Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20577
(465 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21443| Best HMM Match : Mito_carr (HMM E-Value=2.8e-26) 126 7e-30
SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23) 44 5e-05
SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22) 43 1e-04
SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 2e-04
SB_22047| Best HMM Match : Mito_carr (HMM E-Value=0) 40 8e-04
SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45) 39 0.002
SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31) 36 0.012
SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) 35 0.029
SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0) 35 0.029
SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13) 35 0.029
SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.038
SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0) 34 0.067
SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0) 34 0.067
SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0) 34 0.067
SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0) 33 0.088
SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44) 32 0.20
SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0) 31 0.36
SB_25734| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.36
SB_19190| Best HMM Match : Peptidase_A17 (HMM E-Value=0) 31 0.47
SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42) 31 0.62
SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0) 30 1.1
SB_26166| Best HMM Match : Mito_carr (HMM E-Value=0) 29 1.4
SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0) 29 1.4
SB_402| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.4
SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_46203| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_42813| Best HMM Match : Lectin_C (HMM E-Value=4.8e-21) 29 2.5
SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34) 29 2.5
SB_27933| Best HMM Match : Mito_carr (HMM E-Value=6.9e-17) 28 4.4
SB_9806| Best HMM Match : Mito_carr (HMM E-Value=0.061) 28 4.4
SB_42679| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-08) 27 5.8
SB_5197| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7
SB_15258| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7
>SB_21443| Best HMM Match : Mito_carr (HMM E-Value=2.8e-26)
Length = 205
Score = 126 bits (305), Expect = 7e-30
Identities = 54/69 (78%), Positives = 66/69 (95%)
Frame = +2
Query: 257 VLSCGLTNTAVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSM 436
+LSCGLT+TAVVPLDLVKCR+QVD +KY ++VNGFK++++E+GVRGLA+GWAPTFIGYSM
Sbjct: 63 ILSCGLTHTAVVPLDLVKCRIQVDPKKYGSMVNGFKITLKEDGVRGLARGWAPTFIGYSM 122
Query: 437 QGLCKFGFY 463
QGL KFGFY
Sbjct: 123 QGLGKFGFY 131
Score = 56.8 bits (131), Expect = 8e-09
Identities = 30/63 (47%), Positives = 37/63 (58%)
Frame = +3
Query: 66 MFSSLLDAARNSPFRGPLSPAQCQSTVAPVAIEQTGGMAASAAVPTESCEFGSPKYFALC 245
MFS + A+NS PLS A+C S V + + + ASAA SCEFGS KY+ALC
Sbjct: 1 MFSRYFETAKNSTLGDPLSVAKCPSDVR--SHRNSSRLMASAAGEQHSCEFGSAKYYALC 58
Query: 246 GVG 254
G G
Sbjct: 59 GFG 61
>SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23)
Length = 1026
Score = 44.4 bits (100), Expect = 5e-05
Identities = 28/63 (44%), Positives = 37/63 (58%), Gaps = 6/63 (9%)
Frame = +2
Query: 281 TAVVPLDLVKCRLQ-----VDAEK-YKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQG 442
TAV P+DLVK R+Q ++AEK YKN ++ F VR EG GL +G P +G S +
Sbjct: 929 TAVYPIDLVKTRMQNQRAVLEAEKVYKNSIDCFFKVVRNEGPIGLYRGLLPQLLGVSPEK 988
Query: 443 LCK 451
K
Sbjct: 989 AIK 991
>SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22)
Length = 95
Score = 43.2 bits (97), Expect = 1e-04
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +2
Query: 293 PLDLVKCRLQV-DAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIG 427
PLD+V+ RL + +KY ++N F R+EG+R +G+ PT IG
Sbjct: 9 PLDMVRARLAITQKKKYTGLINAFTRIYRDEGMRTFYRGYVPTLIG 54
>SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 42.3 bits (95), Expect = 2e-04
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +2
Query: 269 GLTNTAVVPLDLVKCRLQVDAEKYK--NVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQG 442
G++ TA PLD +K LQV A +V+GFK+ +RE G++ L +G I + +
Sbjct: 148 GVSRTATAPLDRLKVLLQVQASSTNRFGIVSGFKMMLREGGIKSLWRGNGANVIKIAPES 207
Query: 443 LCKFGFY 463
KF Y
Sbjct: 208 GIKFFAY 214
Score = 35.1 bits (77), Expect = 0.029
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 10/66 (15%)
Frame = +2
Query: 257 VLSCGLTNT-----AVVPLDLVKCRLQVDAEKY-----KNVVNGFKVSVREEGVRGLAKG 406
+L+CG ++ A PL LV+ RLQ A + N+V+ + + E+G +GL +G
Sbjct: 330 LLACGTASSTCGQLASYPLSLVRTRLQAQAREKGGGQGDNMVSVLRKIITEDGFKGLYRG 389
Query: 407 WAPTFI 424
AP F+
Sbjct: 390 LAPNFL 395
>SB_22047| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 421
Score = 40.3 bits (90), Expect = 8e-04
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +2
Query: 281 TAVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTF 421
T P D++K R+ + Y+ V F ++V EG+ L KGW PT+
Sbjct: 316 TISTPADVIKTRIMNNPSGYQGAVECFMLAVHREGLLSLYKGWLPTW 362
Score = 29.1 bits (62), Expect = 1.9
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 8/49 (16%)
Frame = +2
Query: 293 PLDLVKCRLQVDAEKY--------KNVVNGFKVSVREEGVRGLAKGWAP 415
P DLVK ++Q++ + + + F+ V + G RGL KGW P
Sbjct: 151 PTDLVKVQMQMEGRRLSFYPISSVRGTFHAFRNIVDKYGFRGLWKGWLP 199
>SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45)
Length = 773
Score = 39.1 bits (87), Expect = 0.002
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Frame = +2
Query: 272 LTNTAVVPLDLVKCRLQVDAE----KYKNVVNGFKVSVREEGVRGLAKGWAPTFI 424
+ + PLD+V+ R+Q++ KY + +GFKV VR EG GL KG P +
Sbjct: 694 VAQSGTYPLDVVRRRMQMERGEGMFKYSSTWDGFKVIVRSEGFIGLFKGMWPNLL 748
>SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 38.7 bits (86), Expect = 0.002
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Frame = +2
Query: 260 LSCGLTNTAVVPLDLVKCRLQVDAEK----YKNVVNGFKVSVREEGVRGLAKGWAPTFI 424
L+ ++ TA PLD+V+ R+Q+ + YK+ ++ F V+ EG RGL KG P +
Sbjct: 170 LAGAVSQTATYPLDVVRRRMQMKGIRADFAYKSTLHAFSSIVKLEGFRGLYKGMWPNIL 228
Score = 29.9 bits (64), Expect = 1.1
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +2
Query: 272 LTNTAVVPLDLVKCRLQVDAE--KYKNVVNGFKVSVREEGVRGLAKG 406
++ T+V PL+ VK LQ+ + K+K V+ +EEG+ G KG
Sbjct: 47 VSRTSVSPLERVKILLQIQVKNPKFKGVLPTLIQIGKEEGILGYFKG 93
>SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31)
Length = 233
Score = 36.3 bits (80), Expect = 0.012
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +2
Query: 293 PLDLVKCRLQVDAEK--YKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFY 463
P +L+K RLQV + Y ++ F +R EGVRGL KG+ + G G C Y
Sbjct: 35 PANLIKIRLQVQRKTTLYNGSLDAFTKVIRTEGVRGLYKGYLVSCAGL-FAGQCYITTY 92
>SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 375
Score = 35.1 bits (77), Expect = 0.029
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Frame = +2
Query: 287 VVPLDLVKCRLQVDAEK-----YKNVVNGFKVSVREEGVRGLAKGWAPTFIG 427
V P +++K RL V YK + + K +REEG+ L KG P+F+G
Sbjct: 170 VYPCEVIKTRLTVQHVNKSNAHYKGMRHALKTILREEGILALYKGVTPSFLG 221
>SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 434
Score = 35.1 bits (77), Expect = 0.029
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 10/68 (14%)
Frame = +2
Query: 251 WRVLS---CGLTNTAVV-PLDLVKCRLQVDAEKYKNVVN--GFKVSVR----EEGVRGLA 400
WR +S G+ TA PLD+V+ RL V +++ N G ++R EEG+RGL
Sbjct: 30 WRFVSGATAGVVATASTHPLDVVRARLTVQDMSTRSISNYTGIVSALRRIHIEEGIRGLY 89
Query: 401 KGWAPTFI 424
KG P+ +
Sbjct: 90 KGLVPSLV 97
>SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13)
Length = 577
Score = 35.1 bits (77), Expect = 0.029
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 8/68 (11%)
Frame = +2
Query: 245 RSWRVLSCGLTNTAVV---PLDLVKCRLQVDAEK-----YKNVVNGFKVSVREEGVRGLA 400
R W ++ T A+V P +++K RL V YK + + K +REEG+ L
Sbjct: 422 RDWSLVGTSSTLIAMVTVYPCEVIKTRLTVQHVNKSNAHYKGMRHALKTILREEGILALY 481
Query: 401 KGWAPTFI 424
KG P+F+
Sbjct: 482 KGVTPSFL 489
>SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 34.7 bits (76), Expect = 0.038
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 11/64 (17%)
Frame = +2
Query: 260 LSCGLTNTAVVPLDLVKCRLQVDA-----------EKYKNVVNGFKVSVREEGVRGLAKG 406
LS ++ ++P D++K R+QV ++Y V + F+ ++EEG GL KG
Sbjct: 38 LSGMISKAVILPFDIIKKRIQVQGFEEARQSFGRVQQYDGVKDCFRTILKEEGAMGLFKG 97
Query: 407 WAPT 418
AP+
Sbjct: 98 LAPS 101
>SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 306
Score = 33.9 bits (74), Expect = 0.067
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Frame = +2
Query: 260 LSCGLTNTAVV-PLDLVKCRLQV----DAEKYKNVVNGFKVSVREEGVRGLAKGWAPT 418
+S G+ +A+ P DLVK R Q + YKN+ + F ++EG GL G PT
Sbjct: 122 VSSGVIGSAIATPTDLVKIRFQAVKIGETIPYKNMFHAFYKIAKKEGFLGLWTGMKPT 179
Score = 30.7 bits (66), Expect = 0.62
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 15/72 (20%)
Frame = +2
Query: 293 PLDLVKCRLQVDAEK--------------YKNVVN-GFKVSVREEGVRGLAKGWAPTFIG 427
P+++VK R+Q+D E YK ++ G REEGVRGL +G P +
Sbjct: 26 PIEVVKIRMQLDNELGSKHNSKDIFRERYYKGLIRTGLSRVYREEGVRGLYRGIFPALLR 85
Query: 428 YSMQGLCKFGFY 463
++ + G Y
Sbjct: 86 QAIYSSTRLGAY 97
>SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 309
Score = 33.9 bits (74), Expect = 0.067
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Frame = +2
Query: 260 LSCGL-TNTAVVPLDLVKCRLQVDAEKYKNVVNGFKVSVR----EEGVRGLAKGWAPTFI 424
L CG + P + +KC LQV+A + +G V+ EEGVRG+ +G PT I
Sbjct: 128 LFCGFCVSFLFAPAERIKCILQVEAGASGSTQSGPYAIVKRIYAEEGVRGIFRGLPPTMI 187
Score = 32.3 bits (70), Expect = 0.20
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 7/45 (15%)
Frame = +2
Query: 293 PLDLVKCRLQV-------DAEKYKNVVNGFKVSVREEGVRGLAKG 406
PLDL+K RLQ + +K ++ F +VR EG+RGL KG
Sbjct: 40 PLDLLKVRLQAMNQVKPGETAPFKGAMDCFMKTVRLEGLRGLYKG 84
>SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 328
Score = 33.9 bits (74), Expect = 0.067
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Frame = +2
Query: 275 TNTAVVPLDLVKCRLQVD----AEKYKNVVNGFKVSVREEGVRGLAKGWAPT 418
T+ + PLD VKC LQ++ Y V+ + RE GVRG+ KG + T
Sbjct: 151 TSFVLTPLDRVKCILQIEKAFGGSSYGGPVDCLRRIYREAGVRGVYKGISVT 202
>SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 200
Score = 33.5 bits (73), Expect = 0.088
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Frame = +2
Query: 260 LSCGLTNTAVVPLDLVKCRLQV-----DAEKYKNVVNGFKVSVREEGV-RGLAKGWAPTF 421
L+ + T PLD+V+ R+Q+ D KY +N F E+G+ RGL +G + +
Sbjct: 115 LAGATSQTLAYPLDVVRRRMQLAGTVADGHKYSTCINTFISVYTEDGIRRGLYRGLSINY 174
Query: 422 IGYSMQGLCKFGFY 463
+ Q F Y
Sbjct: 175 LRVCPQVAVMFAVY 188
>SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44)
Length = 192
Score = 32.3 bits (70), Expect = 0.20
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Frame = +2
Query: 275 TNTAVVPLDLVKCRLQ----VDAE-KYKNVVNGFKVSVREEGVRGLAKGWAPTF 421
T A +P+D+ K R+Q +D + +YK ++ VR EGV L KG+ P +
Sbjct: 107 TTVASMPVDIAKTRIQNMRIIDGKPEYKGTMDVLARIVRNEGVFALWKGFTPYY 160
>SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 264
Score = 31.5 bits (68), Expect = 0.36
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Frame = +2
Query: 269 GLTNTAVV-PLDLVKCRL--QVDAEK-YKNVVNGFK-VSVREEGVRGLAKGWAPTFI 424
G+T A PLD+V+ RL QV ++ Y + + +SV+E G + L KG+ PT +
Sbjct: 75 GMTACACTYPLDMVRSRLAFQVAQDQGYTTITQTIRCISVKEGGPKALYKGFVPTLL 131
>SB_25734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1938
Score = 31.5 bits (68), Expect = 0.36
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 314 RLQVDA-EKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFY 463
R + DA +K GF ++ +EEG L K T YS++GL KF FY
Sbjct: 909 RTKPDATDKVYGEFQGFNITYKEEGGGTLYKTADHTKRSYSIKGLKKFTFY 959
>SB_19190| Best HMM Match : Peptidase_A17 (HMM E-Value=0)
Length = 1829
Score = 31.1 bits (67), Expect = 0.47
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = -3
Query: 253 PTPQRAKYLGDPNSQDSVGTAADAAMPPVCSIATGATVDWHWAGDSG 113
P P RA L P + S G+ A+ A PP +ATG + + SG
Sbjct: 816 PPPGRASQL--PLQEQSSGSRAEEASPPPALVATGPSASYRLPNASG 860
>SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42)
Length = 247
Score = 30.7 bits (66), Expect = 0.62
Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +2
Query: 269 GLTN-TAVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGW-APTFI 424
G+T TA PLD +K RLQ A ++ +V+ EGVRGL KG AP +
Sbjct: 80 GVTGVTAGQPLDTIKVRLQ--ASFGAGPLDMLARTVKTEGVRGLYKGMLAPVLV 131
>SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 203
Score = 29.9 bits (64), Expect = 1.1
Identities = 12/42 (28%), Positives = 25/42 (59%)
Frame = +2
Query: 284 AVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGW 409
A+ P++++K RLQ+ Y+ V++ +EEG+R + +
Sbjct: 14 AMNPIEVIKQRLQMYGSPYRGVIHCATSVFKEEGIRAFYRSY 55
>SB_26166| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 612
Score = 29.5 bits (63), Expect = 1.4
Identities = 14/69 (20%), Positives = 30/69 (43%)
Frame = +2
Query: 257 VLSCGLTNTAVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSM 436
+++ + + P D+VK RLQ++ Y + + G+ GL +G P + ++
Sbjct: 531 IMAGAMASVVTQPADVVKTRLQMNPYMYPSNRAAVVAIIEAGGIEGLFRGLVPRTVRRTL 590
Query: 437 QGLCKFGFY 463
+ Y
Sbjct: 591 MSAMAWTIY 599
>SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 274
Score = 29.5 bits (63), Expect = 1.4
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Frame = +2
Query: 293 PLDLVKCRLQVDAE----KYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGL 445
P D++K R+Q D +YK +++ S +EEG+ +G PT + +Q L
Sbjct: 152 PFDVIKSRIQADGNLGKFRYKGMMDCALQSYKEEGMIVFTRGIWPTLLRGFLQVL 206
>SB_402| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 730
Score = 29.5 bits (63), Expect = 1.4
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = -3
Query: 220 PNSQDSVGTAADAAMPPVCSIATGATVDWHWAGD-SGPRNGEFRAASSNEENIIM 59
P Q T A PPV +G+ D W GD S P+ + R+ N +M
Sbjct: 398 PQPQKPPATRPSATPPPVTGDESGSDYDEDWGGDWSEPKPTQSRSIVGEMRNDLM 452
>SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 29.1 bits (62), Expect = 1.9
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = +2
Query: 293 PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFY 463
P D +K ++Q KN ++ + ++EG +GL G P+ + F FY
Sbjct: 29 PFDTIKVKMQTFPSMSKNALDCGIKTFKQEGFKGLYAGTIPSLAANIAENSFLFLFY 85
>SB_46203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 557
Score = 28.7 bits (61), Expect = 2.5
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +3
Query: 132 CQSTVAPVAIEQTGGMAASAAVPTES 209
C ST PV +QT A+SA VPT S
Sbjct: 154 CLSTARPVTTQQTKKPASSAFVPTTS 179
>SB_42813| Best HMM Match : Lectin_C (HMM E-Value=4.8e-21)
Length = 276
Score = 28.7 bits (61), Expect = 2.5
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +2
Query: 236 CSLRSWRVLSCGLTNTA---VVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEG 385
C+ ++W +CG + A + D+ C + D Y+N VNG +R +G
Sbjct: 32 CAHKNWGSHNCGHSEDAGVTCITTDMSSCSFEEDQCSYRNGVNGGYNWLRRKG 84
>SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34)
Length = 302
Score = 28.7 bits (61), Expect = 2.5
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
Frame = +2
Query: 269 GLT-NTAVVPLDLVKCRLQV-----DAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFI 424
G+T + AV PLD++K RLQ+ Y +++ K EG+ KG P I
Sbjct: 216 GMTASVAVNPLDVIKTRLQLLNRPQGEPNYNGIIDCAKKIYSNEGLAAFYKGAVPRMI 273
>SB_27933| Best HMM Match : Mito_carr (HMM E-Value=6.9e-17)
Length = 187
Score = 27.9 bits (59), Expect = 4.4
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 9/76 (11%)
Frame = +2
Query: 263 SCGLTNTAVVPLDLVKCRLQVDAEK---------YKNVVNGFKVSVREEGVRGLAKGWAP 415
+C TN PL++VK R+Q+ E Y+NV + + EG+ + KG P
Sbjct: 18 ACFFTN----PLEVVKTRMQLQGELKSRGTYSVYYRNVFHASYTIAKYEGILAMQKGLFP 73
Query: 416 TFIGYSMQGLCKFGFY 463
I + + G Y
Sbjct: 74 ALIYQVIMNGTRLGSY 89
>SB_9806| Best HMM Match : Mito_carr (HMM E-Value=0.061)
Length = 114
Score = 27.9 bits (59), Expect = 4.4
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +2
Query: 266 CGLTNTAVVPLDLVKCRLQVDAEKYKN--VVNGFKVSVREEGVRGLAK 403
C T TA PL+ +K Q + YKN V K ++EG++G K
Sbjct: 68 CAKTTTA--PLERLKILFQAQNKHYKNMSVFGALKAIYKKEGLQGYYK 113
>SB_42679| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-08)
Length = 537
Score = 27.5 bits (58), Expect = 5.8
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 305 VKCRLQVDAEKYKNVVNGFKVSVREE 382
V C L + E+Y++VVN KV V+ +
Sbjct: 301 VSCSLVLTYERYRSVVNSVKVKVKSK 326
>SB_5197| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1653
Score = 27.1 bits (57), Expect = 7.7
Identities = 18/69 (26%), Positives = 25/69 (36%)
Frame = -3
Query: 262 QNTPTPQRAKYLGDPNSQDSVGTAADAAMPPVCSIATGATVDWHWAGDSGPRNGEFRAAS 83
+N T R +YL NS G I V +W P N EF +
Sbjct: 417 RNGGTSGRTEYLFTTNSSPEGGVCFSEPTAGEALITNFKIVCTNWTDSDKPLNYEFSYSE 476
Query: 82 SNEENIIMF 56
S +E ++ F
Sbjct: 477 SGKEVLLSF 485
>SB_15258| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 264
Score = 27.1 bits (57), Expect = 7.7
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 113 PTIARPVPVDGRARGYRADRW 175
P + R +DGR +GYR +W
Sbjct: 3 PRVHRSYALDGRCKGYRFKKW 23
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,686,922
Number of Sequences: 59808
Number of extensions: 294871
Number of successful extensions: 915
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 910
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 957531822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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