Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20592
         (650 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    28   0.090
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    28   0.090
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    25   0.84 
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    25   0.84 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             24   1.1  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   5.9  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   7.8  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 27.9 bits (59), Expect = 0.090
 Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
 Frame = -3

Query: 537 KVAGILLGIARHDKGVLLRSERANLCLYRVELNQVQFTPFGDSPQR--VLHFR 385
           K+ G+   +A +D+GV  ++   N+       ++V+F   GD   R  +L+FR
Sbjct: 354 KLKGLCPSMANYDRGVFYKNYLLNVSFIDAAGSEVKFDEHGDGLARYEILNFR 406


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 27.9 bits (59), Expect = 0.090
 Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
 Frame = -3

Query: 537 KVAGILLGIARHDKGVLLRSERANLCLYRVELNQVQFTPFGDSPQR--VLHFR 385
           K+ G+   +A +D+GV  ++   N+       ++V+F   GD   R  +L+FR
Sbjct: 444 KLKGLCPSMANYDRGVFYKNYLLNVSFIDAAGSEVKFDEHGDGLARYEILNFR 496


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 24.6 bits (51), Expect = 0.84
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = -2

Query: 436 SSIHPIWRLAPESSPLQTQVLIVSLAPRSERDSDG 332
           S +   W+  PE+  L+  +++  + PRS +DS+G
Sbjct: 13  SIVDAAWKPLPEN--LKEDLIVYQVYPRSFKDSNG 45


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 24.6 bits (51), Expect = 0.84
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = -2

Query: 436 SSIHPIWRLAPESSPLQTQVLIVSLAPRSERDSDG 332
           S +   W+  PE+  L+  +++  + PRS +DS+G
Sbjct: 13  SIVDAAWKPLPEN--LKEDLIVYQVYPRSFKDSNG 45


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 14/56 (25%), Positives = 24/56 (42%)
 Frame = -3

Query: 333 ADISRIPRAVIRIAMHAINRQHVIDIRMKSVGESTEPCGTPALMVMVSEQSPSTTT 166
           A I  IPR+ +R  ++ +  +   D  + S        G PA  +     + +TTT
Sbjct: 614 AVIYGIPRSTLRNKVYKLAMERERDASLSSTHSHPHEPGAPATTITTITTTTTTTT 669


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -1

Query: 317 SPVLSSA*QCMPSIDSMSLI 258
           +PVL S  Q  PSIDS + I
Sbjct: 531 TPVLPSRFQSHPSIDSANTI 550


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +1

Query: 361 QERRSKLVSEVENSLGRVSKW 423
           QER S+LV  +EN    V  W
Sbjct: 465 QERESELVPYLENKGNGVYAW 485


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,765
Number of Sequences: 438
Number of extensions: 4397
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)