Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20588
(699 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF160896-1|AAD46836.2| 337|Drosophila melanogaster GM14618p pro... 156 3e-38
AE014134-863|AAS64639.1| 338|Drosophila melanogaster CG9124-PB,... 156 3e-38
AE014134-862|AAF52210.3| 338|Drosophila melanogaster CG9124-PA,... 156 3e-38
AY118972-1|AAM50832.1| 280|Drosophila melanogaster LD47792p pro... 40 0.002
AE014297-137|AAF52101.1| 280|Drosophila melanogaster CG9769-PA ... 40 0.002
AE013599-160|AAF57273.2| 286|Drosophila melanogaster CG8335-PA ... 34 0.21
AJ000387-2|CAA04049.1| 343|Drosophila melanogaster Gag protein ... 29 6.1
AY940435-1|AAX38184.1| 141|Drosophila melanogaster glycoprotein... 29 8.0
>AF160896-1|AAD46836.2| 337|Drosophila melanogaster GM14618p
protein.
Length = 337
Score = 156 bits (378), Expect = 3e-38
Identities = 69/84 (82%), Positives = 78/84 (92%)
Frame = +2
Query: 257 HFHVGWYQSADVGNFLSLSLLESQYHYQTSIEESVVVIYDTKKSARGFLTLKAYRLTPQA 436
H HVGWYQS+DVGN LS++LLESQYHYQTSIEESVVV+YDT+KS+RGFL LKAYRLTPQA
Sbjct: 94 HLHVGWYQSSDVGNSLSMALLESQYHYQTSIEESVVVVYDTQKSSRGFLCLKAYRLTPQA 153
Query: 437 IAMYKEGDYTPEALRNLKIGYENL 508
I MYK+GD+TPEA R LK+GYENL
Sbjct: 154 IQMYKDGDFTPEAFRTLKVGYENL 177
Score = 132 bits (318), Expect = 6e-31
Identities = 64/84 (76%), Positives = 73/84 (86%), Gaps = 1/84 (1%)
Frame = +3
Query: 6 RAPENEATIQYVQCDGLAVMKIVKHCHEESCSNMEVAQGALLGLVVENRLEITNCFPFPK 185
R +++ TI YVQCDGLAVMK+VKHCHEES SNM++AQGALLGLVV+ LEITNCFPFPK
Sbjct: 10 RTEDSDNTINYVQCDGLAVMKMVKHCHEES-SNMDLAQGALLGLVVDKCLEITNCFPFPK 68
Query: 186 H-DDTMDEEEYQLDMMRRLRRVNV 254
D+TMDEE YQL +MRRLRRVNV
Sbjct: 69 SGDETMDEEMYQLTVMRRLRRVNV 92
Score = 99 bits (238), Expect = 3e-21
Identities = 44/62 (70%), Positives = 57/62 (91%)
Frame = +1
Query: 514 EVPIVIRNSPLTNIMISELTEMIPEEEGSKFLDLGTASVLEGQLRSLMERVDELNQEAIK 693
E+PIVI+NSPLTNIM+SEL E++PE++G FLDLGTA+VLE Q+RSL+ERVDEL QEA++
Sbjct: 180 EIPIVIKNSPLTNIMMSELNELLPEDKGHNFLDLGTATVLENQMRSLIERVDELYQEAVR 239
Query: 694 FN 699
+N
Sbjct: 240 YN 241
>AE014134-863|AAS64639.1| 338|Drosophila melanogaster CG9124-PB,
isoform B protein.
Length = 338
Score = 156 bits (378), Expect = 3e-38
Identities = 69/84 (82%), Positives = 78/84 (92%)
Frame = +2
Query: 257 HFHVGWYQSADVGNFLSLSLLESQYHYQTSIEESVVVIYDTKKSARGFLTLKAYRLTPQA 436
H HVGWYQS+DVGN LS++LLESQYHYQTSIEESVVV+YDT+KS+RGFL LKAYRLTPQA
Sbjct: 95 HLHVGWYQSSDVGNSLSMALLESQYHYQTSIEESVVVVYDTQKSSRGFLCLKAYRLTPQA 154
Query: 437 IAMYKEGDYTPEALRNLKIGYENL 508
I MYK+GD+TPEA R LK+GYENL
Sbjct: 155 IQMYKDGDFTPEAFRTLKVGYENL 178
Score = 132 bits (318), Expect = 6e-31
Identities = 64/84 (76%), Positives = 73/84 (86%), Gaps = 1/84 (1%)
Frame = +3
Query: 6 RAPENEATIQYVQCDGLAVMKIVKHCHEESCSNMEVAQGALLGLVVENRLEITNCFPFPK 185
R +++ TI YVQCDGLAVMK+VKHCHEES SNM++AQGALLGLVV+ LEITNCFPFPK
Sbjct: 11 RTEDSDNTINYVQCDGLAVMKMVKHCHEES-SNMDLAQGALLGLVVDKCLEITNCFPFPK 69
Query: 186 H-DDTMDEEEYQLDMMRRLRRVNV 254
D+TMDEE YQL +MRRLRRVNV
Sbjct: 70 SGDETMDEEMYQLTVMRRLRRVNV 93
Score = 99 bits (238), Expect = 3e-21
Identities = 44/62 (70%), Positives = 57/62 (91%)
Frame = +1
Query: 514 EVPIVIRNSPLTNIMISELTEMIPEEEGSKFLDLGTASVLEGQLRSLMERVDELNQEAIK 693
E+PIVI+NSPLTNIM+SEL E++PE++G FLDLGTA+VLE Q+RSL+ERVDEL QEA++
Sbjct: 181 EIPIVIKNSPLTNIMMSELNELLPEDKGHNFLDLGTATVLENQMRSLIERVDELYQEAVR 240
Query: 694 FN 699
+N
Sbjct: 241 YN 242
>AE014134-862|AAF52210.3| 338|Drosophila melanogaster CG9124-PA,
isoform A protein.
Length = 338
Score = 156 bits (378), Expect = 3e-38
Identities = 69/84 (82%), Positives = 78/84 (92%)
Frame = +2
Query: 257 HFHVGWYQSADVGNFLSLSLLESQYHYQTSIEESVVVIYDTKKSARGFLTLKAYRLTPQA 436
H HVGWYQS+DVGN LS++LLESQYHYQTSIEESVVV+YDT+KS+RGFL LKAYRLTPQA
Sbjct: 95 HLHVGWYQSSDVGNSLSMALLESQYHYQTSIEESVVVVYDTQKSSRGFLCLKAYRLTPQA 154
Query: 437 IAMYKEGDYTPEALRNLKIGYENL 508
I MYK+GD+TPEA R LK+GYENL
Sbjct: 155 IQMYKDGDFTPEAFRTLKVGYENL 178
Score = 132 bits (318), Expect = 6e-31
Identities = 64/84 (76%), Positives = 73/84 (86%), Gaps = 1/84 (1%)
Frame = +3
Query: 6 RAPENEATIQYVQCDGLAVMKIVKHCHEESCSNMEVAQGALLGLVVENRLEITNCFPFPK 185
R +++ TI YVQCDGLAVMK+VKHCHEES SNM++AQGALLGLVV+ LEITNCFPFPK
Sbjct: 11 RTEDSDNTINYVQCDGLAVMKMVKHCHEES-SNMDLAQGALLGLVVDKCLEITNCFPFPK 69
Query: 186 H-DDTMDEEEYQLDMMRRLRRVNV 254
D+TMDEE YQL +MRRLRRVNV
Sbjct: 70 SGDETMDEEMYQLTVMRRLRRVNV 93
Score = 99 bits (238), Expect = 3e-21
Identities = 44/62 (70%), Positives = 57/62 (91%)
Frame = +1
Query: 514 EVPIVIRNSPLTNIMISELTEMIPEEEGSKFLDLGTASVLEGQLRSLMERVDELNQEAIK 693
E+PIVI+NSPLTNIM+SEL E++PE++G FLDLGTA+VLE Q+RSL+ERVDEL QEA++
Sbjct: 181 EIPIVIKNSPLTNIMMSELNELLPEDKGHNFLDLGTATVLENQMRSLIERVDELYQEAVR 240
Query: 694 FN 699
+N
Sbjct: 241 YN 242
>AY118972-1|AAM50832.1| 280|Drosophila melanogaster LD47792p
protein.
Length = 280
Score = 40.3 bits (90), Expect = 0.002
Identities = 22/47 (46%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Frame = +3
Query: 120 GALLGLVVENRLEITNCF--PFPKHDDTMDEE-EYQLDMMRRLRRVN 251
G LLG V + +E+TNCF P +HDD ++ E Y LDM R+VN
Sbjct: 34 GTLLGSVDKGVVEVTNCFCVPHKEHDDQVEAELSYALDMYDLNRKVN 80
>AE014297-137|AAF52101.1| 280|Drosophila melanogaster CG9769-PA
protein.
Length = 280
Score = 40.3 bits (90), Expect = 0.002
Identities = 22/47 (46%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Frame = +3
Query: 120 GALLGLVVENRLEITNCF--PFPKHDDTMDEE-EYQLDMMRRLRRVN 251
G LLG V + +E+TNCF P +HDD ++ E Y LDM R+VN
Sbjct: 34 GTLLGSVDKGVVEVTNCFCVPHKEHDDQVEAELSYALDMYDLNRKVN 80
>AE013599-160|AAF57273.2| 286|Drosophila melanogaster CG8335-PA
protein.
Length = 286
Score = 33.9 bits (74), Expect = 0.21
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = +3
Query: 120 GALLGLVVENRLEITNCFPFPKHDDTMDEEEYQLDMMRRLRRVNVIIFMLDGTRV 284
G LLG E +EITNCF P H + + + LDM + + +F RV
Sbjct: 38 GTLLGRNKEGHIEITNCFTVP-HKEHSENKRIDLDMAYASEVLELNMFAYPNERV 91
>AJ000387-2|CAA04049.1| 343|Drosophila melanogaster Gag protein
protein.
Length = 343
Score = 29.1 bits (62), Expect = 6.1
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +2
Query: 335 YQTSIEESVVVIYDTKKSARGFLTLKAYR 421
Y TS+EE +++I T ++ G LTL+A R
Sbjct: 105 YITSVEEIIMLIRGTDQTPYGLLTLRAIR 133
>AY940435-1|AAX38184.1| 141|Drosophila melanogaster glycoprotein
hormone alpha 2 protein.
Length = 141
Score = 28.7 bits (61), Expect = 8.0
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 10/55 (18%)
Frame = +1
Query: 283 CR--CRQFSKPFVIRVTISLSDLY*--------GECCCDLRYKEISQRILDFEGL 417
CR C FS P + + SLS L+ G+CC ++ +EI +R+L EG+
Sbjct: 68 CRGFCESFSVPSIPMMGSSLSVLFKPPKPVVSVGQCCNMMKSEEIQRRVLCIEGI 122
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,856,644
Number of Sequences: 53049
Number of extensions: 795161
Number of successful extensions: 2634
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2515
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2628
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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