Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20577
(465 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 85 7e-18
SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr 2... 40 2e-04
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 39 3e-04
SPAC823.10c |||mitochondrial carrier with solute carrier repeats... 38 6e-04
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 38 0.001
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 33 0.021
SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces p... 32 0.037
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 32 0.050
SPBC29A3.11c |||mitochondrial carboxylic acid transporter|Schizo... 32 0.050
SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|ch... 31 0.11
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 31 0.11
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 29 0.26
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 29 0.26
SPAC2F7.08c |snf5||chromatin remodeling complex subunit Snf5 |Sc... 29 0.46
SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr... 28 0.61
SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharo... 27 1.9
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 26 2.5
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 26 3.3
SPCC31H12.07 |sec231|sec23a, SPCC5E4.01|GTPase activating protei... 25 5.7
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 25 5.7
SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces p... 25 7.5
SPBC19C2.09 |sre1||sterol regulatory element binding protein Sre... 25 7.5
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 25 7.5
SPAC1002.05c |jmj2||histone demethylase Jmj2 |Schizosaccharomyce... 24 9.9
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 84.6 bits (200), Expect = 7e-18
Identities = 39/77 (50%), Positives = 53/77 (68%)
Frame = +2
Query: 233 LCSLRSWRVLSCGLTNTAVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWA 412
LC+L +L+CG T++A+ PLDL+KCR QV+ Y + GFK + +EG+RGL G
Sbjct: 25 LCTLGG--LLACGTTHSAITPLDLIKCRKQVNPNIYPGNIAGFKTILSKEGLRGLYTGGM 82
Query: 413 PTFIGYSMQGLCKFGFY 463
PT IGYS+QG K+GFY
Sbjct: 83 PTLIGYSLQGCGKYGFY 99
>SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 277
Score = 39.5 bits (88), Expect = 2e-04
Identities = 27/77 (35%), Positives = 38/77 (49%)
Frame = +2
Query: 233 LCSLRSWRVLSCGLTNTAVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWA 412
LCS + LTN P+ +VK R+ Y N GF ++ EG+RG G+A
Sbjct: 102 LCSSGFAGCIVAALTN----PIWVVKSRILSKRVNYTNPFFGFYDLIKNEGLRGCYAGFA 157
Query: 413 PTFIGYSMQGLCKFGFY 463
P+ +G S QG +F Y
Sbjct: 158 PSLLGVS-QGALQFMAY 173
Score = 29.5 bits (63), Expect = 0.26
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = +2
Query: 293 PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFY 463
PL +++ RLQV +++++N + R +G+ G KG+ P + Q F Y
Sbjct: 206 PLLVIRTRLQVMRSPHRSIMNLVLQTWRLQGILGFYKGFLPHLLRVVPQTCITFLVY 262
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 39.1 bits (87), Expect = 3e-04
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 9/76 (11%)
Frame = +2
Query: 263 SCGLTNTAVVPLDLVKCRLQV-------DAEK--YKNVVNGFKVSVREEGVRGLAKGWAP 415
+CG T P +++K R Q+ D K YK+V F + R EG+RGL +G
Sbjct: 34 ACGAV-TLTNPFEVIKTRFQLQGQLTKLDPSKRIYKSVGQAFSLIARHEGIRGLQRGLGT 92
Query: 416 TFIGYSMQGLCKFGFY 463
++ C+ GFY
Sbjct: 93 AYVYQICLNGCRLGFY 108
Score = 27.9 bits (59), Expect = 0.81
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 8/46 (17%)
Frame = +2
Query: 293 PLDLVKCRLQVDAEK--------YKNVVNGFKVSVREEGVRGLAKG 406
P LVK R+Q + K YK++ N F ++E GV+GL G
Sbjct: 148 PFFLVKTRMQSYSPKFPVGQQYGYKHIFNAFSRIIKENGVKGLFVG 193
Score = 24.2 bits (50), Expect = 9.9
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +2
Query: 299 DLVKCRL--QVDAEKYKNVVNGFKVSVREEGVRGLAKGW 409
D V R+ Q + E YKN ++ ++R EG L KG+
Sbjct: 251 DTVMTRMYNQKNKELYKNPIDCILKTIRSEGFFALYKGF 289
>SPAC823.10c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 38.3 bits (85), Expect = 6e-04
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +2
Query: 260 LSCGLTNTAVV-PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGW 409
L G T TA+ P D++K R+Q++ YKN ++ K+ EG RG G+
Sbjct: 218 LISGATATAITNPFDMLKTRVQLEPHIYKNFLHSAKLVYANEGFRGFLDGF 268
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 37.5 bits (83), Expect = 0.001
Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 5/57 (8%)
Frame = +2
Query: 272 LTNTAVVPLDLVKCRLQVD-----AEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIG 427
+T+ A P+ LVK RLQ+D A +Y++ ++ ++R EG RGL KG + + +G
Sbjct: 175 ITSAATNPIWLVKTRLQLDKKSGQAAQYRSSIDCIIKTIRLEGFRGLYKGLSASLLG 231
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 33.1 bits (72), Expect = 0.021
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 8/67 (11%)
Frame = +2
Query: 287 VVPLDLVKCRLQVDAE--------KYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQG 442
V LD + RL DA+ ++ +V+ ++ + R +G+RGL +G+ P+ +G +
Sbjct: 150 VYSLDYARTRLANDAKSAKKGGERQFNGLVDVYRKTYRSDGLRGLYRGFGPSVVGIVVYR 209
Query: 443 LCKFGFY 463
FG Y
Sbjct: 210 GLYFGMY 216
Score = 28.3 bits (60), Expect = 0.61
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 9/76 (11%)
Frame = +2
Query: 260 LSCGLTNTAVVPLDLVKCRLQVDAE---------KYKNVVNGFKVSVREEGVRGLAKGWA 412
+S ++ TA P++ VK +Q E +YK + FK + EEGV L +G
Sbjct: 36 VSAAVSKTAAAPIERVKLLIQNQDEMIRAGRLSHRYKGIGECFKRTAAEEGVISLWRGNT 95
Query: 413 PTFIGYSMQGLCKFGF 460
+ Y F F
Sbjct: 96 ANVLRYFPTQALNFAF 111
>SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 258
Score = 32.3 bits (70), Expect = 0.037
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 260 LSCGLTNTAVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKG 406
LS +T + PLD++K ++ + E Y+ VV +E G+ G KG
Sbjct: 176 LSGAITAAVLTPLDVIKTQINLRPESYRKVVRRI---YKENGIFGFEKG 221
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 31.9 bits (69), Expect = 0.050
Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 12/68 (17%)
Frame = +2
Query: 263 SCGLTNTAVV-PLDLVKCRLQVDAEKY-----KN--VVNGFKVSVR----EEGVRGLAKG 406
+ GL ++ VV PLD+VK R Q Y KN V+ G S+R EG+ GL +G
Sbjct: 14 AAGLASSLVVAPLDVVKTRKQAQKAFYSTGGGKNTMVLGGTLSSMRTIFHNEGIAGLYRG 73
Query: 407 WAPTFIGY 430
P +GY
Sbjct: 74 VGPMMLGY 81
>SPBC29A3.11c |||mitochondrial carboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 31.9 bits (69), Expect = 0.050
Identities = 18/69 (26%), Positives = 34/69 (49%)
Frame = +2
Query: 257 VLSCGLTNTAVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSM 436
++S ++N PLD +K R Q + + + F+ +V+ EG++GL +G I ++
Sbjct: 25 LVSSAISNVIGYPLDSIKVRQQT--YNFPTIRSCFQNAVKNEGLKGLYRGLTLPLISATL 82
Query: 437 QGLCKFGFY 463
F Y
Sbjct: 83 SRSVSFTVY 91
>SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 271
Score = 30.7 bits (66), Expect = 0.11
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Frame = +2
Query: 266 CGLTNTAV-----VPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGW 409
CG+T V PL+++K R Q+ + +V+N R EG++G +G+
Sbjct: 89 CGMTAEVVSSFVWTPLEVIKARTQISQKG--SVINTISTLARSEGLKGFYRGY 139
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 30.7 bits (66), Expect = 0.11
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +2
Query: 263 SCGLT--NTAVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSM 436
+C +T + + P D++K R+Q+ + KYK+ ++ R EG+ + PT I S+
Sbjct: 121 ACAITISDAFMTPFDVIKQRMQLPSRKYKSALHCATTVFRNEGLGAFYISY-PTCIAMSI 179
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 29.5 bits (63), Expect = 0.26
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +2
Query: 293 PLDLVKCRLQVDAEK--YKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKF 454
PLD+VK R+Q+ K Y + K V+ EG L +G P + + + KF
Sbjct: 28 PLDVVKTRMQLSVGKSDYNGTFDCLKKIVKNEGPHRLYRGILPPILMEAPKRALKF 83
Score = 25.0 bits (52), Expect = 5.7
Identities = 15/47 (31%), Positives = 19/47 (40%), Gaps = 6/47 (12%)
Frame = +2
Query: 293 PLDLVKCRLQV------DAEKYKNVVNGFKVSVREEGVRGLAKGWAP 415
P D++K R+Q KY REEG L KG+ P
Sbjct: 219 PFDVIKSRIQTVPRIAGQVPKYNWAYPALVTVAREEGFTALYKGFVP 265
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 29.5 bits (63), Expect = 0.26
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
Frame = +2
Query: 284 AVVPLDLVKCRLQVDA----EKYKNVVNGFKVSVREEGVRGLAKGWAPTFI 424
A P D+VK ++Q D YKN K + G+RG +G+ P +
Sbjct: 229 AAYPFDIVKSKIQTDGFLSKATYKNSWQCAKGIYTKAGLRGFYRGFVPVLV 279
>SPAC2F7.08c |snf5||chromatin remodeling complex subunit Snf5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 632
Score = 28.7 bits (61), Expect = 0.46
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = +2
Query: 290 VPLDLVKCRLQVDAEKYK 343
+P+DLV RL++DA++YK
Sbjct: 137 LPVDLVPIRLEIDADRYK 154
>SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1275
Score = 28.3 bits (60), Expect = 0.61
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Frame = -1
Query: 444 RPCIEYPMKVGA---HPLARPRTPSSRTDTLKPFTT 346
RP E P+ G HPL RP PSS + P++T
Sbjct: 154 RPLPETPVSPGGSLVHPLPRPPLPSSVSSHSSPYST 189
>SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1388
Score = 26.6 bits (56), Expect = 1.9
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = +2
Query: 353 NGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGF 460
+ F++ + V G + W P + G+CK GF
Sbjct: 1105 SNFQIPMHVRSVHGWSCQWGPREDSMLLSGICKHGF 1140
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 26.2 bits (55), Expect = 2.5
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 293 PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKG 406
P+D V LQ YK+ + F R G++GL +G
Sbjct: 212 PVDTVVKTLQTFPSNYKSFKDCFLSIYRNSGIKGLYRG 249
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 25.8 bits (54), Expect = 3.3
Identities = 13/53 (24%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Frame = +2
Query: 281 TAVVPLDLVKCRLQVD-----AEKYKNVVNGFKVSVREEGVRGLAKGWAPTFI 424
T P D+++ R QV+ YKN+ + + EG+ G +G++ +
Sbjct: 242 TLTFPADVLRRRFQVNRIPGIGHNYKNIKSAIFHIYKTEGINGFFRGYSSNML 294
>SPCC31H12.07 |sec231|sec23a, SPCC5E4.01|GTPase activating protein
Sec23a|Schizosaccharomyces pombe|chr 3|||Manual
Length = 759
Score = 25.0 bits (52), Expect = 5.7
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 5/32 (15%)
Frame = +3
Query: 138 STVAPVAIEQTGGMAASAA-----VPTESCEF 218
S V+PVA++Q SAA +P + CEF
Sbjct: 203 SNVSPVALQQARSFQGSAAPSRFLLPIQQCEF 234
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 25.0 bits (52), Expect = 5.7
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = -1
Query: 450 LQRPCIEYPMKVGAHPLARPRTPSSRTDTL 361
+ RP PM+ H L P+ PS++ L
Sbjct: 1024 IPRPLPNLPMEYNDHTLPSPKEPSNQASNL 1053
>SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 335
Score = 24.6 bits (51), Expect = 7.5
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2
Query: 272 LTNTAVVPLDLVKCRLQVDA 331
+T V PLD+VK RLQ ++
Sbjct: 37 ITTLTVTPLDVVKTRLQSES 56
>SPBC19C2.09 |sre1||sterol regulatory element binding protein
Sre1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 900
Score = 24.6 bits (51), Expect = 7.5
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = -1
Query: 456 PNLQRPCIEYPMKVGAHPLARPRTPSSRTDTLKPF 352
P P + P VGA P + P S++ T PF
Sbjct: 20 PTKASPDSKSPNSVGAIPSSSPLASSTKASTSTPF 54
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 24.6 bits (51), Expect = 7.5
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +2
Query: 332 EKYKNVVNGFKVSVREEGVRGL 397
++Y+ +NGFKV + EE + L
Sbjct: 1744 QRYQKELNGFKVQLEEEREKNL 1765
>SPAC1002.05c |jmj2||histone demethylase Jmj2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 715
Score = 24.2 bits (50), Expect = 9.9
Identities = 16/53 (30%), Positives = 20/53 (37%)
Frame = +2
Query: 53 LKHNNVLFVARCGAELSVPWPTIARPVPVDGRARGYRADRWHGGVRCGTHGVL 211
+K NN GA+LS A P Y D W+ V T+G L
Sbjct: 388 VKDNNTSLEVEYGADLSTLDQGSAFPSLAKNPVNPYSKDTWNLNVIASTNGSL 440
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,804,363
Number of Sequences: 5004
Number of extensions: 31839
Number of successful extensions: 136
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 136
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 176367270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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