Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20581
         (676 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g03070.1 68417.m00415 2-oxoglutarate-dependent dioxygenase (A...    30   1.2  
At3g23640.1 68416.m02973 glycosyl hydrolase family 31 protein si...    30   1.6  
At1g28600.1 68414.m03522 lipase, putative similar to lipase [Ara...    29   3.8  
At3g04520.1 68416.m00479 threonine aldolase family protein simil...    28   5.0  
At2g41960.1 68415.m05191 expressed protein                             27   8.7  
At2g22600.1 68415.m02679 KH domain-containing protein                  27   8.7  
At1g48280.1 68414.m05393 hydroxyproline-rich glycoprotein family...    27   8.7  

>At4g03070.1 68417.m00415 2-oxoglutarate-dependent dioxygenase
           (AOP1.2) identical to GI:16118887; contains PF03171:
           2OG-Fe(II) oxygenase superfamily domain
          Length = 322

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 15/37 (40%), Positives = 23/37 (62%)
 Frame = +3

Query: 420 CLMLSGVLLSPFYILVMTGVTVRTGTIILS*IPRNSV 530
           C +L+G L SP++ ++MTG   R  T + S IP+  V
Sbjct: 240 CALLNGRLHSPYHRVIMTGKKTRYSTGLFS-IPKTGV 275


>At3g23640.1 68416.m02973 glycosyl hydrolase family 31 protein
           similar to alpha-glucosidase II from SP:Q9F234 [Bacillus
           thermoamyloliquefaciens]; contains Pfam profile: PF01055
           Glycosyl hydrolases family 31
          Length = 991

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 16/35 (45%), Positives = 19/35 (54%)
 Frame = +1

Query: 55  QLVTFPECHNDSFNGIGSVSGADATEGTGRLIFEW 159
           Q+VTF      SF G G VSG    E TG+ +F W
Sbjct: 76  QVVTFEFSPGTSFYGTGEVSG--QLERTGKRVFTW 108


>At1g28600.1 68414.m03522 lipase, putative similar to lipase
           [Arabidopsis thaliana] GI:1145627; contains InterPro
           Entry IPR001087 Lipolytic enzyme, G-D-S-L family
          Length = 393

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 18/49 (36%), Positives = 25/49 (51%)
 Frame = -3

Query: 458 IKWR*KHSTQH*TLIFLKLVRLRKYYDQINYLQADNGTKIHISNARIFK 312
           +KW  K    H   + ++L RLRK Y  +N + AD     + S  RIFK
Sbjct: 248 LKWLNKFGEYHSEKLKVELNRLRKLYPHVNIIYAD----YYNSLLRIFK 292


>At3g04520.1 68416.m00479 threonine aldolase family protein similar
           to L-allo-threonine aldolase SP:O07051 from [Aeromonas
           jandaei]
          Length = 355

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -3

Query: 389 KYYDQINYLQADNGTKIHISNARIF 315
           +Y D++  L   +G K+HI  ARIF
Sbjct: 161 EYIDKVGELAKKHGLKLHIDGARIF 185


>At2g41960.1 68415.m05191 expressed protein 
          Length = 1215

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -1

Query: 298 DY*PCSNSKPVSIQNELTETEIPATYGLYDPKS 200
           DY  CS  KP++   E  E+   AT G+ +PKS
Sbjct: 726 DYHSCS-CKPINGYREKVESNTSATRGMREPKS 757


>At2g22600.1 68415.m02679 KH domain-containing protein 
          Length = 632

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
 Frame = +1

Query: 70  PECHNDSFNGIGS-----VSGADATEGTGRLIFEWVSEW*VTFSEIRG 198
           P    +SFNG G+      +GAD     G  + EW+SE  V   EI+G
Sbjct: 376 PSHFANSFNGNGNREAIIATGADVHISVGNQVLEWISENEVVI-EIKG 422


>At1g48280.1 68414.m05393 hydroxyproline-rich glycoprotein family
           protein
          Length = 558

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = -3

Query: 200 QPRISEKVTYHSETHSKISRPVPSVASAPLTEPIP 96
           QP++ ++V   S   S++S P PS +  P T P+P
Sbjct: 205 QPKVKKEVAVES---SRLSPPSPSPSRLPPTPPLP 236


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,007,616
Number of Sequences: 28952
Number of extensions: 289167
Number of successful extensions: 729
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 729
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1432596384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)