Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20582
         (703 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X15109-1|CAA33207.1|  239|Drosophila melanogaster ribosomal  pro...    91   2e-18
AY089648-1|AAL90386.1|  252|Drosophila melanogaster RH04903p pro...    91   2e-18
AE014134-1774|AAF52868.1|  252|Drosophila melanogaster CG4897-PA...    91   2e-18
BT029578-1|ABL75637.1|  257|Drosophila melanogaster IP16905p pro...    70   4e-12
BT029555-1|ABL75615.1|  257|Drosophila melanogaster IP16805p pro...    70   4e-12
BT021218-1|AAX33366.1|  257|Drosophila melanogaster RH63749p pro...    70   4e-12
AY071314-1|AAL48936.1|  257|Drosophila melanogaster RE33833p pro...    70   4e-12
AE014134-2146|AAF53155.2|  257|Drosophila melanogaster CG5317-PA...    70   4e-12
BT028802-1|ABI34183.1|  227|Drosophila melanogaster LP23547p pro...    45   9e-05
AE013599-815|AAF58971.2| 2408|Drosophila melanogaster CG8014-PA ...    29   4.6  

>X15109-1|CAA33207.1|  239|Drosophila melanogaster ribosomal
           protein protein.
          Length = 239

 Score = 90.6 bits (215), Expect = 2e-18
 Identities = 39/58 (67%), Positives = 48/58 (82%), Gaps = 1/58 (1%)
 Frame = +2

Query: 509 IAWGYPNLKSVRELVYKRGFAKLSGQRIPITSNSIVEKRLHK-HNIICVEDLIHEIFT 679
           I WGYPNLKSVREL+YKRGF K + QR+PIT N ++E++L + H I CVEDL+HEIFT
Sbjct: 130 ITWGYPNLKSVRELIYKRGFVKHNRQRVPITDNFVIERKLRQAHQIQCVEDLVHEIFT 187



 Score = 68.9 bits (161), Expect = 6e-12
 Identities = 31/35 (88%), Positives = 35/35 (100%)
 Frame = +3

Query: 402 EVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEP 506
           +VRKVLQLFRLRQINNGVF++LNKAT+NMLRIAEP
Sbjct: 94  KVRKVLQLFRLRQINNGVFIKLNKATINMLRIAEP 128



 Score = 62.9 bits (146), Expect = 4e-10
 Identities = 29/48 (60%), Positives = 36/48 (75%)
 Frame = +1

Query: 262 YVKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPK 405
           Y  EY   E+ EI+L R A+ R  +YVP EAKLAFV+RIRGIN+V+PK
Sbjct: 47  YQNEYIKAEQREIKLRRLAKKRNQFYVPAEAKLAFVVRIRGINKVAPK 94


>AY089648-1|AAL90386.1|  252|Drosophila melanogaster RH04903p
           protein.
          Length = 252

 Score = 90.6 bits (215), Expect = 2e-18
 Identities = 39/58 (67%), Positives = 48/58 (82%), Gaps = 1/58 (1%)
 Frame = +2

Query: 509 IAWGYPNLKSVRELVYKRGFAKLSGQRIPITSNSIVEKRLHK-HNIICVEDLIHEIFT 679
           I WGYPNLKSVREL+YKRGF K + QR+PIT N ++E++L + H I CVEDL+HEIFT
Sbjct: 143 ITWGYPNLKSVRELIYKRGFVKHNRQRVPITDNFVIERKLRQAHQIQCVEDLVHEIFT 200



 Score = 68.9 bits (161), Expect = 6e-12
 Identities = 31/35 (88%), Positives = 35/35 (100%)
 Frame = +3

Query: 402 EVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEP 506
           +VRKVLQLFRLRQINNGVF++LNKAT+NMLRIAEP
Sbjct: 107 KVRKVLQLFRLRQINNGVFIKLNKATINMLRIAEP 141



 Score = 62.9 bits (146), Expect = 4e-10
 Identities = 29/48 (60%), Positives = 36/48 (75%)
 Frame = +1

Query: 262 YVKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPK 405
           Y  EY   E+ EI+L R A+ R  +YVP EAKLAFV+RIRGIN+V+PK
Sbjct: 60  YQNEYIKAEQREIKLRRLAKKRNQFYVPAEAKLAFVVRIRGINKVAPK 107



 Score = 29.9 bits (64), Expect = 3.5
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = +2

Query: 95  PVKGKEDSKKLPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKRE 241
           PV  K  +KKLPAVPES LK             +  LK+ +    +K+E
Sbjct: 4   PVVKKPAAKKLPAVPESKLKFSKKQISKRVAESKRRLKKAAVIALRKKE 52


>AE014134-1774|AAF52868.1|  252|Drosophila melanogaster CG4897-PA
           protein.
          Length = 252

 Score = 90.6 bits (215), Expect = 2e-18
 Identities = 39/58 (67%), Positives = 48/58 (82%), Gaps = 1/58 (1%)
 Frame = +2

Query: 509 IAWGYPNLKSVRELVYKRGFAKLSGQRIPITSNSIVEKRLHK-HNIICVEDLIHEIFT 679
           I WGYPNLKSVREL+YKRGF K + QR+PIT N ++E++L + H I CVEDL+HEIFT
Sbjct: 143 ITWGYPNLKSVRELIYKRGFVKHNRQRVPITDNFVIERKLRQAHQIQCVEDLVHEIFT 200



 Score = 68.9 bits (161), Expect = 6e-12
 Identities = 31/35 (88%), Positives = 35/35 (100%)
 Frame = +3

Query: 402 EVRKVLQLFRLRQINNGVFVRLNKATVNMLRIAEP 506
           +VRKVLQLFRLRQINNGVF++LNKAT+NMLRIAEP
Sbjct: 107 KVRKVLQLFRLRQINNGVFIKLNKATINMLRIAEP 141



 Score = 62.9 bits (146), Expect = 4e-10
 Identities = 29/48 (60%), Positives = 36/48 (75%)
 Frame = +1

Query: 262 YVKEYRIKERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPK 405
           Y  EY   E+ EI+L R A+ R  +YVP EAKLAFV+RIRGIN+V+PK
Sbjct: 60  YQNEYIKAEQREIKLRRLAKKRNQFYVPAEAKLAFVVRIRGINKVAPK 107



 Score = 29.9 bits (64), Expect = 3.5
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = +2

Query: 95  PVKGKEDSKKLPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKRE 241
           PV  K  +KKLPAVPES LK             +  LK+ +    +K+E
Sbjct: 4   PVVKKPAAKKLPAVPESKLKFSKKQISKRVAESKRRLKKAAVIALRKKE 52


>BT029578-1|ABL75637.1|  257|Drosophila melanogaster IP16905p
           protein.
          Length = 257

 Score = 69.7 bits (163), Expect = 4e-12
 Identities = 28/57 (49%), Positives = 45/57 (78%)
 Frame = +2

Query: 509 IAWGYPNLKSVRELVYKRGFAKLSGQRIPITSNSIVEKRLHKHNIICVEDLIHEIFT 679
           + +G P+L S+RELV+K+GFA++ G++  I SN++VE++L    +IC+ED+IHEI T
Sbjct: 148 VVYGNPSLSSIRELVFKKGFARIDGKKTAIQSNTMVEQQLGDKGVICLEDIIHEICT 204


>BT029555-1|ABL75615.1|  257|Drosophila melanogaster IP16805p
           protein.
          Length = 257

 Score = 69.7 bits (163), Expect = 4e-12
 Identities = 28/57 (49%), Positives = 45/57 (78%)
 Frame = +2

Query: 509 IAWGYPNLKSVRELVYKRGFAKLSGQRIPITSNSIVEKRLHKHNIICVEDLIHEIFT 679
           + +G P+L S+RELV+K+GFA++ G++  I SN++VE++L    +IC+ED+IHEI T
Sbjct: 148 VVYGNPSLSSIRELVFKKGFARIDGKKTAIQSNTMVEQQLGDKGVICLEDIIHEICT 204


>BT021218-1|AAX33366.1|  257|Drosophila melanogaster RH63749p
           protein.
          Length = 257

 Score = 69.7 bits (163), Expect = 4e-12
 Identities = 28/57 (49%), Positives = 45/57 (78%)
 Frame = +2

Query: 509 IAWGYPNLKSVRELVYKRGFAKLSGQRIPITSNSIVEKRLHKHNIICVEDLIHEIFT 679
           + +G P+L S+RELV+K+GFA++ G++  I SN++VE++L    +IC+ED+IHEI T
Sbjct: 148 VVYGNPSLSSIRELVFKKGFARIDGKKTAIQSNTMVEQQLGDKGVICLEDIIHEICT 204


>AY071314-1|AAL48936.1|  257|Drosophila melanogaster RE33833p
           protein.
          Length = 257

 Score = 69.7 bits (163), Expect = 4e-12
 Identities = 28/57 (49%), Positives = 45/57 (78%)
 Frame = +2

Query: 509 IAWGYPNLKSVRELVYKRGFAKLSGQRIPITSNSIVEKRLHKHNIICVEDLIHEIFT 679
           + +G P+L S+RELV+K+GFA++ G++  I SN++VE++L    +IC+ED+IHEI T
Sbjct: 148 VVYGNPSLSSIRELVFKKGFARIDGKKTAIQSNTMVEQQLGDKGVICLEDIIHEICT 204


>AE014134-2146|AAF53155.2|  257|Drosophila melanogaster CG5317-PA
           protein.
          Length = 257

 Score = 69.7 bits (163), Expect = 4e-12
 Identities = 28/57 (49%), Positives = 45/57 (78%)
 Frame = +2

Query: 509 IAWGYPNLKSVRELVYKRGFAKLSGQRIPITSNSIVEKRLHKHNIICVEDLIHEIFT 679
           + +G P+L S+RELV+K+GFA++ G++  I SN++VE++L    +IC+ED+IHEI T
Sbjct: 148 VVYGNPSLSSIRELVFKKGFARIDGKKTAIQSNTMVEQQLGDKGVICLEDIIHEICT 204


>BT028802-1|ABI34183.1|  227|Drosophila melanogaster LP23547p
           protein.
          Length = 227

 Score = 45.2 bits (102), Expect = 9e-05
 Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
 Frame = -3

Query: 539 HSLSWGI-PKQLRLGDT*HIHSSLIQTYKHTIVYLAQSKQLQNFTDFG 399
           H L  GI P  + LGD  H+   L+Q  +HT+V L Q++QLQN  D G
Sbjct: 44  HGLQIGIAPGDVGLGDAQHVDGGLVQLDEHTVVDLPQTEQLQNLADLG 91



 Score = 32.7 bits (71), Expect = 0.50
 Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = -2

Query: 396 NLVDTTDSDDKCQFGFPGNVVVATIACLSG*SDFITF-LDAVFLDVL 259
           +LVDT D+DDK QFG  G+V +  +   +   D   F LD + L +L
Sbjct: 93  HLVDTADTDDKGQFGLGGHVELVALLGQATQLDLALFRLDVLILVLL 139



 Score = 31.9 bits (69), Expect = 0.87
 Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
 Frame = -1

Query: 667 MDEVLNTDNVVFMEPL-LNNAVGSDWYTLSTQLGESTFVY*LTDTL*VGVSPSN*G 503
           MD++L+  N+V +  L L++ V  D + L+  L EST V  L   L +G++P + G
Sbjct: 1   MDKILDALNLVRLTQLPLDHEVIGDGHALAVMLHESTLVDQLPHGLQIGIAPGDVG 56


>AE013599-815|AAF58971.2| 2408|Drosophila melanogaster CG8014-PA
            protein.
          Length = 2408

 Score = 29.5 bits (63), Expect = 4.6
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = +2

Query: 236  REIFKRVNSTSRNTASRNVMKSD*PDKHAIV 328
            REIF++VN       SRNV  S  PD + IV
Sbjct: 1342 REIFEKVNQAYEFLCSRNVWSSGGPDPNNIV 1372


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,643,820
Number of Sequences: 53049
Number of extensions: 564790
Number of successful extensions: 1249
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1243
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3087795150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)