Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20580
(701 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16) 61 1e-09
SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 7e-09
SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38) 57 2e-08
SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36) 55 5e-08
SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 1e-06
SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0) 50 2e-06
SB_35971| Best HMM Match : RRM_1 (HMM E-Value=0.013) 46 4e-05
SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0) 42 5e-04
SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 8e-04
SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15) 41 0.001
SB_6474| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_39934| Best HMM Match : RRM_1 (HMM E-Value=6.5e-24) 39 0.003
SB_13046| Best HMM Match : La (HMM E-Value=5e-23) 39 0.003
SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20) 38 0.008
SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07) 38 0.010
SB_37827| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.010
SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18) 37 0.018
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 36 0.024
SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.032
SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.032
SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18) 36 0.042
SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0) 36 0.042
SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24) 35 0.056
SB_31413| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.056
SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.056
SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0) 35 0.056
SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28) 35 0.073
SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25) 34 0.097
SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.097
SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18) 34 0.13
SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0) 33 0.17
SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.17
SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0) 33 0.17
SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0) 33 0.17
SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.17
SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_47564| Best HMM Match : RRM_1 (HMM E-Value=0.23) 33 0.22
SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15) 33 0.30
SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28) 32 0.52
SB_20581| Best HMM Match : RRM_1 (HMM E-Value=1.7e-07) 32 0.52
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21) 30 1.6
SB_25463| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_15594| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_46941| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_18026| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11) 29 4.8
SB_46435| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_41060| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_18084| Best HMM Match : DUF801 (HMM E-Value=0.37) 28 6.4
SB_45368| Best HMM Match : fn2 (HMM E-Value=3.1e-32) 28 6.4
SB_7529| Best HMM Match : Toxin_29 (HMM E-Value=0.0017) 28 6.4
SB_1073| Best HMM Match : Ribosomal_L12 (HMM E-Value=2.2) 28 6.4
SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33) 28 8.4
SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35) 28 8.4
SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_20263| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
>SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16)
Length = 842
Score = 60.9 bits (141), Expect = 1e-09
Identities = 31/72 (43%), Positives = 44/72 (61%)
Frame = +3
Query: 270 LRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA 449
LR HF +GE++ V DP T RSRGF F+ FK P+++D V+ +G +++D KK
Sbjct: 124 LRQHFEKFGELKECVVMRDPVTKRSRGFGFLTFKDPKAVDVVLNSGA-----QELDGKKM 178
Query: 450 KARHGKIFVGGL 485
KIF+GGL
Sbjct: 179 VTTTKKIFIGGL 190
Score = 32.3 bits (70), Expect = 0.39
Identities = 15/55 (27%), Positives = 29/55 (52%)
Frame = +2
Query: 509 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEPVVNDLLKTPKRTKGGKEV 673
+R F +FG + E + D + +GF F+TF+ V+ +L + + GK++
Sbjct: 124 LRQHFEKFGELKECVVMRDPVTKRSRGFGFLTFKDPKAVDVVLNSGAQELDGKKM 178
>SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 58.0 bits (134), Expect = 7e-09
Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Frame = +3
Query: 255 TTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKV 434
TT+ E++++F +GEI+ VK DPNT RSRGF F+ FK E V++ H I +
Sbjct: 126 TTESEMKEYFTRFGEIDFCEVKLDPNTRRSRGFGFVRFKKDEDAKNVLST-SHRIQGRLC 184
Query: 435 D-----PKKAKARHGKIFVGGL 485
+ PK+ K+FVG L
Sbjct: 185 EVRLPRPKEELNVPKKLFVGRL 206
Score = 34.7 bits (76), Expect = 0.073
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = +2
Query: 509 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEPVVNDLLKTPKRTKGGKEVDVKRA 688
++ +F+ FG I E+ D + +GF F+ F+ + ++L T R + G+ +V+
Sbjct: 131 MKEYFTRFGEIDFCEVKLDPNTRRSRGFGFVRFKKDEDAKNVLSTSHRIQ-GRLCEVRLP 189
Query: 689 TPK 697
PK
Sbjct: 190 RPK 192
>SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38)
Length = 496
Score = 56.8 bits (131), Expect = 2e-08
Identities = 32/103 (31%), Positives = 60/103 (58%), Gaps = 12/103 (11%)
Frame = +3
Query: 213 EDAMKTFCWWAELGTTDKELRDHFGAYGEI-ESINVKTDPNTGRSRGFAFIVFKAPESID 389
E K F TT++ L+D+F +G I + + +K D GRSRGF F+ +++ +S++
Sbjct: 47 EKLRKIFIGGLNWNTTEEGLKDYFSQWGTIVDCVIMKRD---GRSRGFGFVTYESSDSVN 103
Query: 390 KVMAAGEHTINNKKVDPKK-----------AKARHGKIFVGGL 485
+V+ +H +++++++PK+ A ++ KIFVGGL
Sbjct: 104 EVLKKKDHVLDDREIEPKRSVPRDESGAPEAMSKTRKIFVGGL 146
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/63 (33%), Positives = 39/63 (61%)
Frame = +2
Query: 509 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEPVVNDLLKTPKRTKGGKEVDVKRA 688
++++FS++GTI V+ K + +GF F+T+ES VN++LK +E++ KR+
Sbjct: 66 LKDYFSQWGTI--VDCVIMKRDGRSRGFGFVTYESSDSVNEVLKKKDHVLDDREIEPKRS 123
Query: 689 TPK 697
P+
Sbjct: 124 VPR 126
Score = 44.0 bits (99), Expect = 1e-04
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 7/73 (9%)
Frame = +3
Query: 255 TTDKELRDHFGAY------GEIESINVKTD-PNTGRSRGFAFIVFKAPESIDKVMAAGEH 413
T +++++++F + GE+ +++K D N R RGFAF+ F E ++KV A H
Sbjct: 150 TVEEDIKEYFNSLCRKNGMGEVIDVDLKRDRDNPKRIRGFAFVTFDNDEIVEKVCAMKYH 209
Query: 414 TINNKKVDPKKAK 452
I K+ + KKA+
Sbjct: 210 EIRMKQCEVKKAE 222
Score = 34.7 bits (76), Expect = 0.073
Identities = 15/56 (26%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +2
Query: 533 GTILEVEMPFDKTKNQR-KGFCFITFESEPVVNDLLKTPKRTKGGKEVDVKRATPK 697
G +++V++ D+ +R +GF F+TF+++ +V + K+ +VK+A P+
Sbjct: 169 GEVIDVDLKRDRDNPKRIRGFAFVTFDNDEIVEKVCAMKYHEIRMKQCEVKKAEPQ 224
>SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36)
Length = 328
Score = 55.2 bits (127), Expect = 5e-08
Identities = 33/91 (36%), Positives = 44/91 (48%)
Frame = +3
Query: 213 EDAMKTFCWWAELGTTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 392
+D K F TT + L+++F YGE+ +++K D TGR RGFAF+ FK D
Sbjct: 26 DDIGKLFVGGLSYETTKESLKEYFSKYGELVGVDIKMDALTGRPRGFAFVQFKHQSEADA 85
Query: 393 VMAAGEHTINNKKVDPKKAKARHGKIFVGGL 485
+ I K R KIFVGGL
Sbjct: 86 IDPKPAAPIG------KPPHLRVKKIFVGGL 110
Score = 54.4 bits (125), Expect = 8e-08
Identities = 23/66 (34%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Frame = +3
Query: 255 TTDKELRDHFG-AYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKK 431
T+D+++R++FG AY ++ I T+ ++ R RGF F+ F + +++DK+ H I K
Sbjct: 114 TSDEKIREYFGKAYAPVKEIEYITEHSSNRRRGFCFVSFDSEDTVDKICETQFHNIEGNK 173
Query: 432 VDPKKA 449
V+ K+A
Sbjct: 174 VEVKRA 179
Score = 54.4 bits (125), Expect = 8e-08
Identities = 24/64 (37%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Frame = +2
Query: 509 IRNFFSE-FGTILEVEMPFDKTKNQRKGFCFITFESEPVVNDLLKTPKRTKGGKEVDVKR 685
IR +F + + + E+E + + N+R+GFCF++F+SE V+ + +T G +V+VKR
Sbjct: 119 IREYFGKAYAPVKEIEYITEHSSNRRRGFCFVSFDSEDTVDKICETQFHNIEGNKVEVKR 178
Query: 686 ATPK 697
A PK
Sbjct: 179 ALPK 182
Score = 30.3 bits (65), Expect = 1.6
Identities = 9/36 (25%), Positives = 23/36 (63%)
Frame = +2
Query: 509 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 616
++ +FS++G ++ V++ D + +GF F+ F+ +
Sbjct: 45 LKEYFSKYGELVGVDIKMDALTGRPRGFAFVQFKHQ 80
>SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 50.8 bits (116), Expect = 1e-06
Identities = 36/92 (39%), Positives = 51/92 (55%), Gaps = 15/92 (16%)
Frame = +3
Query: 255 TTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF---KAPESI--DKVMAAGEHTI 419
TT++ LR++F AYGE+ + V D T +SRGF ++ F K ++ DKV G H I
Sbjct: 25 TTNETLREYFEAYGELTDVVVICDSATKKSRGFGYVTFADYKVTRNVLKDKV-ENGAHRI 83
Query: 420 NNKKVDPKKAKARHG----------KIFVGGL 485
+ K+V+ K+A R KIFVGGL
Sbjct: 84 DGKEVEVKRAIPRDDNSATSHEKTKKIFVGGL 115
Score = 41.5 bits (93), Expect = 6e-04
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Frame = +2
Query: 509 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEPVVNDLLKTPKRTKG----GKEVD 676
+R +F +G + +V + D + +GF ++TF V ++LK GKEV+
Sbjct: 30 LREYFEAYGELTDVVVICDSATKKSRGFGYVTFADYKVTRNVLKDKVENGAHRIDGKEVE 89
Query: 677 VKRATPK 697
VKRA P+
Sbjct: 90 VKRAIPR 96
Score = 31.5 bits (68), Expect = 0.68
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +2
Query: 563 DKTKNQRKGFCFITFESEPVVNDLLKTPKRTKGGKEVDVKRATPK 697
D+TK+ +GF F+ +E ++L K GK V+ K+ATP+
Sbjct: 147 DETKH--RGFAFVELNNEDQADELCCVKKIHVKGKMVEAKKATPR 189
Score = 27.9 bits (59), Expect = 8.4
Identities = 32/136 (23%), Positives = 55/136 (40%), Gaps = 6/136 (4%)
Frame = +3
Query: 69 FAQDITTDNQLNGNAENGGG--DSQDHNSAAAPGRDDDRCEXXXXXXXXXEDAMKTFCWW 242
FA T N L ENG D ++ A RDD+ E K F
Sbjct: 62 FADYKVTRNVLKDKVENGAHRIDGKEVEVKRAIPRDDNSATSH-------EKTKKIFVGG 114
Query: 243 AELGTTDKELRDHFGAYGE--IESINV--KTDPNTGRSRGFAFIVFKAPESIDKVMAAGE 410
T +++++ + E ++ +++ K + T + RGFAF+ + D++ +
Sbjct: 115 LPEDATKEDIQEAIESLLEEKVDKVDLIMKKEDET-KHRGFAFVELNNEDQADELCCVKK 173
Query: 411 HTINNKKVDPKKAKAR 458
+ K V+ KKA R
Sbjct: 174 IHVKGKMVEAKKATPR 189
>SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 420
Score = 49.6 bits (113), Expect = 2e-06
Identities = 28/78 (35%), Positives = 44/78 (56%)
Frame = +3
Query: 252 GTTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKK 431
GT ++ L+D+F +GE+ES+ + G SR + F++FK + K + H IN K
Sbjct: 90 GTDEEGLKDYFEQFGEVESVRIMR-TFLGYSRNYGFVLFK-DDGPSKEVLKKSHVINGKT 147
Query: 432 VDPKKAKARHGKIFVGGL 485
VD K++ I+VGGL
Sbjct: 148 VDVGKSR-NFRVIYVGGL 164
Score = 41.5 bits (93), Expect = 6e-04
Identities = 15/60 (25%), Positives = 34/60 (56%)
Frame = +3
Query: 255 TTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKV 434
T + ++ +F YG++ +++ TD TG+S+G + + P +++K++ H I +V
Sbjct: 330 TKELDVLRYFRPYGQVAKVHILTDRETGKSKGCGVVKLRHPGTVNKILEEPVHVIGKSQV 389
Score = 29.1 bits (62), Expect = 3.6
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = +3
Query: 246 ELGTTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINN 425
+ TT ELR++F GE+ I++ N+ + A + F+ + I KV+ HTI
Sbjct: 244 DFDTTVDELREYFEKCGELTGIDLLI--NSEKRTCAAIVFFRNLKDIKKVVEE-NHTIKG 300
Query: 426 KKV 434
KV
Sbjct: 301 LKV 303
>SB_35971| Best HMM Match : RRM_1 (HMM E-Value=0.013)
Length = 665
Score = 45.6 bits (103), Expect = 4e-05
Identities = 21/45 (46%), Positives = 27/45 (60%)
Frame = +3
Query: 324 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 458
D T R RGF F+ F++ S DK H INNKKV+ KKA+ +
Sbjct: 5 DKATQRHRGFGFVTFESENSADKACDTQYHLINNKKVEVKKAQPK 49
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/46 (41%), Positives = 26/46 (56%)
Frame = +2
Query: 560 FDKTKNQRKGFCFITFESEPVVNDLLKTPKRTKGGKEVDVKRATPK 697
FDK + +GF F+TFESE + T K+V+VK+A PK
Sbjct: 4 FDKATQRHRGFGFVTFESENSADKACDTQYHLINNKKVEVKKAQPK 49
>SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 718
Score = 41.9 bits (94), Expect = 5e-04
Identities = 19/46 (41%), Positives = 26/46 (56%)
Frame = +3
Query: 261 DKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 398
D+ LR+ F YG I S V D + G S+GF F+ F +PE K +
Sbjct: 225 DERLREEFSPYGTISSAKVMKD-DKGNSKGFGFVCFSSPEEATKAV 269
Score = 41.1 bits (92), Expect = 8e-04
Identities = 20/69 (28%), Positives = 40/69 (57%)
Frame = +3
Query: 261 DKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDP 440
D+++++ G+I S+ V TDP G+S+GF F+ F+ PE ++ + + +N K++
Sbjct: 122 DEQMKEICAEAGKIVSLKVMTDPE-GKSKGFGFVSFETPEEAEEAV----NVLNGKEIGG 176
Query: 441 KKAKARHGK 467
++ A K
Sbjct: 177 RRLWAGRAK 185
>SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 41.1 bits (92), Expect = 8e-04
Identities = 18/49 (36%), Positives = 31/49 (63%)
Frame = +2
Query: 542 LEVEMPFDKTKNQRKGFCFITFESEPVVNDLLKTPKRTKGGKEVDVKRA 688
LE++M D+ N+ KG+CF+ F +E +V+ L GK+V++K+A
Sbjct: 133 LEIKMVRDRETNKFKGYCFVNFPNEHIVDKLYLVRHIQVKGKDVEMKKA 181
Score = 40.3 bits (90), Expect = 0.001
Identities = 32/105 (30%), Positives = 54/105 (51%), Gaps = 17/105 (16%)
Frame = +3
Query: 222 MKTFCWWAELGTTDKELRDHF-----GAYGEIESINVKTDPNTGRSRGFAFIVFK-APES 383
MK F TT++ +R +F G+ ++ S+++ P G+SR F F+ F +
Sbjct: 8 MKLFVGGLNEDTTEETVRAYFKSFCEGSEADVSSVSLAKTPE-GKSRKFCFVEFSNGSDI 66
Query: 384 IDKVMAAGE-HTINNKKVDPKKAKARHG----------KIFVGGL 485
ID ++ E H+I+NK+V+ K+A R K+F+GGL
Sbjct: 67 IDNIVFNFESHSIDNKQVEVKRAMPRDDPNELAHVRTKKLFIGGL 111
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = +3
Query: 309 INVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA 449
I + D T + +G+ F+ F +DK+ + K V+ KKA
Sbjct: 135 IKMVRDRETNKFKGYCFVNFPNEHIVDKLYLVRHIQVKGKDVEMKKA 181
>SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15)
Length = 145
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Frame = +3
Query: 270 LRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKV--DPK 443
L FG YG IE +++ TG+S+GF ++ ++ ES + + AG H I+ K V +PK
Sbjct: 79 LESVFGPYGAIEDLSI-IRTQTGKSKGFGYVTYENAESAQRAL-AGTHIIDGKWVIAEPK 136
>SB_6474| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 39.5 bits (88), Expect = 0.003
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +3
Query: 345 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 458
+GF F+ F+ P +I+ V+A H ++ K +DPK A R
Sbjct: 142 KGFGFVTFRDPATIESVLAKKPHILDGKTIDPKPAVPR 179
Score = 32.7 bits (71), Expect = 0.30
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +2
Query: 560 FDKTKNQRKGFCFITFESEPVVNDLLKTPKRTKGGKEVDVKRATPK 697
F++ KGF F+TF + +L GK +D K A P+
Sbjct: 134 FERRARMLKGFGFVTFRDPATIESVLAKKPHILDGKTIDPKPAVPR 179
Score = 28.3 bits (60), Expect = 6.4
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +3
Query: 225 KTFCWWAELGTTDKELRDHFGAYGEIE 305
K F GTT+++L+++F YG +E
Sbjct: 203 KVFIGGLAFGTTEEDLKEYFSTYGMVE 229
>SB_39934| Best HMM Match : RRM_1 (HMM E-Value=6.5e-24)
Length = 343
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/66 (28%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Frame = +3
Query: 255 TTDKELRDHFGAYGE-IESIN-VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNK 428
T + + ++F GE +E + ++T +G+S+GFAF+ + E+++ V+ +H I+N
Sbjct: 53 TVESTIFEYFSTLGEQVEHVKCIRT--LSGKSKGFAFVRLRKKEAVESVLGRDDHVIDNS 110
Query: 429 KVDPKK 446
V +K
Sbjct: 111 DVSMEK 116
Score = 31.9 bits (69), Expect = 0.52
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +2
Query: 509 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEPVVNDLLKTPKRTKGGKEV 673
I FS G I V +P + +RKG C +TF S +++K K G ++
Sbjct: 137 ILEHFSSSGEIASVYIPENLKTKERKGHCIVTFASVTEAFEVVKKRKHHIHGYDI 191
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/54 (22%), Positives = 27/54 (50%)
Frame = +3
Query: 261 DKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTIN 422
+ ++ +HF + GEI S+ + + T +G + F + +V+ +H I+
Sbjct: 134 ESQILEHFSSSGEIASVYIPENLKTKERKGHCIVTFASVTEAFEVVKKRKHHIH 187
>SB_13046| Best HMM Match : La (HMM E-Value=5e-23)
Length = 442
Score = 39.1 bits (87), Expect = 0.003
Identities = 28/70 (40%), Positives = 34/70 (48%), Gaps = 7/70 (10%)
Frame = +2
Query: 509 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES----EPVV---NDLLKTPKRTKGGK 667
++ FSEFG +L V +P K + KGF FI FES E VV N KT K K
Sbjct: 104 LKKVFSEFGKVLYVSLPRFKHNGEIKGFAFIEFESKQQAEHVVQMFNRESKTKKEEKREP 163
Query: 668 EVDVKRATPK 697
+D K K
Sbjct: 164 SIDDKTKIKK 173
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/59 (22%), Positives = 30/59 (50%)
Frame = +3
Query: 270 LRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKK 446
L+ F +G++ +++ + G +GFAFI F++ + + V+ KK + ++
Sbjct: 104 LKKVFSEFGKVLYVSLPRFKHNGEIKGFAFIEFESKQQAEHVVQMFNRESKTKKEEKRE 162
>SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 38.3 bits (85), Expect = 0.006
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = +3
Query: 255 TTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 398
TT ++L+ F YG++ I + D NT SRGFAF+ F + M
Sbjct: 27 TTVEDLKQVFKKYGDLGDIYIPRDRNTHESRGFAFVRFYEKRDAEDAM 74
>SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20)
Length = 1313
Score = 37.9 bits (84), Expect = 0.008
Identities = 13/43 (30%), Positives = 27/43 (62%)
Frame = +3
Query: 270 LRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 398
+++ F YG ++++++ TD SRGFA++ + PE +K +
Sbjct: 1173 VQEIFSVYGRVKTVDLPTDRTNNLSRGFAYVEYVDPEECEKAL 1215
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +2
Query: 509 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEPVVNDLLKTPKRTK-GGKEVDVKR 685
++ FS +G + V++P D+T N +GF ++ + LK + G+E+ V+
Sbjct: 1173 VQEIFSVYGRVKTVDLPTDRTNNLSRGFAYVEYVDPEECEKALKHMDGGQIDGQEIAVQS 1232
Query: 686 ATP 694
P
Sbjct: 1233 VLP 1235
>SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07)
Length = 252
Score = 37.5 bits (83), Expect = 0.010
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +3
Query: 303 ESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 398
E++N+ TD TGR RGF F+ F + E ++K +
Sbjct: 123 EAVNIITDRETGRPRGFGFVTFGSKEEMEKAI 154
>SB_37827| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 628
Score = 37.5 bits (83), Expect = 0.010
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 294 GEIESINVKTDPNTGRSRGFAFIVFKAPESI 386
G +E++ + TD NTG+ R F F+ F +P S+
Sbjct: 481 GPLENVRIPTDKNTGQQRSFGFVEFSSPVSV 511
>SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18)
Length = 268
Score = 36.7 bits (81), Expect = 0.018
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = +3
Query: 255 TTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 389
TT+ ELR F YG ++ + D + G S+G+AFI F++ E D
Sbjct: 19 TTESELRAFFEEYGVVKESKIVRDKH-GVSKGYAFITFESQEVAD 62
Score = 36.7 bits (81), Expect = 0.018
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = +2
Query: 509 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEPVVNDL 634
+R FF E+G + E ++ DK KG+ FITFES+ V + L
Sbjct: 24 LRAFFEEYGVVKESKIVRDK-HGVSKGYAFITFESQEVADGL 64
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 36.3 bits (80), Expect = 0.024
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Frame = +3
Query: 261 DKELRDHFGAYGEI-ESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA--GEHTIN 422
+K L D F A+G I ++ + D +TG S+GFAFI F + ++ D + A G++ N
Sbjct: 113 EKLLYDTFSAFGVILQTPKIMRDSDTGNSKGFAFINFASFDASDAAIEAMNGQYLCN 169
>SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 35.9 bits (79), Expect = 0.032
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +3
Query: 258 TDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 404
T+ +L F YG++ + + D T SRG AFI+F +S +AA
Sbjct: 22 TNSDLHKVFERYGKVVKVTILRDKETRESRGVAFILFIDRQSAQNAVAA 70
>SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 35.9 bits (79), Expect = 0.032
Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Frame = +3
Query: 258 TDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK-VMAAGEHTINNK-- 428
+ ++++ FG G + S + D TG+S G+AF+ + P+ +K V + NK
Sbjct: 39 SQEDIKKIFGTVGNVTSCKLIRDRATGQSLGYAFVNYDNPDDANKAVREMNGARLQNKTL 98
Query: 429 KVD---PKKAKARHGKIFVGGL 485
KV P + ++ +++ GL
Sbjct: 99 KVSFARPSSTEIKNANLYISGL 120
>SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18)
Length = 209
Score = 35.5 bits (78), Expect = 0.042
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = +3
Query: 255 TTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK 392
TTD++L F +G I S V D TG S +AFI F+ E ++
Sbjct: 131 TTDEDLEIIFSRFGTILSCEVIRDQKTGESLQYAFIEFEKDEDCER 176
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 521 FSEFGTILEVEMPFDKTKNQRKGFCFITFESE 616
FS FGTIL E+ D+ + + FI FE +
Sbjct: 140 FSRFGTILSCEVIRDQKTGESLQYAFIEFEKD 171
>SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 514
Score = 35.5 bits (78), Expect = 0.042
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = +3
Query: 213 EDAMKTFCWWAELGTTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 368
+D FC ++L + F G++ + + +D N+ RS+G A+I F
Sbjct: 143 KDQRTVFCMQLARNIRPRDLEEFFSKVGQVSDVRIISDRNSRRSKGIAYIEF 194
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +2
Query: 509 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 607
++ F FGT+ V++ +D N+ KG+ F+ F
Sbjct: 258 VKAVFEPFGTVDSVQLIYDSETNRSKGYGFVQF 290
>SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24)
Length = 407
Score = 35.1 bits (77), Expect = 0.056
Identities = 13/58 (22%), Positives = 31/58 (53%)
Frame = +3
Query: 261 DKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKV 434
++ LR+ F G +ES+ + D TG +GF +++F++ +++ + +K+
Sbjct: 69 EEPLRELFTTCGNVESVRLIRDRKTGIGKGFGYVLFESKDAVVFALKMNNAEFKGRKI 126
Score = 31.5 bits (68), Expect = 0.68
Identities = 18/64 (28%), Positives = 30/64 (46%)
Frame = +2
Query: 509 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEPVVNDLLKTPKRTKGGKEVDVKRA 688
+R F+ G + V + D+ KGF ++ FES+ V LK G+++ V +
Sbjct: 72 LRELFTTCGNVESVRLIRDRKTGIGKGFGYVLFESKDAVVFALKMNNAEFKGRKIRVFPS 131
Query: 689 TPKP 700
KP
Sbjct: 132 KDKP 135
>SB_31413| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 381
Score = 35.1 bits (77), Expect = 0.056
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Frame = +3
Query: 294 GEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKK----AKAR- 458
GEI ++ DP TG ++GFAF F S + + T+N+K + P + K+R
Sbjct: 177 GEIREFRLQMDPATGLNKGFAFCTFTEQTSAYQAIT----TLNDKDIRPGRRLAICKSRS 232
Query: 459 HGKIFVGGL 485
+ ++FV G+
Sbjct: 233 NSRLFVKGI 241
>SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 35.1 bits (77), Expect = 0.056
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +3
Query: 306 SINVKTDPNTGRSRGFAFIVFKAPESIDKVM 398
S+ V TD TGR RGF F+ F + + +DK +
Sbjct: 37 SVKVITDRETGRPRGFGFVTFGSEDEMDKAI 67
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +3
Query: 261 DKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESI-DKVMAAGEHTINNKKVD 437
+ +L+D F Y ++ + V +D T R RGFAF+ F + +++ D + + + +
Sbjct: 243 EADLQDRFSRY-DVVDVQVISDRETQRPRGFAFVTFGSKKNMEDAINELDGQEFDGRSMK 301
Query: 438 PKKAKAR 458
+A++R
Sbjct: 302 VNQARSR 308
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +2
Query: 539 ILEVEMPFDKTKNQRKGFCFITFESEPVVNDLL-KTPKRTKGGKEVDVKRATPK 697
+L V++ D+ + +GF F+TF SE ++ + K G+ + V +A P+
Sbjct: 35 LLSVKVITDRETGRPRGFGFVTFGSEDEMDKAIDKFDGEDLDGRPMKVNKAQPR 88
>SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 1026
Score = 35.1 bits (77), Expect = 0.056
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +3
Query: 255 TTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 404
+T K + + F +G+I V D T S+G AF+ +++ ES+ + +AA
Sbjct: 427 STQKNITNLFKQFGDIAYCKVVVDHLTQHSKGSAFVKYRSAESVTQCLAA 476
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +2
Query: 509 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EPVVNDLLKTPKRTKG 661
I N F +FG I ++ D KG F+ + S E V L T + ++G
Sbjct: 432 ITNLFKQFGDIAYCKVVVDHLTQHSKGSAFVKYRSAESVTQCLAATDEDSEG 483
>SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28)
Length = 419
Score = 34.7 bits (76), Expect = 0.073
Identities = 22/66 (33%), Positives = 33/66 (50%)
Frame = +3
Query: 255 TTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKV 434
TTD +L YG I S D +T +G+ F+ F++P S K +AA + NK +
Sbjct: 111 TTDDDLVRLCHKYGTIISTKAILDKDTNLCKGYGFVDFESPISAQKAVAA----LVNKGI 166
Query: 435 DPKKAK 452
+ AK
Sbjct: 167 QAQMAK 172
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 527 EFGTILEVEMPFDKTKNQRKGFCFITFES 613
++GTI+ + DK N KG+ F+ FES
Sbjct: 122 KYGTIISTKAILDKDTNLCKGYGFVDFES 150
>SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25)
Length = 159
Score = 34.3 bits (75), Expect = 0.097
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +3
Query: 297 EIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 398
++ + V TD TGR RGF F+ F + E ++K +
Sbjct: 29 DVVDVKVITDRETGRPRGFGFVTFGSKEEMEKAI 62
>SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 34.3 bits (75), Expect = 0.097
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = +3
Query: 270 LRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA 449
+++ F G + V +P G SRGFAF+ + E +K G+ N ++V+
Sbjct: 222 IKELFSQTGNVTFAQVAINPANGGSRGFAFVDYATAEEAEK----GQRAHNGRQVEGSNI 277
Query: 450 KARHG 464
+ +G
Sbjct: 278 RVAYG 282
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +3
Query: 258 TDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 383
T+ + D YG IE + + TG S+G+ F+ + E+
Sbjct: 125 TETQFGDLMSPYGNIERLFLVRSEVTGDSKGYGFVEYATREN 166
>SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18)
Length = 291
Score = 33.9 bits (74), Expect = 0.13
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = +2
Query: 509 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEPVVNDLLKTPKRTKGGKEVDVK-- 682
+R FF++FG I E + D+ + KG+ F+T + K + G++ +V
Sbjct: 26 LRKFFAQFGEIREAVVIKDRVTKKSKGYGFVTMATSDAAELACKNKRPMIEGRQANVNLA 85
Query: 683 --RATPKP 700
A PKP
Sbjct: 86 YLGAKPKP 93
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +3
Query: 261 DKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESID 389
D LR F +GEI V D T +S+G+ F+ ++ +
Sbjct: 23 DDALRKFFAQFGEIREAVVIKDRVTKKSKGYGFVTMATSDAAE 65
>SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0)
Length = 298
Score = 33.5 bits (73), Expect = 0.17
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 521 FSEFGTILEVEMPFDKTKNQRKGFCFITFE 610
F FG I +V++P D T ++ +GF F+ FE
Sbjct: 25 FIPFGDITDVQIPMDYTTSKHRGFGFVEFE 54
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +3
Query: 261 DKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 380
+K L F +G+I + + D T + RGF F+ F+ E
Sbjct: 18 EKVLHAAFIPFGDITDVQIPMDYTTSKHRGFGFVEFEFAE 57
>SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 291
Score = 33.5 bits (73), Expect = 0.17
Identities = 13/40 (32%), Positives = 25/40 (62%)
Frame = +3
Query: 267 ELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESI 386
E+ F +G +E +++ D +GRSRGF F++ ++ + I
Sbjct: 24 EIEQAFEEFG-VEKVDILRDKESGRSRGFGFVLLQSADQI 62
>SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0)
Length = 672
Score = 33.5 bits (73), Expect = 0.17
Identities = 16/58 (27%), Positives = 24/58 (41%)
Frame = +3
Query: 225 KTFCWWAELGTTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 398
+ FC TD+ L F Y + D + +S+G+ F+ FK P K M
Sbjct: 218 RIFCGDLGSEVTDESLTRAFAKYTSFLKAKIVRDKKSNKSKGYGFVSFKDPNDFIKAM 275
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = +2
Query: 521 FSEFGTILEVEMPFDKTKNQRKGFCFITFESEPVVNDLLKTPKRTKGGKEVDVKRATP 694
F+++ + L+ ++ DK N+ KG+ F++F+ +P ND +K + D TP
Sbjct: 237 FAKYTSFLKAKIVRDKKSNKSKGYGFVSFK-DP--NDFIKAMREMNVLSFADQHLLTP 291
>SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 593
Score = 33.5 bits (73), Expect = 0.17
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +3
Query: 261 DKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 383
++ +R F +G I I++ DP + +GFAF+ + PE+
Sbjct: 115 EEHIRTAFHPFGPINKIDLSWDPLNMKHKGFAFVEYDLPEA 155
Score = 33.1 bits (72), Expect = 0.22
Identities = 11/48 (22%), Positives = 30/48 (62%)
Frame = +3
Query: 261 DKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 404
+ +++ F A+G++ ++ +P TG+ +G+ FI ++ +S + +A+
Sbjct: 212 EDDIKSVFEAFGKVVHCSLSKEPMTGKHKGYGFIEYENQQSANDAIAS 259
Score = 32.3 bits (70), Expect = 0.39
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +2
Query: 509 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEPVVNDLLKTPKR-TKGGKEVDVKR 685
I++ F FG ++ + + + KG+ FI +E++ ND + + GG+ + V R
Sbjct: 215 IKSVFEAFGKVVHCSLSKEPMTGKHKGYGFIEYENQQSANDAIASMNLFDLGGQFLRVGR 274
Query: 686 ATPKP 700
A P
Sbjct: 275 AITPP 279
>SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 721
Score = 33.5 bits (73), Expect = 0.17
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = +3
Query: 261 DKELRDHFGAYGEIESINVKTDPNTGRSRGFAFI---VFKAPESIDKVMAAGEHTINNKK 431
+ ++ + F YGEI++++V D TG +G+A + FK +S + + E N
Sbjct: 306 EDDIHELFSDYGEIKNLHVNLDRRTGFIKGYALVEYETFKEAQSALEALNGAEMLGQNIS 365
Query: 432 VD 437
VD
Sbjct: 366 VD 367
>SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 33.1 bits (72), Expect = 0.22
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +2
Query: 509 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEPVVNDLLKT 643
I F + G + +V++ +D + Q KGFCF+T ++ + ++T
Sbjct: 291 ITALFGQCGIVNKVDIMWDWQRQQCKGFCFVTMATQEEAQNAIQT 335
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 261 DKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 368
+ E R F AYG I + + D +TG +G F+++
Sbjct: 146 EAEFRKAFEAYGNIVNCRLLRDKSTGLPKGCGFVLY 181
>SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1208
Score = 33.1 bits (72), Expect = 0.22
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +3
Query: 291 YGEIESINVKTDPNTGRSRGFAFIVFKAPES 383
YGEI ++N+ D TG+ +GF F+ ++ S
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFLCYEDQRS 32
Score = 31.5 bits (68), Expect = 0.68
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 530 FGTILEVEMPFDKTKNQRKGFCFITFESE 616
+G I+ V + DK ++KGFCF+ +E +
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFLCYEDQ 30
>SB_47564| Best HMM Match : RRM_1 (HMM E-Value=0.23)
Length = 44
Score = 33.1 bits (72), Expect = 0.22
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +3
Query: 291 YGEIESINVKTDPNTGRSRGFAFIVFKAPES 383
YGEI ++N+ D TG+ +GF F+ ++ S
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFLCYEDQRS 32
Score = 31.5 bits (68), Expect = 0.68
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +2
Query: 530 FGTILEVEMPFDKTKNQRKGFCFITFESE 616
+G I+ V + DK ++KGFCF+ +E +
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFLCYEDQ 30
>SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15)
Length = 171
Score = 32.7 bits (71), Expect = 0.30
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = +3
Query: 252 GTTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEH 413
G + E++ F +G + I + + RS+G+AF+ F A + + K+ A H
Sbjct: 108 GFFENEIKKFFEQFGTVNRIRLSRSKKSARSKGYAFVEF-ACDEVAKIAADTMH 160
Score = 32.7 bits (71), Expect = 0.30
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +2
Query: 509 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEPV 622
I+ FF +FGT+ + + K + KG+ F+ F + V
Sbjct: 114 IKKFFEQFGTVNRIRLSRSKKSARSKGYAFVEFACDEV 151
>SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28)
Length = 440
Score = 31.9 bits (69), Expect = 0.52
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Frame = +3
Query: 225 KTFCWWAELGTTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 404
K +C T+K+L + +G++ ++ K G+A++VFK + D+ +AA
Sbjct: 4 KVYCGRLPATATEKDLENLVKVFGKVREVDFK--------EGYAYVVFKENKDADRAVAA 55
Query: 405 -GEHTINNKKVDPKKAK-ARHGKIFVGG 482
+ K+ +KAK R+G VGG
Sbjct: 56 LNNSEFHGAKILMEKAKEMRNG---VGG 80
>SB_20581| Best HMM Match : RRM_1 (HMM E-Value=1.7e-07)
Length = 97
Score = 31.9 bits (69), Expect = 0.52
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +2
Query: 509 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 607
IR+ F ++GTI +V + DK + +G C++ F
Sbjct: 39 IRSAFEQYGTIEDVWVVKDKATKENRGVCYVKF 71
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = +3
Query: 264 KELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPK 443
+++R F YG IE + V D T +RG ++ F S +A E N DPK
Sbjct: 37 EDIRSAFEQYGTIEDVWVVKDKATKENRGVCYVKFVKASS--AALACEEMDGRNIGDDPK 94
Query: 444 KAK 452
K
Sbjct: 95 PIK 97
>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/70 (28%), Positives = 36/70 (51%)
Frame = +3
Query: 258 TDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVD 437
T+++LRDHF +GE+ SI++ N AF+ F + + + AA + + N +
Sbjct: 316 TEQDLRDHFYQFGELRSISMVPRQNC------AFVCFTSRAAAE---AAADRSFNKLILK 366
Query: 438 PKKAKARHGK 467
++ K GK
Sbjct: 367 GRRLKIMWGK 376
>SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1309
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +2
Query: 545 EVEMPFDKTKNQRKGFCFITF-ESEPVVNDLLKTPKRTKGGKEVDVKRATPK 697
EV + D KN+ KGF F++F E + + T GGK+V A K
Sbjct: 541 EVRVVKDPAKNKSKGFGFVSFVRREDAAKAIAEMDSVTIGGKQVKTNWAARK 592
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +3
Query: 309 INVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEH-TINNKKV 434
+ V DP +S+GF F+ F E K +A + TI K+V
Sbjct: 542 VRVVKDPAKNKSKGFGFVSFVRREDAAKAIAEMDSVTIGGKQV 584
>SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21)
Length = 304
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +3
Query: 255 TTDKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVF 368
T + +L++ F G I I + D T +S+GFAFI F
Sbjct: 192 TRESDLQELFRPLGPISRIFLAKDKFTNQSKGFAFINF 229
>SB_25463| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 273
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -2
Query: 700 WF-WCCTLHIDLLSTFCSFGSLKQIIYNWLRFKCDETE 590
WF W C L I LS++ SLK +Y W + ++ E
Sbjct: 126 WFPWSCFLRIRYLSSWRQLLSLKNTMYRWPQLPSNDCE 163
>SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 610
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 5/80 (6%)
Frame = +3
Query: 261 DKELRDHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDP 440
+ EL F G I + DP +G ++GFAF F + + ++NK++ P
Sbjct: 165 EDELIPVFEECGHIYDFRLMIDPISGLTKGFAFCTFSNKDEAQNAV----KKLDNKEIRP 220
Query: 441 KK-----AKARHGKIFVGGL 485
K + ++FVG +
Sbjct: 221 GKRLGVCISVANSRLFVGSI 240
>SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1291
Score = 29.9 bits (64), Expect = 2.1
Identities = 10/33 (30%), Positives = 22/33 (66%)
Frame = +3
Query: 261 DKELRDHFGAYGEIESINVKTDPNTGRSRGFAF 359
+ ++++ ++GE+ + N+ D TG S+G+AF
Sbjct: 686 EDQVKELLSSFGELRAFNLVKDSATGLSKGYAF 718
>SB_15594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 672
Score = 29.5 bits (63), Expect = 2.8
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = -3
Query: 699 GFGVARFTSTSFP---PFVLLGVLSKSFTTGSDSNVMKQKPFLWFFVLSK 559
G G+ R++S S P F G +S S+T V ++ FL FFVL K
Sbjct: 388 GSGITRYSSLSVPFYCKFSSHGDVSLSYTIKKSVPVWHEEKFLSFFVLYK 437
>SB_46941| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 231
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 57 NNDNFAQDITTDNQLNGNAE-NGGGDSQDHNS 149
NND+ D T D+ N N + NGGG D+N+
Sbjct: 193 NNDDDDDDDTDDDDHNNNDDDNGGGGDDDNNN 224
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +3
Query: 60 NDNFAQDITTDNQLN-GNAENGGGDSQDHNS 149
+DNF DI+ D LN G A N + ++NS
Sbjct: 335 HDNFNDDISNDGNLNGGGANNNNNKNNNYNS 365
>SB_18026| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 621
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = +3
Query: 300 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVD 437
I+ + K+ N G++ G AF+VFK+ K + I ++ ++
Sbjct: 361 IDLLKHKSGKNQGKNTGVAFVVFKSNNDASKALKMDRSYIGHRYIE 406
>SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11)
Length = 248
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 300 IESINVKTDPNTGRSRGFAFIVFKAPES 383
+ + V TD TGR RGF F+ +A ++
Sbjct: 107 VVDVRVITDRETGRPRGFGFVTLEAKKT 134
>SB_46435| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 558
Score = 28.7 bits (61), Expect = 4.8
Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 8/70 (11%)
Frame = +3
Query: 213 EDAMKTFCWWAELGTTDKELRDH-----FGAYGEIESINVK---TDPNTGRSRGFAFIVF 368
+DA+ W +G DK L + +GEIE PN G RG+ F+ F
Sbjct: 381 DDAVSERKLW--IGNLDKRLSEFNILKILQQFGEIEHFQFLFHGNGPNRGEPRGYCFVEF 438
Query: 369 KAPESIDKVM 398
K E K +
Sbjct: 439 KKKEDARKAL 448
>SB_41060| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 122
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +3
Query: 60 NDNFAQDITTDNQLNGNA-ENGGGDSQDHNSAAAPGRDDD 176
ND+ DI D+ NGN +NG + D N G DDD
Sbjct: 20 NDDDGDDIDDDDG-NGNGNDNGDDNDDDDNDDEGNGDDDD 58
>SB_18084| Best HMM Match : DUF801 (HMM E-Value=0.37)
Length = 599
Score = 28.3 bits (60), Expect = 6.4
Identities = 9/30 (30%), Positives = 22/30 (73%)
Frame = +3
Query: 60 NDNFAQDITTDNQLNGNAENGGGDSQDHNS 149
ND+ A D++ ++ + G+ +NGG D+ ++++
Sbjct: 180 NDDSASDVSIEDIIYGDDDNGGDDNDNYDN 209
>SB_45368| Best HMM Match : fn2 (HMM E-Value=3.1e-32)
Length = 1206
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +3
Query: 66 NFAQDITT--DNQLNGNAENGGGDSQDHNSAAAPGRDDD 176
+F ++T +N NGN E+ D D +AAA DDD
Sbjct: 536 SFRSSLSTVCNNCENGNEEDNDDDDDDDAAAAAAADDDD 574
>SB_7529| Best HMM Match : Toxin_29 (HMM E-Value=0.0017)
Length = 691
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +3
Query: 57 NNDNFAQDITTDNQLNGNAENGGGDSQD 140
+++++A D DN +NG+ ++GGGD D
Sbjct: 585 DDEDYAGD--GDNDVNGDGDSGGGDDDD 610
>SB_1073| Best HMM Match : Ribosomal_L12 (HMM E-Value=2.2)
Length = 244
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +3
Query: 54 ANNDNFAQDITTDNQLNGNAENGGGDSQDHNSAAAPGRDDD 176
A N+ +A+ +T +N N N N ++ ++N+ DDD
Sbjct: 160 AINEKYAKIMTDNNNNNNNNNNNNNNNNNNNNNNNNNNDDD 200
>SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33)
Length = 392
Score = 27.9 bits (59), Expect = 8.4
Identities = 9/36 (25%), Positives = 20/36 (55%)
Frame = +2
Query: 509 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 616
++ FSE G ++ + FD+ + KG+ F ++ +
Sbjct: 41 LKEIFSEVGPVISFRLVFDRETGKPKGYGFCEYKDQ 76
>SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35)
Length = 1118
Score = 27.9 bits (59), Expect = 8.4
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +3
Query: 252 GTTDKELRDHFGAYGEIESINVKTD 326
GTT+ ++R F +YG + IN+K +
Sbjct: 13 GTTEDDVRRFFRSYGRLRDINLKNN 37
>SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 705
Score = 27.9 bits (59), Expect = 8.4
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +3
Query: 57 NNDNFAQDITTDNQLNGNAENGGGDSQDHNS 149
NN+N D +DN + N++N ++ D+N+
Sbjct: 613 NNNNNNNDNNSDNNSDNNSDNNSDNNSDNNN 643
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +3
Query: 57 NNDNFAQDITTDNQLNGNAENGGGDSQDHNS 149
NNDN + D +DN + N++N ++ D+NS
Sbjct: 618 NNDNNS-DNNSDNNSDNNSDNNSDNNNDNNS 647
>SB_20263| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 226
Score = 27.9 bits (59), Expect = 8.4
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = +3
Query: 57 NNDNFAQDITTDNQLNGN--AENGGGDSQDHN 146
NNDN+ + DN N N NG DS D+N
Sbjct: 90 NNDNYDNNGNNDNNDNYNNYDNNGNNDSNDNN 121
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,344,844
Number of Sequences: 59808
Number of extensions: 412808
Number of successful extensions: 2367
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 1201
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2282
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1841633001
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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