Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20592
         (650 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   1.6  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   5.0  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   5.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.8  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +2

Query: 116 EGLCKWIASFLDGRSITVVV 175
           EGLCK + S LD +   VVV
Sbjct: 558 EGLCKVMKSILDNKVEKVVV 577


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 200 TINAGVPQGSVLSP 241
           T + G+PQG VL+P
Sbjct: 442 TYDYGIPQGVVLNP 455


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 200 TINAGVPQGSVLSP 241
           T + G+PQG VL+P
Sbjct: 442 TYDYGIPQGVVLNP 455


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 16/55 (29%), Positives = 22/55 (40%)
 Frame = +1

Query: 259 INDMLSIDGMHCYADDSTGDARYIGHQSLSRSVVQERRSKLVSEVENSLGRVSKW 423
           I DML  +G H   D+S       G Q +     +    K+    E +LG V  W
Sbjct: 459 ICDMLLNEGWHKGMDESGSPYMVYGDQWVGYDDSESVEKKVNYVQEMNLGGVFIW 513


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,556
Number of Sequences: 336
Number of extensions: 3764
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)