Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20592
(650 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1291 + 25545749-25546262,25546989-25547669,25547693-255477... 52 4e-07
06_02_0297 - 13891954-13892556,13893019-13893855,13894179-138943... 50 1e-06
07_01_0242 + 1775704-1776797,1776839-1777759,1778312-1778412,177... 46 3e-05
02_02_0078 + 6587491-6588021,6588160-6589151,6592430-6592607,659... 40 0.002
08_02_0104 + 12404890-12405129,12405244-12405333,12405953-124060... 32 0.46
01_01_0753 - 5814087-5814344,5814461-5814646,5814847-5815004,581... 31 0.80
02_04_0485 + 23338980-23339187,23339277-23339305,23339962-233400... 30 1.4
02_04_0482 + 23291986-23292181,23292289-23292317,23293500-232936... 30 1.4
03_02_0091 + 5574528-5577254 30 1.8
04_04_1128 + 31103582-31103709,31105231-31105344,31105906-311064... 29 3.2
01_06_0785 - 31985455-31988463 29 3.2
07_03_0845 - 21979581-21981281 29 4.2
05_06_0286 + 26932395-26933155,26934287-26934407,26934496-269347... 29 4.2
02_02_0604 - 12064451-12065683,12065729-12065827,12065858-120659... 28 5.6
09_04_0083 - 14418907-14419287 28 7.4
07_01_0160 + 1126674-1126937,1128442-1129998 28 7.4
07_01_0158 + 1111819-1111972,1113311-1114869 28 7.4
02_01_0473 - 3403547-3404241,3404455-3404983,3405299-3405477,340... 28 7.4
10_08_0858 - 21108283-21108387,21108820-21108889,21109490-211096... 27 9.8
05_06_0279 + 26896997-26897457,26898100-26898220,26898310-268985... 27 9.8
04_03_0658 + 18447986-18448117,18448204-18448317,18448388-184485... 27 9.8
02_05_0525 + 29764176-29764518,29765351-29765679 27 9.8
>07_03_1291 +
25545749-25546262,25546989-25547669,25547693-25547751,
25549152-25549242,25549330-25549743,25550191-25550243,
25550947-25551177,25551492-25551708,25551790-25551890,
25552446-25552532,25553536-25553676,25553839-25553961,
25554070-25554522,25554931-25555308,25555410-25556060,
25556264-25556368,25556482-25556707,25557204-25557241
Length = 1520
Score = 52.0 bits (119), Expect = 4e-07
Identities = 29/82 (35%), Positives = 41/82 (50%)
Frame = +2
Query: 17 KGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDT 196
K + L + LD AKAFD V ++L L G P+ WI + L V++ G
Sbjct: 33 KCQTLIIKLDFAKAFDSVNWQSLFQILSVKGFPDNWISWIKNLLQTSKSAVLLHGIPGKW 92
Query: 197 MTINAGVPQGSVLSPTLFIRIS 262
+T G+ QG LSP LFI ++
Sbjct: 93 ITCKKGLRQGDPLSPYLFILVA 114
>06_02_0297 -
13891954-13892556,13893019-13893855,13894179-13894394,
13895455-13895874,13896198-13896506
Length = 794
Score = 50.4 bits (115), Expect = 1e-06
Identities = 27/81 (33%), Positives = 41/81 (50%)
Frame = +2
Query: 11 ESKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCS 190
+SK E + + LD KAFD + H A+LS + G P +W+ S V+++G
Sbjct: 446 QSKREIVLLKLDFEKAFDTIEHSAILSVMQHMGFPLKWIEWVQMVFSTASSAVLLNGVPG 505
Query: 191 DTMTINAGVPQGSVLSPTLFI 253
++ GV QG LS LF+
Sbjct: 506 NSFKCRRGVRQGVPLSLLLFV 526
>07_01_0242 + 1775704-1776797,1776839-1777759,1778312-1778412,
1778770-1778900,1779530-1779788,1779823-1780098,
1780100-1781352
Length = 1344
Score = 45.6 bits (103), Expect = 3e-05
Identities = 27/82 (32%), Positives = 37/82 (45%)
Frame = +2
Query: 17 KGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDT 196
K + + V LD KAFD V +L L G PE WI L V+++G
Sbjct: 1048 KCQTIIVKLDFTKAFDSVIWSSLFKILAVRGFPENWISWIKGLLSSSKSAVLLNGVPGRW 1107
Query: 197 MTINAGVPQGSVLSPTLFIRIS 262
+ G+ QG LS LFI ++
Sbjct: 1108 ICCKKGLLQGDPLSSYLFILVA 1129
>02_02_0078 +
6587491-6588021,6588160-6589151,6592430-6592607,
6592635-6592794,6592992-6593158,6593246-6593869
Length = 883
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/101 (22%), Positives = 47/101 (46%)
Frame = +2
Query: 14 SKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSD 193
+K A+ +D+ KA+DR+ L L G + + + + ++G+ +D
Sbjct: 248 NKKPFFALKIDMMKAYDRIEWSYLHGCLMRLGFEQDWINTVMRCVTSTRYAIRINGELTD 307
Query: 194 TMTINAGVPQGSVLSPTLFIRISMTCCLLMACIAMRMTARG 316
T+ + G+ QG +SP LF + C ++C+ + +G
Sbjct: 308 TVVPSRGIRQGDPISPYLF----LLCTEGLSCMLQKKEQQG 344
>08_02_0104 + 12404890-12405129,12405244-12405333,12405953-12406036,
12406888-12407132,12409032-12409095,12409270-12409968,
12410063-12410176,12410287-12410418,12410594-12410770,
12411085-12411138,12411230-12411292,12411396-12412307,
12412408-12412535,12413680-12413962
Length = 1094
Score = 31.9 bits (69), Expect = 0.46
Identities = 19/84 (22%), Positives = 35/84 (41%)
Frame = +2
Query: 14 SKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSD 193
S E + ++ D +H + + G+ + L W A +G + +V D +CS
Sbjct: 886 SNSEDMLSPAELPFMIDLDYHTQIEYRWGGEGLRKTLICWAAEKSEGGQVVLVEDEECSS 945
Query: 194 TMTINAGVPQGSVLSPTLFIRISM 265
T I+ V + P +R +M
Sbjct: 946 TYCISFRVKNAEAVPPVKELRKTM 969
>01_01_0753 -
5814087-5814344,5814461-5814646,5814847-5815004,
5815082-5815214,5815299-5815489,5815826-5816281,
5816543-5816661,5816729-5816872,5816994-5817065,
5817368-5817500,5817598-5817733
Length = 661
Score = 31.1 bits (67), Expect = 0.80
Identities = 16/64 (25%), Positives = 26/64 (40%)
Frame = +2
Query: 2 EDLESKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDG 181
ED S+ E F + + KLP + +C W A +L G+S + +VD
Sbjct: 533 EDSSSRSECPPDIASNVYCFGTLLIEIISGKLPEADDQKSMCNWAAEYLKGKSYSKLVDA 592
Query: 182 DCSD 193
+
Sbjct: 593 SLKE 596
>02_04_0485 + 23338980-23339187,23339277-23339305,23339962-23340064,
23340311-23340482,23340880-23340940,23341257-23341389,
23341938-23342208,23342595-23342734,23342912-23342998,
23343078-23343586,23343671-23344488,23344522-23344720,
23345552-23345696,23345728-23345782,23347652-23347778,
23347867-23347936,23348448-23348553,23348636-23348747,
23349243-23349365,23349468-23349627,23349751-23349827,
23349925-23349977,23350151-23350205,23350500-23351174
Length = 1495
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/65 (32%), Positives = 33/65 (50%)
Frame = +1
Query: 229 GALPHAFHPYINDMLSIDGMHCYADDSTGDARYIGHQSLSRSVVQERRSKLVSEVENSLG 408
G H P + +S +G DS+G A+ + SLS + ++R+SK S + NSL
Sbjct: 930 GTTSHRMGPLLERWISREG-RSDGGDSSGPAQPLFRISLSLASQEQRQSKASSAMGNSLP 988
Query: 409 RVSKW 423
SK+
Sbjct: 989 VESKF 993
>02_04_0482 + 23291986-23292181,23292289-23292317,23293500-23293602,
23293855-23293979,23294788-23294920,23295468-23295739,
23295806-23295873,23296126-23296265,23296443-23296529,
23296610-23297118,23297203-23298020,23298054-23298252,
23299084-23299228,23299260-23299314,23301184-23301310,
23301399-23301468,23301980-23302085,23302168-23302279,
23302775-23302897,23303000-23303159,23303283-23303359,
23303457-23303509,23303683-23303737,23304032-23304706
Length = 1478
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/65 (32%), Positives = 33/65 (50%)
Frame = +1
Query: 229 GALPHAFHPYINDMLSIDGMHCYADDSTGDARYIGHQSLSRSVVQERRSKLVSEVENSLG 408
G H P + +S +G DS+G A+ + SLS + ++R+SK S + NSL
Sbjct: 913 GTTSHRMGPLLERWISREG-RSDGGDSSGPAQPLFRISLSLASQEQRQSKASSAMGNSLP 971
Query: 409 RVSKW 423
SK+
Sbjct: 972 VESKF 976
>03_02_0091 + 5574528-5577254
Length = 908
Score = 29.9 bits (64), Expect = 1.8
Identities = 21/71 (29%), Positives = 32/71 (45%)
Frame = +2
Query: 8 LESKGEALAVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDC 187
L++ G+ AV K D + HR L LP G P+ + I L S +++DG
Sbjct: 212 LDAPGDCAAVG----KMQDAMAHRLGLCALPDGGAPDHRARPIFEVLRDSSFLLLLDGVT 267
Query: 188 SDTMTINAGVP 220
++ GVP
Sbjct: 268 KPVDLVDIGVP 278
>04_04_1128 +
31103582-31103709,31105231-31105344,31105906-31106446,
31106911-31107003,31107041-31107194,31107296-31107498
Length = 410
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +1
Query: 430 LNLVQFNPIKTQVCAFTAKKDPFVMARNSKEYPCNFLRV 546
+ ++ +P+K Q D F+++ N+ E CNF R+
Sbjct: 229 VTVISTSPVKRQEALERLGADGFIVSTNASEMKCNFARL 267
>01_06_0785 - 31985455-31988463
Length = 1002
Score = 29.1 bits (62), Expect = 3.2
Identities = 24/60 (40%), Positives = 30/60 (50%)
Frame = +3
Query: 471 RVHCEEGPLCHGAQFQGVSLQLSESIGILGVDISSDVQFRSHLEGKAKLASKMLGVLNRA 650
RV EE P A F G +LSE IL D+S D + R + E K K K L V+ R+
Sbjct: 351 RVEKEEFPFPRNADFVGRKKELSELELILFGDVSGDGE-REYFEIKTKQRRKGL-VIGRS 408
>07_03_0845 - 21979581-21981281
Length = 566
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/28 (42%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Frame = +1
Query: 520 EYPCNFLRVLGYLGSTFRAMSSFG-VIW 600
E+ + +R++ LGSTF A+ +FG +IW
Sbjct: 443 EHKTHHMRLIAVLGSTFVALCAFGAIIW 470
>05_06_0286 +
26932395-26933155,26934287-26934407,26934496-26934772,
26934934-26935094
Length = 439
Score = 28.7 bits (61), Expect = 4.2
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +2
Query: 470 ARSLRRRTPLSWRAIPRSIP 529
A + R+RTP WR IPR++P
Sbjct: 164 APARRKRTPGRWRRIPRTLP 183
>02_02_0604 -
12064451-12065683,12065729-12065827,12065858-12065955,
12066782-12066924,12067233-12067729
Length = 689
Score = 28.3 bits (60), Expect = 5.6
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +2
Query: 125 CKWIASFLDGRSITVVVDGDCSDTMTINAGVPQGSVLSPTLFIRISMTCCLL 280
CK + L+ I + +G SD G+ QG LSP LF+ +M+ LL
Sbjct: 205 CKKLRYLLEETRIDI--NGTLSDPFKPMRGLRQGDPLSPLLFVLKAMSAGLL 254
>09_04_0083 - 14418907-14419287
Length = 126
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/55 (23%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = +2
Query: 134 IASFLDGRS-ITVVVDGDCSDTMTINAGVPQGSVLSPTLFIRISMTCCLLMACIA 295
+A LDG + +C + AG ++SP F+ + C ++ C A
Sbjct: 70 LADLLDGGDGAATICPSNCQKCLVKCAGTCVADIVSPPTFVACFLKCAVVKLCFA 124
>07_01_0160 + 1126674-1126937,1128442-1129998
Length = 606
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +3
Query: 486 EGPLCHGAQFQGVSLQLSESIGILGVDISSDVQFRSHLEGKAKLASKMLGVL 641
+G G G+ LQLSES I+G I F H + + K L +L
Sbjct: 301 DGTASEGNFILGMLLQLSESTNIVGTIIKGLQLFTPHFKSTTENVRKQLTLL 352
>07_01_0158 + 1111819-1111972,1113311-1114869
Length = 570
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 513 FQGVSLQLSESIGILGVDISSDVQFRSHLEGKAKLASKMLGVL 641
F G+ LQ+SES I+G I F H E + K L +L
Sbjct: 275 FLGMILQISESTNIVGTIIKCLQLFAPHFESVTETVRKELTLL 317
>02_01_0473 -
3403547-3404241,3404455-3404983,3405299-3405477,
3405868-3405952,3406136-3406482,3407061-3407159,
3408135-3408636
Length = 811
Score = 27.9 bits (59), Expect = 7.4
Identities = 26/77 (33%), Positives = 34/77 (44%)
Frame = +2
Query: 32 AVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGDCSDTMTINA 211
A+ LD++KA+DRV L L G + KW S C D I
Sbjct: 235 ALKLDLSKAYDRVDWAFLDGVLQRMGFGDTWRKWTMS--------------CVDICPIR- 279
Query: 212 GVPQGSVLSPTLFIRIS 262
G+ QG LSP LF+ I+
Sbjct: 280 GLRQGDPLSPYLFLFIA 296
>10_08_0858 -
21108283-21108387,21108820-21108889,21109490-21109646,
21109930-21110062,21110409-21110583,21113353-21113453,
21113620-21113706,21115871-21115931,21116114-21116178,
21116534-21117631
Length = 683
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +1
Query: 241 HAFHPYINDMLSIDGMHCYADDSTGDARYIGHQSLSRSVVQERRS 375
H+FH + + SID + D ++ RY+ H ++ + VV R+
Sbjct: 282 HSFHSAVYLLESIDAVGTDPDTASKIERYLIHPAIEQCVVASHRA 326
>05_06_0279 +
26896997-26897457,26898100-26898220,26898310-26898586,
26898735-26898895
Length = 339
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +2
Query: 470 ARSLRRRTPLSWRAIPRSIP 529
A + ++RTP WR IPR++P
Sbjct: 64 APARKKRTPGRWRRIPRTLP 83
>04_03_0658 +
18447986-18448117,18448204-18448317,18448388-18448507,
18448589-18449215,18449289-18449462,18449545-18449809,
18449889-18449959,18450043-18450145,18450221-18450280,
18450533-18450744,18450830-18450901,18451446-18451502,
18451598-18451882,18452359-18452371,18452396-18452463,
18452649-18452747,18452836-18452967,18453038-18453141,
18453234-18453423,18453519-18453524
Length = 967
Score = 27.5 bits (58), Expect = 9.8
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Frame = +2
Query: 35 VSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVVVDGD----CSDTMT 202
+S+ + R ++LL+ S+ +P WIA+ +D S +VVD D +
Sbjct: 151 LSVHDKEVIGRTCFKSLLNFQSSF-VPNQFASWIANHVDVSSSDIVVDDKVIPLTEDCVH 209
Query: 203 INAGVPQGSV 232
I G+P G +
Sbjct: 210 IILGLPVGGI 219
>02_05_0525 + 29764176-29764518,29765351-29765679
Length = 223
Score = 27.5 bits (58), Expect = 9.8
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +2
Query: 32 AVSLDIAKAFDRVWHRALLSKLPSYGIPEGLCKWIASFLDGRSITVV 172
AV+ D+ A R RA L+ G E +C+W+A L+ R + +V
Sbjct: 65 AVTFDMRGA-GRSTGRASLTGSTEVGDVEAVCRWVADNLNPRGVLLV 110
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,427,451
Number of Sequences: 37544
Number of extensions: 478015
Number of successful extensions: 1460
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1418
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1460
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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