Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20579
(697 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 159 3e-39
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 155 2e-38
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 140 7e-34
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 130 1e-30
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 79 3e-15
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 79 3e-15
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 78 8e-15
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 76 2e-14
03_01_0034 + 318432-318825,318902-319851 76 2e-14
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 76 2e-14
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 74 1e-13
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 67 1e-11
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 66 3e-11
04_01_0383 + 5085697-5085724,5085816-5085927,5087249-5087285,508... 31 1.2
01_01_0524 - 3845637-3845727,3845803-3845896,3846415-3846497,384... 30 1.5
05_07_0299 - 29073900-29073984,29074125-29074158,29074269-290743... 29 2.7
10_03_0016 - 7099862-7099967,7100059-7100357,7101862-7102171,710... 29 3.5
08_01_0312 + 2764744-2767390,2767632-2767990 29 3.5
07_03_1027 - 23371826-23372006,23372110-23372171,23372595-233743... 29 4.7
12_02_0399 - 18600444-18600591,18600626-18601656 28 6.2
07_03_0483 - 18605176-18606118,18606353-18606482,18606609-18606738 28 6.2
02_05_1147 - 34447519-34448042,34448126-34449092,34449458-344496... 28 6.2
01_05_0685 + 24273331-24273569,24275429-24275465,24275739-242758... 28 6.2
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 159 bits (385), Expect = 3e-39
Identities = 65/75 (86%), Positives = 73/75 (97%)
Frame = +2
Query: 38 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 217
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 218 HVPRAVFVDLEPMLL 262
HVPRAVFVDLEP ++
Sbjct: 61 HVPRAVFVDLEPTVI 75
Score = 136 bits (330), Expect = 1e-32
Identities = 64/86 (74%), Positives = 71/86 (82%)
Frame = +1
Query: 256 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQ 435
V+DEVRTG YRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIRKLAD CTGLQ
Sbjct: 74 VIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQ 133
Query: 436 GFLIFHXXXXXXXXXXXXLLMERLSL 513
GFL+F+ LL+ERLS+
Sbjct: 134 GFLVFNAVGGGTGSGLGSLLLERLSV 159
Score = 109 bits (262), Expect = 2e-24
Identities = 47/62 (75%), Positives = 57/62 (91%)
Frame = +3
Query: 510 VDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD 689
VDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LD
Sbjct: 159 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLD 218
Query: 690 IE 695
IE
Sbjct: 219 IE 220
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 155 bits (377), Expect = 2e-38
Identities = 63/75 (84%), Positives = 73/75 (97%)
Frame = +2
Query: 38 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 217
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQ DGQMP+D+T+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSDRTVGGGDDAFNTFFSETGAGK 60
Query: 218 HVPRAVFVDLEPMLL 262
HVPRAVFVDLEP ++
Sbjct: 61 HVPRAVFVDLEPTVI 75
Score = 136 bits (329), Expect = 2e-32
Identities = 64/86 (74%), Positives = 70/86 (81%)
Frame = +1
Query: 256 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQ 435
V+DEVRTG YRQLFHPEQLI GKEDAANN+ARGHYTIGKEIVDL LDRIRKLAD CTGLQ
Sbjct: 74 VIDEVRTGCYRQLFHPEQLINGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQ 133
Query: 436 GFLIFHXXXXXXXXXXXXLLMERLSL 513
GFL+F+ LL+ERLS+
Sbjct: 134 GFLVFNAVGGGTGSGLGSLLLERLSV 159
Score = 109 bits (262), Expect = 2e-24
Identities = 47/62 (75%), Positives = 57/62 (91%)
Frame = +3
Query: 510 VDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD 689
VDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LD
Sbjct: 159 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLD 218
Query: 690 IE 695
IE
Sbjct: 219 IE 220
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 140 bits (340), Expect = 7e-34
Identities = 57/75 (76%), Positives = 68/75 (90%)
Frame = +2
Query: 38 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 217
MRE IS+H+GQAG+Q+GNACWELYCLEHGI+PDG MP+D T+G D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 218 HVPRAVFVDLEPMLL 262
HVPRA+FVDLEP ++
Sbjct: 61 HVPRAIFVDLEPTVI 75
Score = 136 bits (330), Expect = 1e-32
Identities = 62/86 (72%), Positives = 72/86 (83%)
Frame = +1
Query: 256 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQ 435
V+DEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVDL LDR+RKLAD CTGLQ
Sbjct: 74 VIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQ 133
Query: 436 GFLIFHXXXXXXXXXXXXLLMERLSL 513
GFL+F+ LL+ERLS+
Sbjct: 134 GFLVFNAVGGGTGSGLGSLLLERLSV 159
Score = 111 bits (266), Expect = 7e-25
Identities = 49/62 (79%), Positives = 57/62 (91%)
Frame = +3
Query: 510 VDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD 689
VDYGKKSKL F IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LD
Sbjct: 159 VDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLD 218
Query: 690 IE 695
IE
Sbjct: 219 IE 220
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 130 bits (313), Expect = 1e-30
Identities = 59/90 (65%), Positives = 71/90 (78%)
Frame = +1
Query: 256 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQ 435
V+DEV+TG YRQLFHPEQLI+ KEDAANN+ARGHYT+G+E+VDL LDR+RKLAD CTGLQ
Sbjct: 134 VIDEVKTGPYRQLFHPEQLISYKEDAANNFARGHYTVGREVVDLCLDRLRKLADNCTGLQ 193
Query: 436 GFLIFHXXXXXXXXXXXXLLMERLSLTTAR 525
GFL+F+ LL+ERLS+ R
Sbjct: 194 GFLVFNAVGGGTGSGLGSLLLERLSVDYGR 223
Score = 85.4 bits (202), Expect = 4e-17
Identities = 44/83 (53%), Positives = 56/83 (67%), Gaps = 21/83 (25%)
Frame = +3
Query: 510 VDYGKKSKLEFAIYPAPQ---------------------VSTAVVEPYNSILTTHTTLEH 626
VDYG+KSKL F IYP+PQ +STAVVEPYNS+L+TH+ +EH
Sbjct: 219 VDYGRKSKLGFTIYPSPQYFFMSSSCMHIMSDTQISQCKISTAVVEPYNSVLSTHSLIEH 278
Query: 627 SDCAFMVDNEAIYDICRRNLDIE 695
+D ++DNEAIYDIC+R+LDIE
Sbjct: 279 TDVVVLLDNEAIYDICKRSLDIE 301
Score = 81.4 bits (192), Expect = 6e-16
Identities = 31/39 (79%), Positives = 36/39 (92%)
Frame = +2
Query: 38 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTD 154
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP D
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPRD 39
Score = 57.6 bits (133), Expect = 9e-09
Identities = 25/38 (65%), Positives = 31/38 (81%)
Frame = +2
Query: 149 TDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPMLL 262
+D T G D+FNTFFSET +GKHVPRA+FVDLEP ++
Sbjct: 98 SDTTPGIARDAFNTFFSETSSGKHVPRALFVDLEPTVI 135
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 79.4 bits (187), Expect = 3e-15
Identities = 35/83 (42%), Positives = 50/83 (60%)
Frame = +1
Query: 259 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQG 438
+D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C LQG
Sbjct: 253 MDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQG 312
Query: 439 FLIFHXXXXXXXXXXXXLLMERL 507
F + H LL+ ++
Sbjct: 313 FQVCHSLGGGTGSGMGTLLISKI 335
Score = 68.5 bits (160), Expect = 5e-12
Identities = 33/78 (42%), Positives = 46/78 (58%)
Frame = +2
Query: 20 KKTQIKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFS 199
KK + KMRE + + GQ G QIG+ WE+ C EHGI P G+ + + N +++
Sbjct: 175 KKGEEKMREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDL--QLERVNVYYN 232
Query: 200 ETGAGKHVPRAVFVDLEP 253
E G+ VPRAV +DLEP
Sbjct: 233 EASCGRFVPRAVLMDLEP 250
Score = 67.3 bits (157), Expect = 1e-11
Identities = 27/60 (45%), Positives = 43/60 (71%)
Frame = +3
Query: 513 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI 692
+Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L +
Sbjct: 338 EYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL 397
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 79.4 bits (187), Expect = 3e-15
Identities = 35/83 (42%), Positives = 50/83 (60%)
Frame = +1
Query: 259 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQG 438
+D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C LQG
Sbjct: 73 MDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQG 132
Query: 439 FLIFHXXXXXXXXXXXXLLMERL 507
F + H LL+ ++
Sbjct: 133 FQVCHSLGGGTGSGMGTLLISKI 155
Score = 67.3 bits (157), Expect = 1e-11
Identities = 27/60 (45%), Positives = 43/60 (71%)
Frame = +3
Query: 513 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI 692
+Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L +
Sbjct: 158 EYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL 217
Score = 64.1 bits (149), Expect = 1e-10
Identities = 32/75 (42%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Frame = +2
Query: 38 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGD---DSFNTFFSETG 208
MRE + + GQ G QIG+ WE+ C EHGI P G + +G D + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTG-----RYVGTSDLQLERVNVYYNEAS 55
Query: 209 AGKHVPRAVFVDLEP 253
G+ VPRAV +DLEP
Sbjct: 56 CGRFVPRAVLMDLEP 70
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 77.8 bits (183), Expect = 8e-15
Identities = 34/83 (40%), Positives = 50/83 (60%)
Frame = +1
Query: 259 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQG 438
+D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C LQG
Sbjct: 73 MDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQG 132
Query: 439 FLIFHXXXXXXXXXXXXLLMERL 507
F + H LL+ ++
Sbjct: 133 FQVCHSLGGGTGSGMGTLLISKI 155
Score = 67.3 bits (157), Expect = 1e-11
Identities = 27/60 (45%), Positives = 43/60 (71%)
Frame = +3
Query: 513 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI 692
+Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L +
Sbjct: 158 EYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL 217
Score = 63.3 bits (147), Expect = 2e-10
Identities = 30/72 (41%), Positives = 42/72 (58%)
Frame = +2
Query: 38 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 217
MRE + + GQ G QIG WE+ C EHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDL--QLERINVYYNEASGGR 58
Query: 218 HVPRAVFVDLEP 253
+VPRAV +DLEP
Sbjct: 59 YVPRAVLMDLEP 70
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 76.2 bits (179), Expect = 2e-14
Identities = 33/83 (39%), Positives = 50/83 (60%)
Frame = +1
Query: 259 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQG 438
+D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C LQG
Sbjct: 73 MDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQG 132
Query: 439 FLIFHXXXXXXXXXXXXLLMERL 507
F + H LL+ ++
Sbjct: 133 FQVCHSLGGGTGSGMGTLLISKI 155
Score = 67.3 bits (157), Expect = 1e-11
Identities = 27/60 (45%), Positives = 43/60 (71%)
Frame = +3
Query: 513 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI 692
+Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L +
Sbjct: 158 EYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL 217
Score = 63.3 bits (147), Expect = 2e-10
Identities = 29/72 (40%), Positives = 42/72 (58%)
Frame = +2
Query: 38 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 217
MRE + + GQ G QIG WE+ C EHG+ G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDL--QLERINVYYNEASGGR 58
Query: 218 HVPRAVFVDLEP 253
+VPRAV +DLEP
Sbjct: 59 YVPRAVLMDLEP 70
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 76.2 bits (179), Expect = 2e-14
Identities = 33/83 (39%), Positives = 49/83 (59%)
Frame = +1
Query: 259 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQG 438
+D VR+G Y +F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C LQG
Sbjct: 73 MDSVRSGPYGHIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQG 132
Query: 439 FLIFHXXXXXXXXXXXXLLMERL 507
F + H LL+ ++
Sbjct: 133 FQVCHSLGGGTGSGMGTLLISKI 155
Score = 67.3 bits (157), Expect = 1e-11
Identities = 27/60 (45%), Positives = 43/60 (71%)
Frame = +3
Query: 513 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI 692
+Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L +
Sbjct: 158 EYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL 217
Score = 63.3 bits (147), Expect = 2e-10
Identities = 30/72 (41%), Positives = 41/72 (56%)
Frame = +2
Query: 38 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 217
MRE + + GQ G QIG WE+ C EHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDL--QLERVNVYYNEASCGR 58
Query: 218 HVPRAVFVDLEP 253
VPRAV +DLEP
Sbjct: 59 FVPRAVLMDLEP 70
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 76.2 bits (179), Expect = 2e-14
Identities = 33/83 (39%), Positives = 50/83 (60%)
Frame = +1
Query: 259 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQG 438
+D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C LQG
Sbjct: 73 MDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQG 132
Query: 439 FLIFHXXXXXXXXXXXXLLMERL 507
F + H LL+ ++
Sbjct: 133 FQVCHSLGGGTGSGMGTLLISKI 155
Score = 67.3 bits (157), Expect = 1e-11
Identities = 27/60 (45%), Positives = 43/60 (71%)
Frame = +3
Query: 513 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI 692
+Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L +
Sbjct: 158 EYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL 217
Score = 62.1 bits (144), Expect = 4e-10
Identities = 30/72 (41%), Positives = 41/72 (56%)
Frame = +2
Query: 38 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 217
MRE + + GQ G QIG WE+ C EHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDL--QLERINVYYNEASGGR 58
Query: 218 HVPRAVFVDLEP 253
VPRAV +DLEP
Sbjct: 59 FVPRAVLMDLEP 70
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 73.7 bits (173), Expect = 1e-13
Identities = 31/60 (51%), Positives = 42/60 (70%)
Frame = +1
Query: 259 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQG 438
+D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C LQG
Sbjct: 73 MDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQG 132
Score = 67.3 bits (157), Expect = 1e-11
Identities = 27/60 (45%), Positives = 43/60 (71%)
Frame = +3
Query: 513 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI 692
+Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L +
Sbjct: 179 EYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL 238
Score = 63.3 bits (147), Expect = 2e-10
Identities = 30/72 (41%), Positives = 42/72 (58%)
Frame = +2
Query: 38 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 217
MRE + + GQ G QIG WE+ C EHGI P G+ + + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDL--QLERVNVYYNEASCGR 58
Query: 218 HVPRAVFVDLEP 253
VPRAV +DLEP
Sbjct: 59 FVPRAVLMDLEP 70
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 67.3 bits (157), Expect = 1e-11
Identities = 27/60 (45%), Positives = 43/60 (71%)
Frame = +3
Query: 513 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI 692
+Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L +
Sbjct: 174 EYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL 233
Score = 66.1 bits (154), Expect = 3e-11
Identities = 32/72 (44%), Positives = 41/72 (56%)
Frame = +2
Query: 38 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 217
MRE + + GQ G QIG WE+ C EHG+ P G T + N +F+E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGTY--TGTSPQQLERINVYFNEASGGR 58
Query: 218 HVPRAVFVDLEP 253
HVPRAV +DLEP
Sbjct: 59 HVPRAVLMDLEP 70
Score = 62.5 bits (145), Expect = 3e-10
Identities = 26/59 (44%), Positives = 39/59 (66%)
Frame = +1
Query: 259 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQ 435
+D +R+G +F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C LQ
Sbjct: 73 MDSLRSGPIGGIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQ 131
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 65.7 bits (153), Expect = 3e-11
Identities = 33/74 (44%), Positives = 44/74 (59%)
Frame = +2
Query: 41 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 220
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF + +
Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGG--DRKDVFFYQADDQHY 60
Query: 221 VPRAVFVDLEPMLL 262
+PRA+ VDLEP ++
Sbjct: 61 IPRALLVDLEPRVI 74
Score = 46.0 bits (104), Expect = 3e-05
Identities = 24/87 (27%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Frame = +1
Query: 256 VVDEVRTGTYRQLFHPEQLITGKED--AANNYARGHYTIGKEIVDLVLDRIRKLADQCTG 429
V++ ++ YR L++ E + + A NN+A G++ G+++VD ++D I + AD
Sbjct: 73 VINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASGYHQ-GEQVVDDIMDMIDREADGSDS 131
Query: 430 LQGFLIFHXXXXXXXXXXXXLLMERLS 510
L+GF++ H L+E L+
Sbjct: 132 LEGFVLCHSIAGGTGSGMGSYLLETLN 158
Score = 41.1 bits (92), Expect = 8e-04
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +3
Query: 516 YGKKSKLEFAIYPAP-QVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI 692
Y KK ++++P + S VV+PYNS+LT ++DC ++DN A+ I L +
Sbjct: 161 YSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHL 220
>04_01_0383 +
5085697-5085724,5085816-5085927,5087249-5087285,
5087512-5087581,5087704-5087808,5088022-5088172,
5088257-5088339,5089152-5089372,5089465-5089501,
5089668-5089753
Length = 309
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -2
Query: 177 SSPPPMVLSVGIWPSGWMPCSR 112
S P P+ LS I SGW+PCSR
Sbjct: 147 SMPYPITLSAVISLSGWLPCSR 168
>01_01_0524 -
3845637-3845727,3845803-3845896,3846415-3846497,
3846587-3846737,3847113-3847217,3847351-3847420,
3847551-3847587,3848155-3848257,3848441-3848480
Length = 257
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -2
Query: 174 SPPPMVLSVGIWPSGWMPCSR 112
+P P+ LSV + SGW+PC+R
Sbjct: 149 NPYPVNLSVSVGLSGWLPCAR 169
>05_07_0299 -
29073900-29073984,29074125-29074158,29074269-29074351,
29074457-29074607,29074853-29074957,29075099-29075168,
29075374-29075410,29076732-29076843,29076956-29076983
Length = 234
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -2
Query: 171 PPPMVLSVGIWPSGWMPCSR 112
P P+ LS I SGW+PCSR
Sbjct: 149 PYPITLSAVISLSGWLPCSR 168
>10_03_0016 -
7099862-7099967,7100059-7100357,7101862-7102171,
7104402-7105054,7105266-7105554,7106549-7106634
Length = 580
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 294 VSSRTTYYW*GRCGQQLCPWSLHHWK 371
VS+RTTY +C Q CPW +H +K
Sbjct: 239 VSNRTTYKV--KCTQAGCPWRVHGYK 262
>08_01_0312 + 2764744-2767390,2767632-2767990
Length = 1001
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +3
Query: 138 ARCPQTRPSGVETILSTLSSARPE 209
+RCPQ RPS + +LS L ARP+
Sbjct: 969 SRCPQERPS-MREVLSMLQEARPK 991
>07_03_1027 -
23371826-23372006,23372110-23372171,23372595-23374335,
23374609-23374704,23374967-23375043,23376807-23377307
Length = 885
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = -1
Query: 523 LP*STRDAPSIRK*TQSRYLHRRSGRSGILADRYTGQRACGFCPK-PNLRFPF 368
LP + + + T + LH + RSG ADR+T C K P PF
Sbjct: 287 LPAALKSCAGLGLCTLAASLHALAIRSGSFADRFTANALLNLCIKLPGFHHPF 339
>12_02_0399 - 18600444-18600591,18600626-18601656
Length = 392
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 294 VSSRTTYYW*GRCGQQLCPWSLHHWK 371
+S+RTTY +C Q CPW +H +K
Sbjct: 240 ISNRTTYDV--KCTQAGCPWRVHGYK 263
>07_03_0483 - 18605176-18606118,18606353-18606482,18606609-18606738
Length = 400
Score = 28.3 bits (60), Expect = 6.2
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -1
Query: 367 QWCSDHGHSCWPHLP 323
++ S+HGHSCW +P
Sbjct: 26 RYISEHGHSCWSSVP 40
>02_05_1147 -
34447519-34448042,34448126-34449092,34449458-34449657,
34449867-34450051,34450130-34450228,34450316-34450357,
34450516-34450860,34450956-34451101,34451213-34451296,
34451424-34451502,34451596-34451675,34451824-34451875,
34451992-34452026
Length = 945
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +3
Query: 81 RSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPE 209
++ M A T+ S +S P + PSGV L + SSA PE
Sbjct: 690 QTAMAASQATSISRGASQPLAVPNSMPSGVNFPLQSSSSAPPE 732
>01_05_0685 +
24273331-24273569,24275429-24275465,24275739-24275808,
24275978-24276082,24276205-24276355,24276454-24276536,
24276619-24276712,24276796-24276883
Length = 288
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -2
Query: 165 PMVLSVGIWPSGWMPCSR 112
P+ LS I SGW+PCSR
Sbjct: 184 PVTLSAVIGLSGWLPCSR 201
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,745,018
Number of Sequences: 37544
Number of extensions: 493520
Number of successful extensions: 1702
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1693
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1780264028
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -