Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20583
(698 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|ch... 132 6e-32
SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces pomb... 74 2e-14
SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces... 73 4e-14
SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr 3|||Ma... 67 2e-12
SPAC926.03 |rlc1||myosin II regulatory light chain |Schizosaccha... 58 2e-09
SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyce... 52 8e-08
SPAC1687.14c |||EF hand family protein, unknown role|Schizosacch... 44 2e-05
SPBC11G11.02c |end3||actin cortical patch component End3 |Schizo... 36 0.007
SPBC1778.06c |fim1||fimbrin|Schizosaccharomyces pombe|chr 2|||Ma... 35 0.013
SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces ... 31 0.16
SPAC18B11.04 |ncs1||related to neuronal calcium sensor Ncs1|Schi... 31 0.21
SPAC23C4.19 |spt5||transcription elongation factor Spt5|Schizosa... 30 0.28
SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces p... 29 0.48
SPCC1183.11 ||SPCC31H12.01|MS ion channel protein 1|Schizosaccha... 28 1.1
SPCC663.05c |cia1||histone chaperone Cia1|Schizosaccharomyces po... 27 2.6
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 27 3.4
SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor, ... 27 3.4
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 27 3.4
SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1 |Sc... 26 6.0
SPBC530.06c |||translation initiation factor eIF3 alpha subunit ... 26 6.0
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 25 7.9
>SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 150
Score = 132 bits (318), Expect = 6e-32
Identities = 62/74 (83%), Positives = 68/74 (91%)
Frame = +2
Query: 35 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 214
LT+EQIAEF+EAFSLFD+D DG IT+ ELG VMRSLGQ+PT AELQDMINEVDADGNGTI
Sbjct: 6 LTDEQIAEFREAFSLFDRDQDGNITSNELGVVMRSLGQSPTAAELQDMINEVDADGNGTI 65
Query: 215 DFPEFLTMMARKMR 256
DF EFLTMMARKM+
Sbjct: 66 DFTEFLTMMARKMK 79
Score = 111 bits (266), Expect = 1e-25
Identities = 48/72 (66%), Positives = 63/72 (87%)
Frame = +1
Query: 253 EDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 432
+DTD+EEE+REAF+VFDKDGNG+I+ EL HV+T+LGE+L+ EEV +MIREAD DGDG +
Sbjct: 79 KDTDNEEEVREAFKVFDKDGNGYITVEELTHVLTSLGERLSQEEVADMIREADTDGDGVI 138
Query: 433 NYEEFVTMMTSK 468
NYEEF +++SK
Sbjct: 139 NYEEFSRVISSK 150
Score = 70.1 bits (164), Expect = 3e-13
Identities = 34/76 (44%), Positives = 51/76 (67%)
Frame = +2
Query: 23 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 202
M D EE++ +EAF +FDKDG+G IT +EL V+ SLG+ ++ E+ DMI E D DG
Sbjct: 78 MKDTDNEEEV---REAFKVFDKDGNGYITVEELTHVLTSLGERLSQEEVADMIREADTDG 134
Query: 203 NGTIDFPEFLTMMARK 250
+G I++ EF +++ K
Sbjct: 135 DGVINYEEFSRVISSK 150
Score = 67.7 bits (158), Expect = 1e-12
Identities = 33/71 (46%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Frame = +1
Query: 259 TDSE-EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 435
TD + E REAF +FD+D +G I++ EL VM +LG+ T E+ +MI E D DG+G ++
Sbjct: 7 TDEQIAEFREAFSLFDRDQDGNITSNELGVVMRSLGQSPTAAELQDMINEVDADGNGTID 66
Query: 436 YEEFVTMMTSK 468
+ EF+TMM K
Sbjct: 67 FTEFLTMMARK 77
>SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 141
Score = 74.1 bits (174), Expect = 2e-14
Identities = 36/83 (43%), Positives = 55/83 (66%)
Frame = +1
Query: 211 DRLSRVLDNDGAQDEDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 390
++ +VL+ D D EE ++ F+VFDKD G I ELR+V+T+LGEKL++EE+D
Sbjct: 58 EQFLQVLNRPNGFDMPGDPEEFVK-GFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMD 116
Query: 391 EMIREADIDGDGQVNYEEFVTMM 459
E+++ + DG VNY +FV M+
Sbjct: 117 ELLKGVPVK-DGMVNYHDFVQMI 138
Score = 51.2 bits (117), Expect = 1e-07
Identities = 25/63 (39%), Positives = 39/63 (61%)
Frame = +2
Query: 59 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM 238
+K+AFSLFD+ G G I +G ++R+ GQNPT AE I E+++ +D +FL +
Sbjct: 8 YKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAE----ITEIESTLPAEVDMEQFLQV 63
Query: 239 MAR 247
+ R
Sbjct: 64 LNR 66
Score = 41.9 bits (94), Expect = 8e-05
Identities = 20/62 (32%), Positives = 36/62 (58%)
Frame = +2
Query: 56 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 235
EF + F +FDKD G I EL V+ SLG+ + E+ +++ V +G +++ +F+
Sbjct: 78 EFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPVK-DGMVNYHDFVQ 136
Query: 236 MM 241
M+
Sbjct: 137 MI 138
Score = 26.6 bits (56), Expect = 3.4
Identities = 15/60 (25%), Positives = 33/60 (55%)
Frame = +1
Query: 280 REAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMM 459
++AF +FD+ G G I + ++ G+ T E+ E+ E+ + +V+ E+F+ ++
Sbjct: 9 KQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEI--ESTL--PAEVDMEQFLQVL 64
>SPAC29A4.05 |cam2||myosin I light chain Cam2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 143
Score = 72.9 bits (171), Expect = 4e-14
Identities = 34/71 (47%), Positives = 47/71 (66%)
Frame = +1
Query: 256 DTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 435
+T+SEEE +AFRVFDKD +G+I A+ M LGEKL+D EV M++EAD G +
Sbjct: 73 ETESEEEYIKAFRVFDKDNSGYIETAKFADYMKTLGEKLSDNEVQLMVQEADPTNSGSFD 132
Query: 436 YEEFVTMMTSK 468
Y +FV + +K
Sbjct: 133 YYDFVQRIMAK 143
Score = 60.9 bits (141), Expect = 2e-10
Identities = 32/73 (43%), Positives = 47/73 (64%)
Frame = +2
Query: 38 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 217
++EQ E KEAF L+D D DG I T +G+V+RSLG N T+AEL + NE+ ID
Sbjct: 4 SKEQTDEMKEAFVLYDIDKDGLIPTSHVGSVLRSLGINVTDAELAKLSNEL----GDAID 59
Query: 218 FPEFLTMMARKMR 256
+F++ ++ K+R
Sbjct: 60 EKKFMSFVSNKLR 72
Score = 52.4 bits (120), Expect = 6e-08
Identities = 26/79 (32%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Frame = +2
Query: 17 STMADQLTE-EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVD 193
S ++++L E E E+ +AF +FDKD G I T + M++LG+ ++ E+Q M+ E D
Sbjct: 65 SFVSNKLRETESEEEYIKAFRVFDKDNSGYIETAKFADYMKTLGEKLSDNEVQLMVQEAD 124
Query: 194 ADGNGTIDFPEFLTMMARK 250
+G+ D+ +F+ + K
Sbjct: 125 PTNSGSFDYYDFVQRIMAK 143
Score = 37.5 bits (83), Expect = 0.002
Identities = 23/75 (30%), Positives = 45/75 (60%)
Frame = +1
Query: 244 AQDEDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGD 423
A E TD E++EAF ++D D +G I + + V+ +LG +TD E+ ++ E GD
Sbjct: 3 ASKEQTD---EMKEAFVLYDIDKDGLIPTSHVGSVLRSLGINVTDAELAKLSNEL---GD 56
Query: 424 GQVNYEEFVTMMTSK 468
++ ++F++ +++K
Sbjct: 57 A-IDEKKFMSFVSNK 70
>SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 176
Score = 67.3 bits (157), Expect = 2e-12
Identities = 30/68 (44%), Positives = 43/68 (63%)
Frame = +1
Query: 256 DTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 435
+ D EEI+ AF +FD D G IS LR V L E + D+E++ MI E D+D DG++N
Sbjct: 105 ERDPLEEIKRAFELFDDDETGKISLRNLRRVAKELNENIDDQELEAMIEEFDLDQDGEIN 164
Query: 436 YEEFVTMM 459
+EF+ +M
Sbjct: 165 EQEFIAIM 172
Score = 59.3 bits (137), Expect = 5e-10
Identities = 28/77 (36%), Positives = 43/77 (55%)
Frame = +2
Query: 32 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 211
++TEEQ + EAF LFD D D I EL MR+LG N ++E+ ++ + D G G
Sbjct: 30 EITEEQRQDINEAFKLFDSDKDNAIDYHELRAAMRALGFNAEKSEVLKILRDFDKTGKGY 89
Query: 212 IDFPEFLTMMARKMRTR 262
+ +F+ +M K+ R
Sbjct: 90 LQMEDFVRVMTEKIVER 106
Score = 52.0 bits (119), Expect = 8e-08
Identities = 26/69 (37%), Positives = 39/69 (56%)
Frame = +1
Query: 262 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 441
+ ++I EAF++FD D + I ELR M LG EV +++R+ D G G + E
Sbjct: 34 EQRQDINEAFKLFDSDKDNAIDYHELRAAMRALGFNAEKSEVLKILRDFDKTGKGYLQME 93
Query: 442 EFVTMMTSK 468
+FV +MT K
Sbjct: 94 DFVRVMTEK 102
>SPAC926.03 |rlc1||myosin II regulatory light chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 184
Score = 57.6 bits (133), Expect = 2e-09
Identities = 35/79 (44%), Positives = 46/79 (58%)
Frame = +2
Query: 32 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 211
QLT QI E KEAF+L DKDGDG I +++ T++ SL Q+ +E D IN + N
Sbjct: 41 QLTSSQIQELKEAFALLDKDGDGNIGREDVKTMLTSLNQDASE----DSINHMFESINPP 96
Query: 212 IDFPEFLTMMARKMRTRIA 268
I+ FLT M M RI+
Sbjct: 97 INLAAFLTAMG-SMLCRIS 114
Score = 41.5 bits (93), Expect = 1e-04
Identities = 22/78 (28%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Frame = +1
Query: 235 NDGAQDEDTDSE-EEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREAD 411
+ GA + T S+ +E++EAF + DKDG+G I +++ ++T+L + +++ ++ M
Sbjct: 35 SSGAFAQLTSSQIQELKEAFALLDKDGDGNIGREDVKTMLTSLNQDASEDSINHMFESI- 93
Query: 412 IDGDGQVNYEEFVTMMTS 465
+ +N F+T M S
Sbjct: 94 ---NPPINLAAFLTAMGS 108
Score = 36.7 bits (81), Expect = 0.003
Identities = 17/59 (28%), Positives = 34/59 (57%)
Frame = +1
Query: 274 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 450
++ EAF FD +G I + +R ++++G+++ +EV+ ++R G YE+FV
Sbjct: 118 DLLEAFSTFDDTQSGKIPISTMRDALSSMGDRMDPQEVESILR--SYTSHGVFYYEKFV 174
Score = 25.8 bits (54), Expect = 6.0
Identities = 12/46 (26%), Positives = 20/46 (43%)
Frame = +2
Query: 65 EAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 202
EAFS FD G I + + S+G E++ ++ + G
Sbjct: 121 EAFSTFDDTQSGKIPISTMRDALSSMGDRMDPQEVESILRSYTSHG 166
>SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 174
Score = 52.0 bits (119), Expect = 8e-08
Identities = 27/67 (40%), Positives = 43/67 (64%), Gaps = 5/67 (7%)
Frame = +1
Query: 262 DSEEEIREAFRVFDKDGNGFISAAELRHVM-----TNLGEKLTDEEVDEMIREADIDGDG 426
+ EE+++ AF+++D D +G+IS EL V+ TNL E + VD+ I E D D DG
Sbjct: 90 NKEEKLKFAFKIYDIDRDGYISNGELYLVLKMMVGTNLREDQLQQIVDKTIMEVDKDRDG 149
Query: 427 QVNYEEF 447
++++EEF
Sbjct: 150 KISFEEF 156
Score = 36.3 bits (80), Expect = 0.004
Identities = 20/69 (28%), Positives = 35/69 (50%)
Frame = +2
Query: 38 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 217
+ E+I ++ F D + G+I E ++ S+ NP + L + VD DG G +D
Sbjct: 19 SNEEIERIRKRFIKIDANQSGSIDRNEFLSIP-SVASNPLASRL---FSVVDEDGGGDVD 74
Query: 218 FPEFLTMMA 244
F EF+ ++
Sbjct: 75 FQEFINSLS 83
>SPAC1687.14c |||EF hand family protein, unknown
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 76
Score = 44.4 bits (100), Expect = 2e-05
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Frame = +1
Query: 262 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDG-DGQVNY 438
+ +EE EAF +FD G+I +LR LGE LT E++ M+ D+ G +G+V+
Sbjct: 9 EMDEEAEEAFDLFDVTHKGYIDFEDLRRSCAQLGENLTKEQLQLML---DLAGTNGKVSR 65
Query: 439 EEFVTM 456
EEF +
Sbjct: 66 EEFAEL 71
Score = 34.7 bits (76), Expect = 0.013
Identities = 23/62 (37%), Positives = 32/62 (51%)
Frame = +2
Query: 44 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 223
E E +EAF LFD G I ++L LG+N T+ +LQ M++ A NG +
Sbjct: 9 EMDEEAEEAFDLFDVTHKGYIDFEDLRRSCAQLGENLTKEQLQLMLDL--AGTNGKVSRE 66
Query: 224 EF 229
EF
Sbjct: 67 EF 68
>SPBC11G11.02c |end3||actin cortical patch component End3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 375
Score = 35.5 bits (78), Expect = 0.007
Identities = 19/68 (27%), Positives = 39/68 (57%)
Frame = +1
Query: 256 DTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 435
D + + E FR + + NG++S ++ V+ + KL+ ++++++ ADID DG +
Sbjct: 2 DPQEKNKYWEIFRGLNPE-NGYLSGSKAAGVLRS--SKLSSDKLEKIWDLADIDDDGMFD 58
Query: 436 YEEFVTMM 459
++EF M
Sbjct: 59 FDEFAIAM 66
>SPBC1778.06c |fim1||fimbrin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 614
Score = 34.7 bits (76), Expect = 0.013
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +1
Query: 277 IREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 450
+ + F D DG G++ + +K + +EV E IRE ++D G+V E+FV
Sbjct: 21 LTDQFNKLDVDGKGYLDQPTTIKAFED-SKKGSYDEVREAIREVNVDSSGRVEPEDFV 77
>SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 557
Score = 31.1 bits (67), Expect = 0.16
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = -3
Query: 423 VAVDIGLANHLVDLLVSEFLSEVGHDVAQLGRGDEAVAVLVEDAE 289
V++ I L ++ L+ FLSE + +G+ DEA+ V+ ++AE
Sbjct: 180 VSIGINLLWGIITLVGVSFLSESPRYLVSIGKDDEAIQVMCKNAE 224
>SPAC18B11.04 |ncs1||related to neuronal calcium sensor
Ncs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 190
Score = 30.7 bits (66), Expect = 0.21
Identities = 14/57 (24%), Positives = 30/57 (52%)
Frame = +1
Query: 289 FRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMM 459
F VFD D NG+I E ++ ++++ + D+D +G ++Y+E + ++
Sbjct: 69 FNVFDADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIV 125
Score = 28.7 bits (61), Expect = 0.85
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 12/66 (18%)
Frame = +1
Query: 286 AFRVFDKDGNGFISAAELRHVMTNLGE------KLTDEE------VDEMIREADIDGDGQ 429
AF+++D D NG IS E+ ++ + + KL ++E V+++ D + DGQ
Sbjct: 104 AFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQ 163
Query: 430 VNYEEF 447
+ EEF
Sbjct: 164 LTLEEF 169
Score = 27.5 bits (58), Expect = 2.0
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 176 MINEVDADGNGTIDFPEFLTMMARKMRTRIARK 274
+ N DAD NG IDF EF+ ++ R + K
Sbjct: 68 VFNVFDADKNGYIDFKEFICALSVTSRGELNDK 100
>SPAC23C4.19 |spt5||transcription elongation factor
Spt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 990
Score = 30.3 bits (65), Expect = 0.28
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Frame = +1
Query: 190 RRGRKRHDRLSRVLDNDGAQDED----TDSEEEI-REAFRVFDKDGNGFISAAELRHVMT 354
RR R RHDR ++ LD + DED D E+EI RE + ++ G ++ +
Sbjct: 134 RRKRARHDRRNQFLDIEAEVDEDEEELEDEEDEIGREDGFIEEEVGADYVGDDRRHRELD 193
Query: 355 NLGEKLTDEEVDEMIRE 405
++L + + + E
Sbjct: 194 RQRQELQSVDAERLAEE 210
>SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 531
Score = 29.5 bits (63), Expect = 0.48
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = -3
Query: 423 VAVDIGLANHLVDLLVSEFLSEVGHDVAQLGRGDEAVAVLVEDAEGLAD 277
V++ I L ++ ++ FL E + Q+G+ +EAV VL E AE D
Sbjct: 184 VSIGINLLWGIITMIGILFLPESPRYLIQVGKDEEAVRVLSESAELFPD 232
>SPCC1183.11 ||SPCC31H12.01|MS ion channel protein
1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1011
Score = 28.3 bits (60), Expect = 1.1
Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = +2
Query: 29 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG--QNPTEAELQDMINEV 190
D+ E A + +S+FD+D +G IT +E+ +G + A L+D+ + +
Sbjct: 538 DETGEVDNATLEACYSIFDRDLNGDITCEEIELACVEIGKERKSISASLRDLNDSI 593
>SPCC663.05c |cia1||histone chaperone Cia1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 27.1 bits (57), Expect = 2.6
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 346 VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 444
V + E+ +EE DEM E D +G+G EE
Sbjct: 170 VQPDADEEEEEEEADEMEEEFDEEGEGDEEEEE 202
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 26.6 bits (56), Expect = 3.4
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 8/46 (17%)
Frame = +1
Query: 298 FDKDGNGFISAAELRH--------VMTNLGEKLTDEEVDEMIREAD 411
FD D NG ++ + L +TN +L+ EE+D M+ EA+
Sbjct: 476 FDVDANGILNVSALEKGTGKTQKITITNDKGRLSKEEIDRMVSEAE 521
>SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor,
zf-fungal binuclear cluster type |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 977
Score = 26.6 bits (56), Expect = 3.4
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = -1
Query: 173 LEVRLLWGSVLATSSRCPALWS*WCHR 93
LE++ WGS+ A + +W+ W R
Sbjct: 850 LEMKNYWGSISALCDKMSEIWADWVQR 876
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 26.6 bits (56), Expect = 3.4
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 8/46 (17%)
Frame = +1
Query: 298 FDKDGNGFISAAELRH--------VMTNLGEKLTDEEVDEMIREAD 411
FD D NG ++ + L +TN +L+ EE+D M+ EA+
Sbjct: 476 FDVDANGILNVSALEKGTGKTQKITITNDKGRLSKEEIDRMVAEAE 521
>SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1233
Score = 25.8 bits (54), Expect = 6.0
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +1
Query: 208 HDRLSRVLDNDGAQDEDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 381
+D L L NDG++ + +E++RE D+ + L V T L KL +E
Sbjct: 988 YDELDEELRNDGSESMASVLQEKLREYSEELDQMSPNLRAIERLETVETRLA-KLDEE 1044
>SPBC530.06c |||translation initiation factor eIF3 alpha subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1173
Score = 25.8 bits (54), Expect = 6.0
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -3
Query: 435 IDLAVAVDIGLANHLVDLLVSEFLSEVGHDVAQL 334
+D++V +D+ +H L S LS HDV Q+
Sbjct: 28 VDVSVDIDVIFPDHTQTLSFSLLLSNTIHDVRQV 61
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 25.4 bits (53), Expect = 7.9
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2
Query: 65 EAFSLFDKDGDGTITTKELGTVMR 136
+ F FD+D DG + +EL + R
Sbjct: 311 DLFYQFDRDNDGALNNEELSALFR 334
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,078,981
Number of Sequences: 5004
Number of extensions: 36103
Number of successful extensions: 174
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 165
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 323158234
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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