n=4;
Pyrobaculum|Rep: 50S ribosomal protein L15e -
Pyrobaculum aerophilum
Length = 191
Score = 54.0 bits (124), Expect = 2e-06
Identities = 29/84 (34%), Positives = 42/84 (50%)
Frame = +2
Query: 278 KPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDPSHKAI 457
+PK GV + ++ + +AEE +SYWVA D Y+YFEVIL+D + I
Sbjct: 83 RPKRMGVYGITAWKSWRQVAEERAARKHPNLEVLNSYWVADDGIYRYFEVILIDCNLPTI 142
Query: 458 RRDPKINWIVNAVHKHRRCVV*LR 529
+ DP + I RR + LR
Sbjct: 143 KNDPLYSGICGREVPRRRIIRRLR 166
Score = 48.0 bits (109), Expect = 1e-04
Identities = 25/59 (42%), Positives = 37/59 (62%)
Frame = +3
Query: 39 AYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQGYVV 215
AY Y+ YRK +V L+R + ++R+ + R RP R ++AR+LGY+AKQG VV
Sbjct: 5 AYSYMAMWYRKIGREVHERLMRKILIEWRKAPAIVRVERPFRLERARKLGYKAKQGVVV 63
>UniRef50_A7PSH3 Cluster: Chromosome chr6 scaffold_28, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr6 scaffold_28, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 313
Score = 52.0 bits (119), Expect = 8e-06
Identities = 27/67 (40%), Positives = 39/67 (58%)
Frame = +2
Query: 278 KPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDPSHKAI 457
+P + GV QLK RN + EE + + +DS+YKY+E+ILVD +H AI
Sbjct: 2 EPTNQGVTQLKFHRNKSLVTEERDGRKL------AGLKINEDSTYKYYEIILVDVAHSAI 55
Query: 458 RRDPKIN 478
+ DP+IN
Sbjct: 56 QNDPRIN 62
>UniRef50_A0RW64 Cluster: Ribosomal protein L15E; n=2;
Crenarchaeota|Rep: Ribosomal protein L15E - Cenarchaeum
symbiosum
Length = 152
Score = 50.8 bits (116), Expect = 2e-05
Identities = 24/72 (33%), Positives = 39/72 (54%)
Frame = +2
Query: 278 KPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDPSHKAI 457
+PK GV ++K +++ +A SY+V +D +Y +FEVIL DPSH +
Sbjct: 78 RPKHLGVTRIKADVSMKQVAVRRVLERYPNMSLLGSYFVYKDGAYYWFEVILADPSHPRV 137
Query: 458 RRDPKINWIVNA 493
+DP++ V A
Sbjct: 138 AKDPELRDRVGA 149
Score = 42.3 bits (95), Expect = 0.007
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = +3
Query: 99 LRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQGYVV 215
+R RV +R+ + R RPTR D+AR LGY+AKQG VV
Sbjct: 20 IRDRVIIWRKQNAVTRIERPTRIDRARSLGYKAKQGIVV 58
>UniRef50_A7DNS0 Cluster: Ribosomal protein L15e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
L15e - Candidatus Nitrosopumilus maritimus SCM1
Length = 190
Score = 48.0 bits (109), Expect = 1e-04
Identities = 20/66 (30%), Positives = 36/66 (54%)
Frame = +2
Query: 278 KPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDPSHKAI 457
+PK GV ++K N++++AE SY++ +D + +FEVIL DP H +
Sbjct: 117 RPKHLGVTRIKADDNMKTVAERRVSERYPNMKLLGSYFIYKDGKHYWFEVILADPDHPRV 176
Query: 458 RRDPKI 475
+D ++
Sbjct: 177 AQDKEL 182
Score = 40.7 bits (91), Expect = 0.021
Identities = 19/39 (48%), Positives = 27/39 (69%)
Frame = +3
Query: 99 LRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQGYVV 215
LR RV +R+ + R +P+R +ARRLGY+AKQG +V
Sbjct: 59 LRERVVGWRKQNAVTRIDKPSRIQRARRLGYKAKQGVIV 97
>UniRef50_O23581 Cluster: Putative uncharacterized protein dl4725w;
n=1; Arabidopsis thaliana|Rep: Putative uncharacterized
protein dl4725w - Arabidopsis thaliana (Mouse-ear cress)
Length = 520
Score = 39.5 bits (88), Expect = 0.048
Identities = 18/40 (45%), Positives = 30/40 (75%)
Frame = -1
Query: 508 TMLMYSIHDPVDLRIATNGLV*RVHEDNLEILV*RILCNP 389
++L++ + DPVD I ++G+V RV++DNL +LV R+L P
Sbjct: 469 SVLVHRVADPVDPWIISDGIVCRVYKDNLVVLVGRVLRKP 508
>UniRef50_UPI0000494D88 Cluster: PREDICTED: hypothetical protein
isoform 2; n=1; Pan troglodytes|Rep: PREDICTED:
hypothetical protein isoform 2 - Pan troglodytes
Length = 110
Score = 36.7 bits (81), Expect = 0.34
Identities = 20/59 (33%), Positives = 31/59 (52%)
Frame = -1
Query: 484 DPVDLRIATNGLV*RVHEDNLEILV*RILCNPVRAQHXXXXXXXXXTFLSNGLKVARGL 308
DP+ +RI+++ + ++EDNL + I NPVR Q + L NGLK + L
Sbjct: 52 DPLGVRISSDSFMEWINEDNLRKFLCGIFTNPVRIQDAQSPMVASSSLLCNGLKASSKL 110
>UniRef50_A1K3L4 Cluster: General secretion pathway protein F; n=1;
Azoarcus sp. BH72|Rep: General secretion pathway protein
F - Azoarcus sp. (strain BH72)
Length = 401
Score = 33.1 bits (72), Expect = 4.2
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = -1
Query: 337 SNGLKVARGL-QLVDTMALGLAISGTLSNGRLRPPRRTRIL 218
+ L V GL Q+ D +A G +SG L++ R+ PPR TR+L
Sbjct: 294 AGNLVVRTGLEQVADDIAAGADLSGALASTRVFPPRVTRML 334
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 583,603,684
Number of Sequences: 1657284
Number of extensions: 11849487
Number of successful extensions: 28412
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 27586
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28408
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 34572633001
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -