Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20579
         (697 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    23   2.4  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    23   3.2  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   4.2  
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    22   5.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.5  

>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/27 (33%), Positives = 11/27 (40%)
 Frame = -1

Query: 415 QRACGFCPKPNLRFPFQWCSDHGHSCW 335
           Q  C +   PN       C+D   SCW
Sbjct: 15  QLECNWSSGPNATLQSSACTDDLSSCW 41


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = +1

Query: 340 NYARGHYTIGKEIVDLVLDRIRKLADQCTG 429
           +YAR     G  IVD+ LD  R L   CTG
Sbjct: 392 SYARAKGLGGIAIVDITLDDFRGL---CTG 418


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 18/69 (26%), Positives = 26/69 (37%), Gaps = 1/69 (1%)
 Frame = -2

Query: 258 NIGSRSTKTARGTCLPAPVSLKKVLKESSPPPMV-LSVGIWPSGWMPCSRQ*SSQQALPI 82
           N+ +    + RGT L    +    L   SPPP+   +VG     W    +   S  + P 
Sbjct: 23  NVKAAEHPSLRGTPLAMLAAQCNKLSNKSPPPLADAAVGKGFHPWKKSPQGAPSPSSTPS 82

Query: 81  WTPAWPTCT 55
             P   T T
Sbjct: 83  SLPTQRTST 91


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -2

Query: 228 RGTCLPAPVSLKKVLKES 175
           RGTC P    LKK L ++
Sbjct: 53  RGTCSPDGEELKKALPDA 70


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 681  YGGRCHRWLHC 649
            Y G C R+LHC
Sbjct: 1287 YPGDCTRYLHC 1297


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,752
Number of Sequences: 336
Number of extensions: 3853
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)