Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20590
(640 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061090-1|AAL28638.1| 90|Drosophila melanogaster LD07775p pro... 93 4e-19
AF218862-1|AAF31702.1| 90|Drosophila melanogaster Smt3 protein. 93 4e-19
AF053083-1|AAD19219.1| 90|Drosophila melanogaster ubiquitin-li... 93 4e-19
AE014134-1209|AAF52470.1| 90|Drosophila melanogaster CG4494-PA... 93 4e-19
BT003801-1|AAO41484.1| 504|Drosophila melanogaster AT23571p pro... 29 7.0
AY118950-1|AAM50810.1| 422|Drosophila melanogaster LD33701p pro... 29 7.0
AY075378-1|AAL68219.1| 163|Drosophila melanogaster LD08233p pro... 29 7.0
AY051541-1|AAK92965.1| 518|Drosophila melanogaster GH19118p pro... 29 7.0
AJ294538-1|CAC82378.1| 660|Drosophila melanogaster Lasp protein... 29 7.0
AE014297-3299|AAF56116.2| 424|Drosophila melanogaster CG4449-PA... 29 7.0
AE014296-2785|AAN11739.2| 657|Drosophila melanogaster CG3849-PB... 29 7.0
AE014296-2784|AAF49426.3| 504|Drosophila melanogaster CG3849-PA... 29 7.0
AE014296-1795|AAN11920.1| 518|Drosophila melanogaster CG6640-PB... 29 7.0
AE014296-1794|AAF50173.1| 916|Drosophila melanogaster CG6640-PA... 29 7.0
>AY061090-1|AAL28638.1| 90|Drosophila melanogaster LD07775p
protein.
Length = 90
Score = 92.7 bits (220), Expect = 4e-19
Identities = 43/48 (89%), Positives = 46/48 (95%), Gaps = 1/48 (2%)
Frame = +1
Query: 115 MADEKKG-ENEHINLKVLGQDNAIVQFKIKKHTPLRKLMHAYCDRAGL 255
M+DEKKG E EHINLKVLGQDNA+VQFKIKKHTPLRKLM+AYCDRAGL
Sbjct: 1 MSDEKKGGETEHINLKVLGQDNAVVQFKIKKHTPLRKLMNAYCDRAGL 48
Score = 85.4 bits (202), Expect = 6e-17
Identities = 39/40 (97%), Positives = 39/40 (97%)
Frame = +3
Query: 255 SMQVVRFRFDGQPINGNDTPTSLEMEEGDTIEVYQQQTGG 374
SMQVVRFRFDGQPIN NDTPTSLEMEEGDTIEVYQQQTGG
Sbjct: 49 SMQVVRFRFDGQPINENDTPTSLEMEEGDTIEVYQQQTGG 88
>AF218862-1|AAF31702.1| 90|Drosophila melanogaster Smt3 protein.
Length = 90
Score = 92.7 bits (220), Expect = 4e-19
Identities = 43/48 (89%), Positives = 46/48 (95%), Gaps = 1/48 (2%)
Frame = +1
Query: 115 MADEKKG-ENEHINLKVLGQDNAIVQFKIKKHTPLRKLMHAYCDRAGL 255
M+DEKKG E EHINLKVLGQDNA+VQFKIKKHTPLRKLM+AYCDRAGL
Sbjct: 1 MSDEKKGGETEHINLKVLGQDNAVVQFKIKKHTPLRKLMNAYCDRAGL 48
Score = 85.4 bits (202), Expect = 6e-17
Identities = 39/40 (97%), Positives = 39/40 (97%)
Frame = +3
Query: 255 SMQVVRFRFDGQPINGNDTPTSLEMEEGDTIEVYQQQTGG 374
SMQVVRFRFDGQPIN NDTPTSLEMEEGDTIEVYQQQTGG
Sbjct: 49 SMQVVRFRFDGQPINENDTPTSLEMEEGDTIEVYQQQTGG 88
>AF053083-1|AAD19219.1| 90|Drosophila melanogaster ubiquitin-like
protein SMT3 protein.
Length = 90
Score = 92.7 bits (220), Expect = 4e-19
Identities = 43/48 (89%), Positives = 46/48 (95%), Gaps = 1/48 (2%)
Frame = +1
Query: 115 MADEKKG-ENEHINLKVLGQDNAIVQFKIKKHTPLRKLMHAYCDRAGL 255
M+DEKKG E EHINLKVLGQDNA+VQFKIKKHTPLRKLM+AYCDRAGL
Sbjct: 1 MSDEKKGGETEHINLKVLGQDNAVVQFKIKKHTPLRKLMNAYCDRAGL 48
Score = 85.4 bits (202), Expect = 6e-17
Identities = 39/40 (97%), Positives = 39/40 (97%)
Frame = +3
Query: 255 SMQVVRFRFDGQPINGNDTPTSLEMEEGDTIEVYQQQTGG 374
SMQVVRFRFDGQPIN NDTPTSLEMEEGDTIEVYQQQTGG
Sbjct: 49 SMQVVRFRFDGQPINENDTPTSLEMEEGDTIEVYQQQTGG 88
>AE014134-1209|AAF52470.1| 90|Drosophila melanogaster CG4494-PA
protein.
Length = 90
Score = 92.7 bits (220), Expect = 4e-19
Identities = 43/48 (89%), Positives = 46/48 (95%), Gaps = 1/48 (2%)
Frame = +1
Query: 115 MADEKKG-ENEHINLKVLGQDNAIVQFKIKKHTPLRKLMHAYCDRAGL 255
M+DEKKG E EHINLKVLGQDNA+VQFKIKKHTPLRKLM+AYCDRAGL
Sbjct: 1 MSDEKKGGETEHINLKVLGQDNAVVQFKIKKHTPLRKLMNAYCDRAGL 48
Score = 85.4 bits (202), Expect = 6e-17
Identities = 39/40 (97%), Positives = 39/40 (97%)
Frame = +3
Query: 255 SMQVVRFRFDGQPINGNDTPTSLEMEEGDTIEVYQQQTGG 374
SMQVVRFRFDGQPIN NDTPTSLEMEEGDTIEVYQQQTGG
Sbjct: 49 SMQVVRFRFDGQPINENDTPTSLEMEEGDTIEVYQQQTGG 88
>BT003801-1|AAO41484.1| 504|Drosophila melanogaster AT23571p
protein.
Length = 504
Score = 28.7 bits (61), Expect = 7.0
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +2
Query: 308 HSNIT*DGRGRHNRGLPTADRRSVPSV 388
HSNI +G G N+ LP RRS SV
Sbjct: 237 HSNINNNGHGSQNQMLPPQMRRSAASV 263
>AY118950-1|AAM50810.1| 422|Drosophila melanogaster LD33701p
protein.
Length = 422
Score = 28.7 bits (61), Expect = 7.0
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +3
Query: 261 QVVRFRFDGQPINGNDTPTSLEMEEGDTIEV 353
+ ++ FDG ++ NDTP + +ME + I++
Sbjct: 388 RTIKLFFDGDLLDPNDTPNNQDMEGNEVIDL 418
>AY075378-1|AAL68219.1| 163|Drosophila melanogaster LD08233p
protein.
Length = 163
Score = 28.7 bits (61), Expect = 7.0
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = -2
Query: 144 FVFSLLFISHFEINVVLETINTKL*IDKLIWYLFSQTNA*MTACAMS 4
F+ + L HFE+ VL + K++W+L ++N + A ++
Sbjct: 88 FIVAALCFYHFELVFVLRVTSRGSSTSKVLWFLIGESNRTLAALVLA 134
>AY051541-1|AAK92965.1| 518|Drosophila melanogaster GH19118p
protein.
Length = 518
Score = 28.7 bits (61), Expect = 7.0
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = -3
Query: 614 TYSIWYTYNDLTTSNLRRIMLCVARLCYYVSQNYF 510
TYS + TYND T+ N++ ++ + + + ++F
Sbjct: 223 TYSSYMTYNDFTSENMKGVLSTIYGVLALIMGSFF 257
>AJ294538-1|CAC82378.1| 660|Drosophila melanogaster Lasp protein
protein.
Length = 660
Score = 28.7 bits (61), Expect = 7.0
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +2
Query: 308 HSNIT*DGRGRHNRGLPTADRRSVPSV 388
HSNI +G G N+ LP RRS SV
Sbjct: 393 HSNINNNGHGSQNQMLPPQMRRSAASV 419
>AE014297-3299|AAF56116.2| 424|Drosophila melanogaster CG4449-PA
protein.
Length = 424
Score = 28.7 bits (61), Expect = 7.0
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +3
Query: 261 QVVRFRFDGQPINGNDTPTSLEMEEGDTIEV 353
+ ++ FDG ++ NDTP + +ME + I++
Sbjct: 390 RTIKLFFDGDLLDPNDTPNNQDMEGNEVIDL 420
>AE014296-2785|AAN11739.2| 657|Drosophila melanogaster CG3849-PB,
isoform B protein.
Length = 657
Score = 28.7 bits (61), Expect = 7.0
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +2
Query: 308 HSNIT*DGRGRHNRGLPTADRRSVPSV 388
HSNI +G G N+ LP RRS SV
Sbjct: 390 HSNINNNGHGSQNQMLPPQMRRSAASV 416
>AE014296-2784|AAF49426.3| 504|Drosophila melanogaster CG3849-PA,
isoform A protein.
Length = 504
Score = 28.7 bits (61), Expect = 7.0
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +2
Query: 308 HSNIT*DGRGRHNRGLPTADRRSVPSV 388
HSNI +G G N+ LP RRS SV
Sbjct: 237 HSNINNNGHGSQNQMLPPQMRRSAASV 263
>AE014296-1795|AAN11920.1| 518|Drosophila melanogaster CG6640-PB,
isoform B protein.
Length = 518
Score = 28.7 bits (61), Expect = 7.0
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = -3
Query: 614 TYSIWYTYNDLTTSNLRRIMLCVARLCYYVSQNYF 510
TYS + TYND T+ N++ ++ + + + ++F
Sbjct: 223 TYSSYMTYNDFTSENMKGVLSTIYGVLALIMGSFF 257
>AE014296-1794|AAF50173.1| 916|Drosophila melanogaster CG6640-PA,
isoform A protein.
Length = 916
Score = 28.7 bits (61), Expect = 7.0
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = -3
Query: 614 TYSIWYTYNDLTTSNLRRIMLCVARLCYYVSQNYF 510
TYS + TYND T+ N++ ++ + + + ++F
Sbjct: 621 TYSSYMTYNDFTSENMKGVLSTIYGVLALIMGSFF 655
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,810,710
Number of Sequences: 53049
Number of extensions: 531553
Number of successful extensions: 960
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 929
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 960
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2682985500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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