Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20579
(697 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 160 9e-40
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 160 9e-40
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 159 2e-39
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 159 2e-39
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 141 3e-34
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 141 3e-34
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 135 3e-32
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 80 2e-15
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 78 6e-15
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 78 6e-15
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 78 6e-15
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 76 2e-14
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 75 3e-14
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 75 3e-14
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 75 5e-14
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 71 7e-13
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 65 5e-11
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 65 5e-11
At3g57510.1 68416.m06402 endo-polygalacturonase (ADPG1) identica... 30 1.7
At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR016... 29 2.2
At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid t... 29 2.9
At4g14510.1 68417.m02236 expressed protein contains Pfam domain,... 29 2.9
At1g52160.1 68414.m05887 metallo-beta-lactamase family protein 29 2.9
At3g11200.2 68416.m01359 PHD finger family protein contains Pfam... 28 6.8
At2g20300.1 68415.m02371 protein kinase family protein contains ... 28 6.8
At5g14420.4 68418.m01687 copine-related low similarity to SP|Q99... 27 9.0
At5g14420.3 68418.m01686 copine-related low similarity to SP|Q99... 27 9.0
At5g14420.2 68418.m01685 copine-related low similarity to SP|Q99... 27 9.0
At5g14420.1 68418.m01684 copine-related low similarity to SP|Q99... 27 9.0
At4g33990.1 68417.m04823 pentatricopeptide (PPR) repeat-containi... 27 9.0
At4g10440.1 68417.m01716 dehydration-responsive family protein s... 27 9.0
At3g01770.1 68416.m00116 DNA-binding bromodomain-containing prot... 27 9.0
At1g33170.1 68414.m04096 dehydration-responsive family protein s... 27 9.0
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 160 bits (388), Expect = 9e-40
Identities = 65/75 (86%), Positives = 74/75 (98%)
Frame = +2
Query: 38 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 217
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 218 HVPRAVFVDLEPMLL 262
HVPRAVFVDLEP ++
Sbjct: 61 HVPRAVFVDLEPTVI 75
Score = 139 bits (336), Expect = 2e-33
Identities = 65/86 (75%), Positives = 72/86 (83%)
Frame = +1
Query: 256 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQ 435
V+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIRKLAD CTGLQ
Sbjct: 74 VIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQ 133
Query: 436 GFLIFHXXXXXXXXXXXXLLMERLSL 513
GFL+F+ LL+ERLS+
Sbjct: 134 GFLVFNAVGGGTGSGLGSLLLERLSV 159
Score = 106 bits (254), Expect = 2e-23
Identities = 45/62 (72%), Positives = 56/62 (90%)
Frame = +3
Query: 510 VDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD 689
VDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNEAIYDICRR+L
Sbjct: 159 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLS 218
Query: 690 IE 695
IE
Sbjct: 219 IE 220
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 160 bits (388), Expect = 9e-40
Identities = 65/75 (86%), Positives = 74/75 (98%)
Frame = +2
Query: 38 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 217
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 218 HVPRAVFVDLEPMLL 262
HVPRAVFVDLEP ++
Sbjct: 61 HVPRAVFVDLEPTVI 75
Score = 139 bits (336), Expect = 2e-33
Identities = 65/86 (75%), Positives = 72/86 (83%)
Frame = +1
Query: 256 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQ 435
V+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIRKLAD CTGLQ
Sbjct: 74 VIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQ 133
Query: 436 GFLIFHXXXXXXXXXXXXLLMERLSL 513
GFL+F+ LL+ERLS+
Sbjct: 134 GFLVFNAVGGGTGSGLGSLLLERLSV 159
Score = 106 bits (254), Expect = 2e-23
Identities = 45/62 (72%), Positives = 56/62 (90%)
Frame = +3
Query: 510 VDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD 689
VDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNEAIYDICRR+L
Sbjct: 159 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLS 218
Query: 690 IE 695
IE
Sbjct: 219 IE 220
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 159 bits (385), Expect = 2e-39
Identities = 65/75 (86%), Positives = 73/75 (97%)
Frame = +2
Query: 38 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 217
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 218 HVPRAVFVDLEPMLL 262
HVPRAVFVDLEP ++
Sbjct: 61 HVPRAVFVDLEPTVI 75
Score = 139 bits (336), Expect = 2e-33
Identities = 65/86 (75%), Positives = 72/86 (83%)
Frame = +1
Query: 256 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQ 435
V+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIRKLAD CTGLQ
Sbjct: 74 VIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQ 133
Query: 436 GFLIFHXXXXXXXXXXXXLLMERLSL 513
GFL+F+ LL+ERLS+
Sbjct: 134 GFLVFNAVGGGTGSGLGSLLLERLSV 159
Score = 106 bits (255), Expect = 1e-23
Identities = 45/62 (72%), Positives = 57/62 (91%)
Frame = +3
Query: 510 VDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD 689
VDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNEAIYDICRR+L+
Sbjct: 159 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLN 218
Query: 690 IE 695
IE
Sbjct: 219 IE 220
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 159 bits (385), Expect = 2e-39
Identities = 65/75 (86%), Positives = 73/75 (97%)
Frame = +2
Query: 38 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 217
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 218 HVPRAVFVDLEPMLL 262
HVPRAVFVDLEP ++
Sbjct: 61 HVPRAVFVDLEPTVI 75
Score = 139 bits (336), Expect = 2e-33
Identities = 65/86 (75%), Positives = 72/86 (83%)
Frame = +1
Query: 256 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQ 435
V+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIRKLAD CTGLQ
Sbjct: 74 VIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQ 133
Query: 436 GFLIFHXXXXXXXXXXXXLLMERLSL 513
GFL+F+ LL+ERLS+
Sbjct: 134 GFLVFNAVGGGTGSGLGSLLLERLSV 159
Score = 106 bits (255), Expect = 1e-23
Identities = 45/62 (72%), Positives = 57/62 (91%)
Frame = +3
Query: 510 VDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD 689
VDYGKKSKL F +YP+PQVST+VVEPYNS+L+TH+ LEH+D + ++DNEAIYDICRR+L+
Sbjct: 159 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLN 218
Query: 690 IE 695
IE
Sbjct: 219 IE 220
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 141 bits (342), Expect = 3e-34
Identities = 58/75 (77%), Positives = 68/75 (90%)
Frame = +2
Query: 38 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 217
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 218 HVPRAVFVDLEPMLL 262
HVPRAVFVDLEP ++
Sbjct: 61 HVPRAVFVDLEPTVI 75
Score = 138 bits (334), Expect = 3e-33
Identities = 63/86 (73%), Positives = 72/86 (83%)
Frame = +1
Query: 256 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQ 435
V+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVDL LDR+RKLAD CTGLQ
Sbjct: 74 VIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQ 133
Query: 436 GFLIFHXXXXXXXXXXXXLLMERLSL 513
GFL+F+ LL+ERLS+
Sbjct: 134 GFLVFNAVGGGTGSGLGSLLLERLSV 159
Score = 111 bits (266), Expect = 6e-25
Identities = 49/62 (79%), Positives = 57/62 (91%)
Frame = +3
Query: 510 VDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD 689
VDYGKKSKL F IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LD
Sbjct: 159 VDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLD 218
Query: 690 IE 695
IE
Sbjct: 219 IE 220
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 141 bits (342), Expect = 3e-34
Identities = 58/75 (77%), Positives = 68/75 (90%)
Frame = +2
Query: 38 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 217
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 218 HVPRAVFVDLEPMLL 262
HVPRAVFVDLEP ++
Sbjct: 61 HVPRAVFVDLEPTVI 75
Score = 138 bits (334), Expect = 3e-33
Identities = 63/86 (73%), Positives = 72/86 (83%)
Frame = +1
Query: 256 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQ 435
V+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVDL LDR+RKLAD CTGLQ
Sbjct: 74 VIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQ 133
Query: 436 GFLIFHXXXXXXXXXXXXLLMERLSL 513
GFL+F+ LL+ERLS+
Sbjct: 134 GFLVFNAVGGGTGSGLGSLLLERLSV 159
Score = 111 bits (266), Expect = 6e-25
Identities = 49/62 (79%), Positives = 57/62 (91%)
Frame = +3
Query: 510 VDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD 689
VDYGKKSKL F IYP+PQVSTAVVEPYNS+L+TH+ LEH+D A ++DNEAIYDICRR+LD
Sbjct: 159 VDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLD 218
Query: 690 IE 695
IE
Sbjct: 219 IE 220
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 135 bits (326), Expect = 3e-32
Identities = 54/75 (72%), Positives = 67/75 (89%)
Frame = +2
Query: 38 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 217
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSET +G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 218 HVPRAVFVDLEPMLL 262
HVPRAVF+DLEP ++
Sbjct: 61 HVPRAVFLDLEPTVI 75
Score = 133 bits (321), Expect = 1e-31
Identities = 60/86 (69%), Positives = 71/86 (82%)
Frame = +1
Query: 256 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQ 435
V+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+G+EIVD L+R+RKLAD CTGLQ
Sbjct: 74 VIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLERLRKLADNCTGLQ 133
Query: 436 GFLIFHXXXXXXXXXXXXLLMERLSL 513
GFL+F+ LL+ERLS+
Sbjct: 134 GFLVFNAVGGGTGSGLGSLLLERLSV 159
Score = 107 bits (258), Expect = 5e-24
Identities = 47/62 (75%), Positives = 56/62 (90%)
Frame = +3
Query: 510 VDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD 689
VD+GKKSKL F IYP+PQVSTAVVEPYNS+L+TH+ LEH+D ++DNEAIYDICRR+LD
Sbjct: 159 VDFGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRRSLD 218
Query: 690 IE 695
IE
Sbjct: 219 IE 220
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 79.8 bits (188), Expect = 2e-15
Identities = 35/83 (42%), Positives = 50/83 (60%)
Frame = +1
Query: 259 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQG 438
+D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C LQG
Sbjct: 73 MDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQG 132
Query: 439 FLIFHXXXXXXXXXXXXLLMERL 507
F + H LL+ ++
Sbjct: 133 FQVCHSLGGGTGSGMGTLLISKI 155
Score = 67.3 bits (157), Expect = 9e-12
Identities = 27/60 (45%), Positives = 43/60 (71%)
Frame = +3
Query: 513 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI 692
+Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L +
Sbjct: 158 EYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL 217
Score = 65.7 bits (153), Expect = 3e-11
Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Frame = +2
Query: 38 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGD---DSFNTFFSETG 208
MRE + + GQ G QIG+ WE+ C EHGI P G + +G D + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTG-----RYVGNSDLQLERVNVYYNEAS 55
Query: 209 AGKHVPRAVFVDLEP 253
G++VPRA+ +DLEP
Sbjct: 56 CGRYVPRAILMDLEP 70
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 77.8 bits (183), Expect = 6e-15
Identities = 34/83 (40%), Positives = 50/83 (60%)
Frame = +1
Query: 259 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQG 438
+D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C LQG
Sbjct: 73 MDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQG 132
Query: 439 FLIFHXXXXXXXXXXXXLLMERL 507
F + H LL+ ++
Sbjct: 133 FQVCHSLGGGTGSGMGTLLISKI 155
Score = 67.3 bits (157), Expect = 9e-12
Identities = 27/60 (45%), Positives = 43/60 (71%)
Frame = +3
Query: 513 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI 692
+Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L +
Sbjct: 158 EYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL 217
Score = 61.7 bits (143), Expect = 5e-10
Identities = 29/72 (40%), Positives = 41/72 (56%)
Frame = +2
Query: 38 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 217
MRE + + GQ G QIG WE+ C EHGI G+ + + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDL--QLERVNVYYNEASCGR 58
Query: 218 HVPRAVFVDLEP 253
VPRAV +DLEP
Sbjct: 59 FVPRAVLMDLEP 70
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 77.8 bits (183), Expect = 6e-15
Identities = 34/83 (40%), Positives = 50/83 (60%)
Frame = +1
Query: 259 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQG 438
+D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C LQG
Sbjct: 73 MDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQG 132
Query: 439 FLIFHXXXXXXXXXXXXLLMERL 507
F + H LL+ ++
Sbjct: 133 FQVCHSLGGGTGSGMGTLLISKI 155
Score = 66.5 bits (155), Expect = 2e-11
Identities = 26/60 (43%), Positives = 43/60 (71%)
Frame = +3
Query: 513 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI 692
+Y + + F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L +
Sbjct: 158 EYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL 217
Score = 62.5 bits (145), Expect = 3e-10
Identities = 30/72 (41%), Positives = 43/72 (59%)
Frame = +2
Query: 38 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 217
MRE + + GQ G QIG+ WE+ LEHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSEL--QLERVNVYYNEASCGR 58
Query: 218 HVPRAVFVDLEP 253
+VPRAV +DLEP
Sbjct: 59 YVPRAVLMDLEP 70
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 77.8 bits (183), Expect = 6e-15
Identities = 33/83 (39%), Positives = 50/83 (60%)
Frame = +1
Query: 259 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQG 438
+D +R+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C LQG
Sbjct: 74 MDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQG 133
Query: 439 FLIFHXXXXXXXXXXXXLLMERL 507
F + H LL+ ++
Sbjct: 134 FQVCHSLGGGTGSGMGTLLISKI 156
Score = 67.3 bits (157), Expect = 9e-12
Identities = 27/60 (45%), Positives = 43/60 (71%)
Frame = +3
Query: 513 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI 692
+Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L +
Sbjct: 159 EYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL 218
Score = 66.1 bits (154), Expect = 2e-11
Identities = 31/72 (43%), Positives = 44/72 (61%)
Frame = +2
Query: 38 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 217
MRE + V GQ G QIG+ WE+ C EHG+ P G+ D + + N +++E G+
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGD-SADLQLERINVYYNEASGGR 59
Query: 218 HVPRAVFVDLEP 253
+VPRAV +DLEP
Sbjct: 60 YVPRAVLMDLEP 71
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 76.2 bits (179), Expect = 2e-14
Identities = 32/83 (38%), Positives = 50/83 (60%)
Frame = +1
Query: 259 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQG 438
+D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C LQG
Sbjct: 74 MDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQG 133
Query: 439 FLIFHXXXXXXXXXXXXLLMERL 507
F + H LL+ ++
Sbjct: 134 FQVCHSLGGGTGSGMGTLLISKI 156
Score = 67.3 bits (157), Expect = 9e-12
Identities = 27/60 (45%), Positives = 43/60 (71%)
Frame = +3
Query: 513 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI 692
+Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L +
Sbjct: 159 EYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL 218
Score = 64.9 bits (151), Expect = 5e-11
Identities = 31/72 (43%), Positives = 43/72 (59%)
Frame = +2
Query: 38 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 217
MRE + + GQ G QIG+ WE+ C EHGI G+ D T + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGD-TADLQLERINVYYNEASGGR 59
Query: 218 HVPRAVFVDLEP 253
+VPRAV +DLEP
Sbjct: 60 YVPRAVLMDLEP 71
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 75.4 bits (177), Expect = 3e-14
Identities = 33/83 (39%), Positives = 49/83 (59%)
Frame = +1
Query: 259 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQG 438
+D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C LQG
Sbjct: 73 MDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQG 132
Query: 439 FLIFHXXXXXXXXXXXXLLMERL 507
F + H LL+ ++
Sbjct: 133 FQVCHSLGGGTGSGMGTLLISKI 155
Score = 67.3 bits (157), Expect = 9e-12
Identities = 27/60 (45%), Positives = 43/60 (71%)
Frame = +3
Query: 513 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI 692
+Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L +
Sbjct: 158 EYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL 217
Score = 66.9 bits (156), Expect = 1e-11
Identities = 31/72 (43%), Positives = 42/72 (58%)
Frame = +2
Query: 38 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 217
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDL--QLERINVYYNEASCGR 58
Query: 218 HVPRAVFVDLEP 253
VPRAV +DLEP
Sbjct: 59 FVPRAVLMDLEP 70
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 75.4 bits (177), Expect = 3e-14
Identities = 33/83 (39%), Positives = 49/83 (59%)
Frame = +1
Query: 259 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQG 438
+D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C LQG
Sbjct: 73 MDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQG 132
Query: 439 FLIFHXXXXXXXXXXXXLLMERL 507
F + H LL+ ++
Sbjct: 133 FQVCHSLGGGTGSGMGTLLISKI 155
Score = 67.3 bits (157), Expect = 9e-12
Identities = 27/60 (45%), Positives = 43/60 (71%)
Frame = +3
Query: 513 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI 692
+Y + L F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L +
Sbjct: 158 EYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL 217
Score = 66.9 bits (156), Expect = 1e-11
Identities = 31/72 (43%), Positives = 42/72 (58%)
Frame = +2
Query: 38 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 217
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDL--QLERINVYYNEASCGR 58
Query: 218 HVPRAVFVDLEP 253
VPRAV +DLEP
Sbjct: 59 FVPRAVLMDLEP 70
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 74.9 bits (176), Expect = 5e-14
Identities = 32/83 (38%), Positives = 50/83 (60%)
Frame = +1
Query: 259 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQG 438
+D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C LQG
Sbjct: 73 MDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQG 132
Query: 439 FLIFHXXXXXXXXXXXXLLMERL 507
F + H LL+ ++
Sbjct: 133 FQVCHSLGGGTGSGMGTLLISKI 155
Score = 66.5 bits (155), Expect = 2e-11
Identities = 33/72 (45%), Positives = 42/72 (58%)
Frame = +2
Query: 38 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 217
MRE + + GQ G QIG WE+ C EHGI GQ D + + N +F+E GK
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDL--QLERINVYFNEASGGK 58
Query: 218 HVPRAVFVDLEP 253
+VPRAV +DLEP
Sbjct: 59 YVPRAVLMDLEP 70
Score = 66.5 bits (155), Expect = 2e-11
Identities = 26/60 (43%), Positives = 43/60 (71%)
Frame = +3
Query: 513 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI 692
+Y + + F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L +
Sbjct: 158 EYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL 217
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 70.9 bits (166), Expect = 7e-13
Identities = 31/83 (37%), Positives = 49/83 (59%)
Frame = +1
Query: 259 VDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQG 438
+D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ LQG
Sbjct: 73 MDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENSDCLQG 132
Query: 439 FLIFHXXXXXXXXXXXXLLMERL 507
F + H LL+ ++
Sbjct: 133 FQVCHSLGGGTGSGMGTLLISKI 155
Score = 66.5 bits (155), Expect = 2e-11
Identities = 26/60 (43%), Positives = 43/60 (71%)
Frame = +3
Query: 513 DYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI 692
+Y + + F+++P+P+VS VVEPYN+ L+ H +E++D ++DNEA+YDIC R L +
Sbjct: 158 EYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL 217
Score = 64.9 bits (151), Expect = 5e-11
Identities = 32/72 (44%), Positives = 42/72 (58%)
Frame = +2
Query: 38 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 217
MRE + + GQ G QIG WE+ C EHGI GQ D + + + +F+E GK
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPL--QLERIDVYFNEASGGK 58
Query: 218 HVPRAVFVDLEP 253
+VPRAV +DLEP
Sbjct: 59 YVPRAVLMDLEP 70
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 64.9 bits (151), Expect = 5e-11
Identities = 32/74 (43%), Positives = 44/74 (59%)
Frame = +2
Query: 41 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 220
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF + +
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHY 60
Query: 221 VPRAVFVDLEPMLL 262
+PRA+ +DLEP ++
Sbjct: 61 IPRALLIDLEPRVI 74
Score = 41.1 bits (92), Expect = 7e-04
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +3
Query: 516 YGKKSKLEFAIYPAP-QVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI 692
Y KK ++++P + S VV+PYNS+LT ++DC ++DN A+ I L +
Sbjct: 161 YSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHL 220
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 64.9 bits (151), Expect = 5e-11
Identities = 32/74 (43%), Positives = 44/74 (59%)
Frame = +2
Query: 41 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 220
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF + +
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHY 60
Query: 221 VPRAVFVDLEPMLL 262
+PRA+ +DLEP ++
Sbjct: 61 IPRALLIDLEPRVI 74
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +3
Query: 516 YGKKSKLEFAIYPAP-QVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDI 692
Y KK ++++P + S VV+PYNS+LT ++DC ++DN A+ I L +
Sbjct: 161 YSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALGRIAVERLHL 220
>At3g57510.1 68416.m06402 endo-polygalacturonase (ADPG1) identical
to endo-polygalacturonase [Arabidopsis thaliana]
GI:2597824
Length = 431
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = -3
Query: 692 NVEITA---ADVIDGFIVDHESTVRVLKGCVGGEDRVVGLDDGSGNLR 558
NVEITA + DG + + +RV +G D + ++DG+ NL+
Sbjct: 230 NVEITAPGDSPNTDGIHITNTQNIRVSNSDIGTGDDCISIEDGTQNLQ 277
>At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR01612:
reticulocyte binding protein; similar to Myosin heavy
chain, non-muscle (Zipper protein) (Myosin II)
(SP:Q99323) {Drosophila melanogaster} similar to EST
gb|T76116
Length = 1730
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -2
Query: 474 AGTSTEGVEDQESLQTGTLVSELADSVQNQIYD 376
+G TEGVED S LV D ++ QI D
Sbjct: 609 SGLMTEGVEDHTSSDINLLVDRSFDKIEKQIRD 641
>At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to lipid
transfer protein - Hordeum vulgare, EMBL:AF109195;
contains Pfam protease inhibitor/seed storage/LTP family
domain PF00234
Length = 158
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = -2
Query: 207 PVSLKKVLKESSPPPMVLSVGIWPSGWMPCSRQ*SSQQALPI 82
PVS L +SPP +W SGW P +PI
Sbjct: 101 PVSACDSLPPASPPTANGQAPVWGSGWAPAPSPSKGNSLIPI 142
>At4g14510.1 68417.m02236 expressed protein contains Pfam domain,
PF04581: Protein of unknown function (DUF578)
Length = 932
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +2
Query: 116 EHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLE 250
E GIQ +G + ++ + G D +T F + A P FV+L+
Sbjct: 881 EGGIQANGSL-SETDVEFGSDESDTDFGDNSASSTTPETTFVELQ 924
>At1g52160.1 68414.m05887 metallo-beta-lactamase family protein
Length = 890
Score = 29.1 bits (62), Expect = 2.9
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Frame = -1
Query: 244 IDEDSTGYVLASSGLAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGITD---LDS 74
+ E G+ + SG + E + ++ D + H A DA+++ T +D
Sbjct: 748 VGEQILGWKMVYSGDSRPCPETVEASRDATILIHEATFEDALIEEALAKNHSTTKEAIDV 807
Query: 73 G-LANVYRDALTHF 35
G ANVYR LTHF
Sbjct: 808 GSAANVYRIVLTHF 821
>At3g11200.2 68416.m01359 PHD finger family protein contains Pfam
domain, PF00628: PHD-finger
Length = 233
Score = 27.9 bits (59), Expect = 6.8
Identities = 17/65 (26%), Positives = 29/65 (44%)
Frame = +3
Query: 453 LLRWRYRLWVHFLIDGASLVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSD 632
LLR+ + WV +I+ +L YG ++ PA +V + EP I ++ D
Sbjct: 18 LLRFDFNFWVFVVIEKENLCLYGHPNESWEVNLPAEEVPPELPEPALGINFARDGMQRKD 77
Query: 633 CAFMV 647
+V
Sbjct: 78 WLSLV 82
>At2g20300.1 68415.m02371 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 744
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -1
Query: 271 GPHQQHRFKIDEDSTGYVLASSGLAEESVERIVSTPDGLVCG 146
G H+ R+ + ++T +S + VE + STP G CG
Sbjct: 75 GHHRHRRWHLRRNATAVSPSSHDCQQTCVEPLTSTPFGSPCG 116
>At5g14420.4 68418.m01687 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 27.5 bits (58), Expect = 9.0
Identities = 22/71 (30%), Positives = 33/71 (46%)
Frame = -1
Query: 244 IDEDSTGYVLASSGLAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGITDLDSGLA 65
I E S G +A+ V R V T +G + +DA++QA KLP I + G+
Sbjct: 236 IVEQSGGQYHVLVIIADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSIVLV--GVG 293
Query: 64 NVYRDALTHFD 32
+ D + FD
Sbjct: 294 DGPWDMMREFD 304
>At5g14420.3 68418.m01686 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 27.5 bits (58), Expect = 9.0
Identities = 22/71 (30%), Positives = 33/71 (46%)
Frame = -1
Query: 244 IDEDSTGYVLASSGLAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGITDLDSGLA 65
I E S G +A+ V R V T +G + +DA++QA KLP I + G+
Sbjct: 236 IVEQSGGQYHVLVIIADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSIVLV--GVG 293
Query: 64 NVYRDALTHFD 32
+ D + FD
Sbjct: 294 DGPWDMMREFD 304
>At5g14420.2 68418.m01685 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 27.5 bits (58), Expect = 9.0
Identities = 22/71 (30%), Positives = 33/71 (46%)
Frame = -1
Query: 244 IDEDSTGYVLASSGLAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGITDLDSGLA 65
I E S G +A+ V R V T +G + +DA++QA KLP I + G+
Sbjct: 236 IVEQSGGQYHVLVIIADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSIVLV--GVG 293
Query: 64 NVYRDALTHFD 32
+ D + FD
Sbjct: 294 DGPWDMMREFD 304
>At5g14420.1 68418.m01684 copine-related low similarity to SP|Q99829
Copine I {Homo sapiens}
Length = 468
Score = 27.5 bits (58), Expect = 9.0
Identities = 22/71 (30%), Positives = 33/71 (46%)
Frame = -1
Query: 244 IDEDSTGYVLASSGLAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGITDLDSGLA 65
I E S G +A+ V R V T +G + +DA++QA KLP I + G+
Sbjct: 236 IVEQSGGQYHVLVIIADGQVTRSVDTENGQLSPQEQKTVDAIVQASKLPLSIVLV--GVG 293
Query: 64 NVYRDALTHFD 32
+ D + FD
Sbjct: 294 DGPWDMMREFD 304
>At4g33990.1 68417.m04823 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 823
Score = 27.5 bits (58), Expect = 9.0
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +3
Query: 504 SLVD-YGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAI 662
SL D YGK +LE A+ Q+ P+N+++ H H + A M+ E +
Sbjct: 491 SLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEML 544
>At4g10440.1 68417.m01716 dehydration-responsive family protein
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 633
Score = 27.5 bits (58), Expect = 9.0
Identities = 8/30 (26%), Positives = 17/30 (56%)
Frame = -1
Query: 406 CGFCPKPNLRFPFQWCSDHGHSCWPHLPYQ 317
C P PN + PF+W ++ + ++P++
Sbjct: 136 CLIPPPPNYKIPFKWPQSRDYAWYDNIPHK 165
>At3g01770.1 68416.m00116 DNA-binding bromodomain-containing protein
contains bromodomain, INTERPRO:IPR001487
Length = 620
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -3
Query: 650 VDHESTVRVLKGCVGGEDRVVGLDDGSGNLRRGVDG 543
+ H STVR K VGG +++ G +L G DG
Sbjct: 394 ISHISTVRTEKDSVGGLNQMEDASRGKLSLIEGADG 429
>At1g33170.1 68414.m04096 dehydration-responsive family protein
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 639
Score = 27.5 bits (58), Expect = 9.0
Identities = 8/30 (26%), Positives = 17/30 (56%)
Frame = -1
Query: 406 CGFCPKPNLRFPFQWCSDHGHSCWPHLPYQ 317
C P PN + PF+W ++ + ++P++
Sbjct: 153 CLIPPPPNYKIPFKWPQSRDYAWYDNIPHK 182
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,894,900
Number of Sequences: 28952
Number of extensions: 357380
Number of successful extensions: 1202
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1191
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1487069504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -