Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20589
         (691 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.       23   6.9  
AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        23   6.9  
AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydroge...    23   6.9  

>AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.
          Length = 458

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 7/61 (11%)
 Frame = +1

Query: 58  EAFEALKRSQSMDVGQTWXCVCTETVN-------RSPQVARVLAPGDFPEESSEVCFDRK 216
           E F+AL+++    +G  +  VC  T++       + P    V +   F E    VC D  
Sbjct: 337 ECFDALRKADIYAIGLIFWEVCRRTISCGIAEEYKVPYFDYVSSDPSFEEMRKVVCVDNY 396

Query: 217 R 219
           R
Sbjct: 397 R 397


>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -3

Query: 482 ADGAAIMRYQVRNILRSGRHTLDFTQLVLS 393
           AD AA +RY   +  +  RH L + Q ++S
Sbjct: 483 ADTAAELRYAKEHADKENRHFLQYAQDLIS 512


>AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine
           dehydrogenase protein.
          Length = 1325

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
 Frame = +1

Query: 478 SATQTHLSK--SRFHPVRHRNYEDYGTSSSLSLGTCV*SREAVTWGVWAPSCPARDIPAP 651
           + T   +SK  +R HPV+ R  + +G+         V S  ++      PS    ++  P
Sbjct: 72  AVTTVEVSKYSTRLHPVQERIAKAHGSQCGFCTPGIVMSMYSLLRSSPVPSMKELEVAFP 131

Query: 652 STLC 663
             LC
Sbjct: 132 RNLC 135


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 806,649
Number of Sequences: 2352
Number of extensions: 18569
Number of successful extensions: 86
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 86
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69831885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)