Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20581
         (676 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70205-10|CAA94122.2|  887|Caenorhabditis elegans Hypothetical p...    29   2.3  
Z68003-5|CAA91979.2|  887|Caenorhabditis elegans Hypothetical pr...    29   2.3  
Z82266-1|CAB05178.2|  626|Caenorhabditis elegans Hypothetical pr...    28   5.3  
Z81077-15|CAN99680.1|  664|Caenorhabditis elegans Hypothetical p...    28   7.0  
Z81077-14|CAN99679.1|  662|Caenorhabditis elegans Hypothetical p...    28   7.0  
Z81077-2|CAD56583.2|  656|Caenorhabditis elegans Hypothetical pr...    28   7.0  
Z81077-1|CAB03066.2|  658|Caenorhabditis elegans Hypothetical pr...    28   7.0  
Z77652-12|CAI70406.1|  310|Caenorhabditis elegans Hypothetical p...    27   9.2  
U41746-4|AAA83332.1|  559|Caenorhabditis elegans Innexin protein...    27   9.2  

>Z70205-10|CAA94122.2|  887|Caenorhabditis elegans Hypothetical
           protein E02H4.3a protein.
          Length = 887

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -2

Query: 240 PKFPPHTAFMTQNPTPYLRESDLPLRNPLENK 145
           P+ PPH   MT NPTP      LPL + +  K
Sbjct: 94  PQIPPHQK-MTPNPTPTQNPVQLPLPHAVSEK 124


>Z68003-5|CAA91979.2|  887|Caenorhabditis elegans Hypothetical
           protein E02H4.3a protein.
          Length = 887

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -2

Query: 240 PKFPPHTAFMTQNPTPYLRESDLPLRNPLENK 145
           P+ PPH   MT NPTP      LPL + +  K
Sbjct: 94  PQIPPHQK-MTPNPTPTQNPVQLPLPHAVSEK 124


>Z82266-1|CAB05178.2|  626|Caenorhabditis elegans Hypothetical
           protein F23B2.3 protein.
          Length = 626

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
 Frame = +2

Query: 437 SAFISILYFSDDWGNCENRYHYSVVN----TTKQCVPI*RVESLLRYC 568
           S F  +L   +DWGNC   Y Y + +    T+  C+ + + +  +  C
Sbjct: 334 SKFRYVLLPPNDWGNCTEDYPYGIQSNLSYTSGNCLSLCKAKYFMNQC 381


>Z81077-15|CAN99680.1|  664|Caenorhabditis elegans Hypothetical
           protein F36A2.1d protein.
          Length = 664

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = -3

Query: 218 PL*PKIQPRISEKVTYHSETHSKISRPVPSVASAPLTEP 102
           PL    QP  S+    ++   SK S P P++ SAPL++P
Sbjct: 373 PLPSTFQPPPSKPAVINA---SKFSMPPPAITSAPLSDP 408


>Z81077-14|CAN99679.1|  662|Caenorhabditis elegans Hypothetical
           protein F36A2.1c protein.
          Length = 662

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = -3

Query: 218 PL*PKIQPRISEKVTYHSETHSKISRPVPSVASAPLTEP 102
           PL    QP  S+    ++   SK S P P++ SAPL++P
Sbjct: 371 PLPSTFQPPPSKPAVINA---SKFSMPPPAITSAPLSDP 406


>Z81077-2|CAD56583.2|  656|Caenorhabditis elegans Hypothetical
           protein F36A2.1b protein.
          Length = 656

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = -3

Query: 218 PL*PKIQPRISEKVTYHSETHSKISRPVPSVASAPLTEP 102
           PL    QP  S+    ++   SK S P P++ SAPL++P
Sbjct: 365 PLPSTFQPPPSKPAVINA---SKFSMPPPAITSAPLSDP 400


>Z81077-1|CAB03066.2|  658|Caenorhabditis elegans Hypothetical
           protein F36A2.1a protein.
          Length = 658

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = -3

Query: 218 PL*PKIQPRISEKVTYHSETHSKISRPVPSVASAPLTEP 102
           PL    QP  S+    ++   SK S P P++ SAPL++P
Sbjct: 367 PLPSTFQPPPSKPAVINA---SKFSMPPPAITSAPLSDP 402


>Z77652-12|CAI70406.1|  310|Caenorhabditis elegans Hypothetical
           protein C06B3.14 protein.
          Length = 310

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 11/42 (26%), Positives = 23/42 (54%)
 Frame = +2

Query: 410 KILVFNVEWSAFISILYFSDDWGNCENRYHYSVVNTTKQCVP 535
           K+ ++ +  + F+ IL+F   +G C + Y +   + T +C P
Sbjct: 124 KLWLYCLGLAMFLLILFFIPFFGGCADNYSFYDFDYTSECDP 165


>U41746-4|AAA83332.1|  559|Caenorhabditis elegans Innexin protein
           10, isoform a protein.
          Length = 559

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = -2

Query: 231 PPHTAFMTQNPTPYLRESDLPLRNPLENKSSCPFSGVSTANRTNTVET 88
           PP+  +  QNPTPY  ++ +  +N   N    P     T +R  +  T
Sbjct: 499 PPY-CYTNQNPTPYQNQNQIQNQNQYSNYYRTPSLSRGTDSRPVSTAT 545


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,967,847
Number of Sequences: 27780
Number of extensions: 318026
Number of successful extensions: 918
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 916
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)