Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20593
         (541 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094841-1|AAM11194.1|  204|Drosophila melanogaster RE01373p pro...   128   4e-30
AF030251-1|AAB84223.1|  204|Drosophila melanogaster ribosomal L1...   128   4e-30
AE013599-3185|AAG22188.1| 1542|Drosophila melanogaster CG9485-PA...    28   9.4  
AE013599-3184|AAF46713.3| 1546|Drosophila melanogaster CG9485-PC...    28   9.4  
AE013599-3183|AAM70868.2| 1629|Drosophila melanogaster CG9485-PB...    28   9.4  

>AY094841-1|AAM11194.1|  204|Drosophila melanogaster RE01373p
           protein.
          Length = 204

 Score =  128 bits (310), Expect = 4e-30
 Identities = 58/85 (68%), Positives = 63/85 (74%)
 Frame = +2

Query: 254 IAKGATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVIL 433
           + KG TYGKPKSHGVNQLKP R LQSIAEE            +SYW+AQD+SYKYFEVIL
Sbjct: 75  VPKGCTYGKPKSHGVNQLKPYRGLQSIAEERVGRRLGGLRVLNSYWIAQDASYKYFEVIL 134

Query: 434 VDPSHKAIRRDPKINWIVNAVHKHR 508
           +D  H AIRRDPKINWI   VHKHR
Sbjct: 135 IDTHHSAIRRDPKINWICKHVHKHR 159



 Score =  123 bits (297), Expect = 1e-28
 Identities = 52/62 (83%), Positives = 61/62 (98%)
 Frame = +3

Query: 33  MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQGYV 212
           MGAYRY+QELYRKK SDVMR+LLR+RVWQYRQLT++HR+PRPTRPDKARRLGYRAKQG+V
Sbjct: 1   MGAYRYMQELYRKKQSDVMRYLLRIRVWQYRQLTKLHRSPRPTRPDKARRLGYRAKQGFV 60

Query: 213 VF 218
           ++
Sbjct: 61  IY 62


>AF030251-1|AAB84223.1|  204|Drosophila melanogaster ribosomal L15
           (YL10) protein homologueprotein.
          Length = 204

 Score =  128 bits (310), Expect = 4e-30
 Identities = 58/85 (68%), Positives = 63/85 (74%)
 Frame = +2

Query: 254 IAKGATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVIL 433
           + KG TYGKPKSHGVNQLKP R LQSIAEE            +SYW+AQD+SYKYFEVIL
Sbjct: 75  VPKGCTYGKPKSHGVNQLKPYRGLQSIAEERVGRRLGGLRVLNSYWIAQDASYKYFEVIL 134

Query: 434 VDPSHKAIRRDPKINWIVNAVHKHR 508
           +D  H AIRRDPKINWI   VHKHR
Sbjct: 135 IDTHHSAIRRDPKINWICKHVHKHR 159



 Score =  123 bits (297), Expect = 1e-28
 Identities = 52/62 (83%), Positives = 61/62 (98%)
 Frame = +3

Query: 33  MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQGYV 212
           MGAYRY+QELYRKK SDVMR+LLR+RVWQYRQLT++HR+PRPTRPDKARRLGYRAKQG+V
Sbjct: 1   MGAYRYMQELYRKKQSDVMRYLLRIRVWQYRQLTKLHRSPRPTRPDKARRLGYRAKQGFV 60

Query: 213 VF 218
           ++
Sbjct: 61  IY 62


>AE013599-3185|AAG22188.1| 1542|Drosophila melanogaster CG9485-PA,
           isoform A protein.
          Length = 1542

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 15/56 (26%), Positives = 26/56 (46%)
 Frame = +2

Query: 176 PKTRLPC*TRLCCIQNPCATWWPQASIAKGATYGKPKSHGVNQLKPTRNLQSIAEE 343
           P   + C T L  +  P  TW P+  +AK A Y       + +L  +R+  S+ ++
Sbjct: 146 PLDSVRCQTVLAKLLGPLDTWEPKLRVAKEAGYNVIHFTPIQELGGSRSCYSLRDQ 201


>AE013599-3184|AAF46713.3| 1546|Drosophila melanogaster CG9485-PC,
           isoform C protein.
          Length = 1546

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 15/56 (26%), Positives = 26/56 (46%)
 Frame = +2

Query: 176 PKTRLPC*TRLCCIQNPCATWWPQASIAKGATYGKPKSHGVNQLKPTRNLQSIAEE 343
           P   + C T L  +  P  TW P+  +AK A Y       + +L  +R+  S+ ++
Sbjct: 150 PLDSVRCQTVLAKLLGPLDTWEPKLRVAKEAGYNVIHFTPIQELGGSRSCYSLRDQ 205


>AE013599-3183|AAM70868.2| 1629|Drosophila melanogaster CG9485-PB,
           isoform B protein.
          Length = 1629

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 15/56 (26%), Positives = 26/56 (46%)
 Frame = +2

Query: 176 PKTRLPC*TRLCCIQNPCATWWPQASIAKGATYGKPKSHGVNQLKPTRNLQSIAEE 343
           P   + C T L  +  P  TW P+  +AK A Y       + +L  +R+  S+ ++
Sbjct: 233 PLDSVRCQTVLAKLLGPLDTWEPKLRVAKEAGYNVIHFTPIQELGGSRSCYSLRDQ 288


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,326,104
Number of Sequences: 53049
Number of extensions: 561933
Number of successful extensions: 1450
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1386
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1450
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2053700352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)