Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20576
(718 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6NNV1 Cluster: RE40459p; n=2; Drosophila melanogaster|... 132 8e-30
UniRef50_A0ZT94 Cluster: Escherichia coli endonuclease III-like ... 131 1e-29
UniRef50_P78549 Cluster: Endonuclease III-like protein 1; n=15; ... 123 5e-27
UniRef50_Q17E62 Cluster: Endonuclease iii; n=3; Eumetazoa|Rep: E... 122 1e-26
UniRef50_UPI00015558FC Cluster: PREDICTED: similar to Nth endonu... 118 1e-25
UniRef50_Q4RZY3 Cluster: Chromosome 18 SCAF14786, whole genome s... 114 2e-24
UniRef50_Q8X0U3 Cluster: Related to DNA repair protein NTG1; n=3... 110 4e-23
UniRef50_Q54ZV6 Cluster: Puative endonuclease III; n=3; Eukaryot... 105 1e-21
UniRef50_Q53LY1 Cluster: Endonuclease III homologue; n=5; Oryza ... 103 6e-21
UniRef50_Q4WIP5 Cluster: DNA repair protein Ntg1, putative; n=4;... 101 1e-20
UniRef50_Q4QI30 Cluster: Endonuclease III, putative; n=7; Trypan... 101 2e-20
UniRef50_A6RC36 Cluster: Putative uncharacterized protein; n=1; ... 101 2e-20
UniRef50_A2QUZ6 Cluster: Contig An10c0030, complete genome; n=1;... 100 4e-20
UniRef50_Q5KDK4 Cluster: DNA-(Apurinic or apyrimidinic site) lya... 99 9e-20
UniRef50_A7E6E2 Cluster: Putative uncharacterized protein; n=2; ... 99 1e-19
UniRef50_Q4P6P8 Cluster: Putative uncharacterized protein; n=2; ... 98 2e-19
UniRef50_Q2U8L6 Cluster: Endonuclease III; n=4; Pezizomycotina|R... 98 2e-19
UniRef50_Q9MA35 Cluster: T20M3.18 protein; n=8; core eudicotyled... 97 4e-19
UniRef50_Q1EB53 Cluster: Putative uncharacterized protein; n=1; ... 97 5e-19
UniRef50_P54137 Cluster: Probable endonuclease III homolog (EC 4... 97 5e-19
UniRef50_Q0UCF2 Cluster: Putative uncharacterized protein; n=1; ... 96 7e-19
UniRef50_A3LQB2 Cluster: Endonuclease III; n=3; Saccharomycetace... 96 9e-19
UniRef50_Q4N0H4 Cluster: Endonuclease III, putative; n=3; Piropl... 95 1e-18
UniRef50_Q6C305 Cluster: Yarrowia lipolytica chromosome F of str... 91 2e-17
UniRef50_A5AXK0 Cluster: Putative uncharacterized protein; n=1; ... 91 3e-17
UniRef50_Q09907 Cluster: Endonuclease III homolog (EC 4.2.99.18)... 91 3e-17
UniRef50_A3FPN4 Cluster: Endonuclease III, putative; n=2; Crypto... 90 6e-17
UniRef50_A2DNH5 Cluster: HhH-GPD superfamily base excision DNA r... 89 1e-16
UniRef50_Q9P8Q0 Cluster: Ntg1; n=3; Saccharomycetales|Rep: Ntg1 ... 89 1e-16
UniRef50_Q58030 Cluster: Putative endonuclease MJ0613; n=6; Meth... 89 1e-16
UniRef50_Q6FRS5 Cluster: Similar to sp|P31378 Saccharomyces cere... 87 5e-16
UniRef50_A5UW97 Cluster: DNA-(Apurinic or apyrimidinic site) lya... 85 1e-15
UniRef50_Q22BE5 Cluster: HhH-GPD superfamily base excision DNA r... 85 1e-15
UniRef50_Q7RCV0 Cluster: Drosophila melanogaster CG9272 gene pro... 85 2e-15
UniRef50_O28581 Cluster: Endonuclease III; n=1; Archaeoglobus fu... 85 2e-15
UniRef50_A5K1Y6 Cluster: Endonuclease III homologue, putative; n... 83 5e-15
UniRef50_Q6CKW0 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 83 9e-15
UniRef50_A7TPL7 Cluster: Putative uncharacterized protein; n=1; ... 82 1e-14
UniRef50_Q2LWZ1 Cluster: Endonuclease III N; n=1; Syntrophus aci... 82 2e-14
UniRef50_Q9WYK0 Cluster: Endonuclease III (EC 4.2.99.18) (DNA-(a... 81 3e-14
UniRef50_Q74D69 Cluster: Endonuclease III, putative; n=2; Bacter... 81 4e-14
UniRef50_O66636 Cluster: Endonuclease III; n=1; Aquifex aeolicus... 81 4e-14
UniRef50_Q74N20 Cluster: NEQ398; n=1; Nanoarchaeum equitans|Rep:... 81 4e-14
UniRef50_Q8SRB8 Cluster: ENDONUCLEASE III; n=1; Encephalitozoon ... 80 5e-14
UniRef50_Q6L0L9 Cluster: Endonuclease III; n=5; Thermoplasmatale... 80 6e-14
UniRef50_Q8THA8 Cluster: DNA-(Apurinic or apyrimidinic site) lya... 79 1e-13
UniRef50_UPI00015BCD73 Cluster: UPI00015BCD73 related cluster; n... 78 2e-13
UniRef50_P31378 Cluster: DNA base excision repair N-glycosylase ... 78 2e-13
UniRef50_O26858 Cluster: Endonuclease III; n=2; Methanobacteriac... 77 3e-13
UniRef50_Q08214 Cluster: DNA base excision repair N-glycosylase ... 75 2e-12
UniRef50_Q0AYC8 Cluster: Endonuclease III; n=1; Syntrophomonas w... 75 2e-12
UniRef50_Q7R032 Cluster: GLP_456_43375_44346; n=1; Giardia lambl... 72 1e-11
UniRef50_Q8R957 Cluster: Predicted EndoIII-related endonuclease;... 71 3e-11
UniRef50_A0RYU8 Cluster: EndoIII-related endonuclease; n=3; Arch... 71 3e-11
UniRef50_UPI0000499274 Cluster: endonuclease III; n=2; Entamoeba... 70 5e-11
UniRef50_A6Q118 Cluster: Endonuclease III; n=1; Nitratiruptor sp... 69 2e-10
UniRef50_Q702G0 Cluster: Putative endonuclease III; n=1; uncultu... 67 4e-10
UniRef50_Q3AD17 Cluster: Endonuclease III; n=1; Carboxydothermus... 67 5e-10
UniRef50_Q1CYH4 Cluster: Base excision DNA repair protein, HhH-G... 66 8e-10
UniRef50_A0DCH8 Cluster: Chromosome undetermined scaffold_45, wh... 66 8e-10
UniRef50_Q8U1H8 Cluster: Glycosylase putative; mutY-nth family; ... 63 8e-09
UniRef50_Q00UQ6 Cluster: Endonuclease III; n=2; Ostreococcus|Rep... 62 1e-08
UniRef50_Q8YEU5 Cluster: ENDONUCLEASE III; n=21; Alphaproteobact... 62 1e-08
UniRef50_Q7NJL1 Cluster: Endonuclease III; n=1; Gloeobacter viol... 62 2e-08
UniRef50_A2DVT6 Cluster: Endonuclease III, putative; n=1; Tricho... 61 2e-08
UniRef50_A3EW96 Cluster: Putative EndoIII-related endonuclease; ... 60 4e-08
UniRef50_Q11CD9 Cluster: Endonuclease III; n=3; Rhizobiales|Rep:... 60 7e-08
UniRef50_A4E9V4 Cluster: Putative uncharacterized protein; n=1; ... 59 9e-08
UniRef50_Q2S025 Cluster: Endonuclease III; n=2; Sphingobacterial... 58 2e-07
UniRef50_Q64R69 Cluster: Endonuclease III; n=12; Bacteroidetes|R... 57 5e-07
UniRef50_Q5KXY2 Cluster: Endonuclease III (DNA-(Apurinic or apyr... 57 5e-07
UniRef50_Q6MQ89 Cluster: Endo III-related endonuclease; n=2; Bac... 56 7e-07
UniRef50_Q1FPF6 Cluster: HhH-GPD; n=1; Clostridium phytofermenta... 56 1e-06
UniRef50_Q2RH98 Cluster: Endonuclease III; n=1; Moorella thermoa... 55 2e-06
UniRef50_Q08S09 Cluster: Endonuclease III; n=2; Cystobacterineae... 55 2e-06
UniRef50_P39788 Cluster: Probable endonuclease III (EC 4.2.99.18... 55 2e-06
UniRef50_UPI00015BD5DD Cluster: UPI00015BD5DD related cluster; n... 55 2e-06
UniRef50_Q8KBS3 Cluster: Endonuclease III; n=10; Chlorobiaceae|R... 55 2e-06
UniRef50_Q97QE0 Cluster: Endonuclease III; n=25; Streptococcus|R... 54 3e-06
UniRef50_A7DG78 Cluster: HhH-GPD family protein; n=2; Methylobac... 54 3e-06
UniRef50_A6C1X5 Cluster: Endonuclease III; n=1; Planctomyces mar... 54 4e-06
UniRef50_A3DEY6 Cluster: Endonuclease III; n=2; Clostridiales|Re... 54 5e-06
UniRef50_O66786 Cluster: Endonuclease III; n=1; Aquifex aeolicus... 53 6e-06
UniRef50_Q8D2L5 Cluster: Nth protein; n=1; Wigglesworthia glossi... 53 8e-06
UniRef50_Q5FJX5 Cluster: Endonuclease III; n=5; Lactobacillus|Re... 53 8e-06
UniRef50_Q821L1 Cluster: Endonuclease III; n=7; Chlamydiaceae|Re... 51 3e-05
UniRef50_Q72GF6 Cluster: Endonuclease III; n=3; Bacteria|Rep: En... 51 3e-05
UniRef50_Q1RGX7 Cluster: Endonuclease III; n=4; Rickettsiales|Re... 51 3e-05
UniRef50_Q1Q3W2 Cluster: Similar to endonuclease III; n=1; Candi... 50 4e-05
UniRef50_O51686 Cluster: Endonuclease III; n=3; Borrelia burgdor... 50 6e-05
UniRef50_Q7VFV0 Cluster: Endonuclease III; n=26; Epsilonproteoba... 50 8e-05
UniRef50_Q2JW22 Cluster: Base excision DNA repair protein, HhH-G... 50 8e-05
UniRef50_A6PRP8 Cluster: Endonuclease III; n=1; Victivallis vade... 50 8e-05
UniRef50_Q3AY54 Cluster: Endonuclease III/Nth; n=28; Bacteria|Re... 49 1e-04
UniRef50_Q0LC20 Cluster: HhH-GPD; n=1; Herpetosiphon aurantiacus... 49 1e-04
UniRef50_A5KNW1 Cluster: Putative uncharacterized protein; n=6; ... 49 1e-04
UniRef50_A5FGA8 Cluster: DNA-(Apurinic or apyrimidinic site) lya... 49 1e-04
UniRef50_A7I6B8 Cluster: Endonuclease III; n=1; Candidatus Metha... 49 1e-04
UniRef50_Q4UK93 Cluster: Endonuclease III (EC 4.2.99.18) (DNA-(a... 49 1e-04
UniRef50_Q6NJT9 Cluster: Endonuclease III; n=5; Actinomycetales|... 49 1e-04
UniRef50_Q1JZE5 Cluster: Endonuclease III; n=1; Desulfuromonas a... 49 1e-04
UniRef50_A7DLE4 Cluster: Endonuclease III; n=2; Methylobacterium... 49 1e-04
UniRef50_Q89AW4 Cluster: Endonuclease III (EC 4.2.99.18) (DNA-(a... 48 2e-04
UniRef50_Q8TIX5 Cluster: DNA-(Apurinic or apyrimidinic site) lya... 48 2e-04
UniRef50_A7HGS0 Cluster: Endonuclease III; n=4; Cystobacterineae... 48 3e-04
UniRef50_O05956 Cluster: Endonuclease III (EC 4.2.99.18) (DNA-(a... 48 3e-04
UniRef50_Q038W3 Cluster: Predicted EndoIII-related endonuclease;... 47 4e-04
UniRef50_Q5V420 Cluster: Endonuclease III; n=5; Halobacteriaceae... 47 4e-04
UniRef50_UPI000049880C Cluster: endonuclease III; n=1; Entamoeba... 47 5e-04
UniRef50_A5VZI4 Cluster: Endonuclease III; n=6; Pseudomonas|Rep:... 46 7e-04
UniRef50_A4YJP3 Cluster: Endonuclease III DNA-(Apurinic or apyri... 46 7e-04
UniRef50_P73715 Cluster: Endonuclease III (EC 4.2.99.18) (DNA-(a... 46 7e-04
UniRef50_A5VHZ3 Cluster: Endonuclease III; n=2; Lactobacillus re... 46 0.001
UniRef50_Q8G779 Cluster: Endonuclease III; n=1; Bifidobacterium ... 46 0.001
UniRef50_A4B3H0 Cluster: Endonuclease III/Nth; n=20; Bacteria|Re... 46 0.001
UniRef50_A3CUC0 Cluster: Endonuclease III; n=3; Methanomicrobial... 46 0.001
UniRef50_Q7VR51 Cluster: Endonuclease III; n=1; Candidatus Bloch... 45 0.002
UniRef50_Q1YF33 Cluster: Endonuclease III; n=5; Alphaproteobacte... 45 0.002
UniRef50_A4YIJ7 Cluster: DNA-(Apurinic or apyrimidinic site) lya... 45 0.002
UniRef50_P63541 Cluster: Endonuclease III (EC 4.2.99.18) (DNA-(a... 45 0.002
UniRef50_Q38X63 Cluster: Putative DNA repair protein, endonuclea... 45 0.002
UniRef50_O32331 Cluster: Putative endonuclease III; n=1; Clostri... 45 0.002
UniRef50_A3H933 Cluster: HhH-GPD; n=1; Caldivirga maquilingensis... 44 0.003
UniRef50_A0B7M5 Cluster: HhH-GPD family protein; n=1; Methanosae... 44 0.003
UniRef50_A5D023 Cluster: Predicted EndoIII-related endonuclease;... 44 0.004
UniRef50_Q971F2 Cluster: 224aa long hypothetical endonuclease II... 44 0.004
UniRef50_Q6T7F7 Cluster: MutY; n=15; Gammaproteobacteria|Rep: Mu... 44 0.005
UniRef50_Q8F482 Cluster: Endonuclease III; n=4; Leptospira|Rep: ... 43 0.007
UniRef50_Q1FM66 Cluster: Endonuclease III; n=1; Clostridium phyt... 43 0.007
UniRef50_A1G5J4 Cluster: Endonuclease III precursor; n=4; Actino... 43 0.007
UniRef50_Q2JQP9 Cluster: Endonuclease III; n=13; Bacteria|Rep: E... 43 0.009
UniRef50_Q0LEY5 Cluster: HhH-GPD; n=1; Herpetosiphon aurantiacus... 43 0.009
UniRef50_A4XHC4 Cluster: HhH-GPD family protein; n=1; Caldicellu... 43 0.009
UniRef50_Q8TYU8 Cluster: Predicted EndoIII-related endonuclease;... 42 0.011
UniRef50_Q2JMR3 Cluster: Endonuclease III; n=7; Bacteria|Rep: En... 42 0.015
UniRef50_Q9Z8E1 Cluster: Adenine Glycosylase; n=4; Chlamydophila... 42 0.020
UniRef50_Q4FPF4 Cluster: A/G-specific adenine glycosylase; n=2; ... 42 0.020
UniRef50_Q1FHV1 Cluster: A/G-specific adenine glycosylase; n=1; ... 42 0.020
UniRef50_Q1ZXP7 Cluster: A/G-specific adenine DNA glycosylase; n... 42 0.020
UniRef50_Q1JU55 Cluster: A/G-specific adenine glycosylase; n=4; ... 41 0.027
UniRef50_Q1J700 Cluster: Endonuclease III; n=11; Streptococcus p... 41 0.027
UniRef50_Q1EVT3 Cluster: A/G-specific adenine glycosylase MutY; ... 41 0.027
UniRef50_A6G2S7 Cluster: Putative endonuclease; n=1; Plesiocysti... 41 0.027
UniRef50_Q9WYL3 Cluster: Repair endonuclease, putative; n=4; The... 41 0.035
UniRef50_A6GGY6 Cluster: Endonuclease III, putative; n=1; Plesio... 41 0.035
UniRef50_Q89A45 Cluster: A/G-specific adenine glycosylase; n=4; ... 41 0.035
UniRef50_UPI0000E87CC6 Cluster: A/G-specific adenine glycosylase... 40 0.046
UniRef50_Q7NMV9 Cluster: Endonuclease III; n=1; Gloeobacter viol... 40 0.046
UniRef50_Q9SR66 Cluster: DEMETER-like protein 2; n=2; Arabidopsi... 40 0.046
UniRef50_Q9RRQ0 Cluster: Endonuclease III; n=2; Deinococcus|Rep:... 40 0.061
UniRef50_A4VZ25 Cluster: Uncharacterized protein related to Endo... 40 0.061
UniRef50_A0H0W7 Cluster: HhH-GPD; n=1; Chloroflexus aggregans DS... 40 0.061
UniRef50_Q67VC2 Cluster: HhH-GPD base excision DNA repair protei... 40 0.081
UniRef50_A6NQR4 Cluster: Putative uncharacterized protein; n=1; ... 39 0.11
UniRef50_Q9TS62 Cluster: Pyrimidine HYDRATE-thymine glycol DNase... 39 0.11
UniRef50_A5BYI7 Cluster: Putative uncharacterized protein; n=1; ... 39 0.14
UniRef50_Q97IY7 Cluster: A/G-specific DNA glycosylase; n=1; Clos... 38 0.19
UniRef50_Q9YFV0 Cluster: Endonuclease III; n=2; Desulfurococcale... 38 0.19
UniRef50_A3DPA2 Cluster: HhH-GPD family protein; n=2; Thermoprot... 38 0.19
UniRef50_Q1MS05 Cluster: A/G-specific DNA glycosylase; n=1; Laws... 38 0.25
UniRef50_Q6K6Q6 Cluster: Transcriptional activator-like; n=3; Or... 38 0.25
UniRef50_Q84EW6 Cluster: Putative endonuclease III; n=1; Lactoba... 38 0.33
UniRef50_A4A299 Cluster: HhH-GPD protein; n=1; Blastopirellula m... 38 0.33
UniRef50_Q5V120 Cluster: Endonuclease III; n=3; Halobacteriaceae... 38 0.33
UniRef50_Q9CH97 Cluster: A/G-specific adenine glycosylase; n=3; ... 37 0.43
UniRef50_Q2RI70 Cluster: HhH-GPD; n=1; Moorella thermoacetica AT... 37 0.43
UniRef50_A0LF51 Cluster: HhH-GPD family protein; n=1; Syntrophob... 37 0.43
UniRef50_A4R3A5 Cluster: Putative uncharacterized protein; n=1; ... 37 0.43
UniRef50_Q0W1Z4 Cluster: Putative DNA glycosylase; n=1; uncultur... 37 0.43
UniRef50_Q0W1A0 Cluster: Predicted endonuclease III; n=1; uncult... 37 0.43
UniRef50_Q9A623 Cluster: Endonuclease III family protein; n=2; C... 37 0.57
UniRef50_Q67NN1 Cluster: A/G-specific adenine glycosylase; n=1; ... 37 0.57
UniRef50_Q6UQ60 Cluster: TspRI; n=1; Thermus sp. R|Rep: TspRI - ... 37 0.57
UniRef50_Q6K6R4 Cluster: Putative transcriptional activator DEME... 37 0.57
UniRef50_Q0E138 Cluster: Os02g0494700 protein; n=3; Oryza sativa... 37 0.57
UniRef50_Q2LY55 Cluster: A/g-specific DNA glycosylase; n=1; Synt... 36 0.76
UniRef50_O31584 Cluster: YfhQ protein; n=18; Bacillaceae|Rep: Yf... 36 0.76
UniRef50_Q0JPK6 Cluster: Os01g0217900 protein; n=3; Oryza sativa... 36 0.76
UniRef50_Q978W9 Cluster: Endonuclease III; n=3; Thermoplasma|Rep... 36 0.76
UniRef50_Q4J8R2 Cluster: Endonuclease III; n=1; Sulfolobus acido... 36 0.76
UniRef50_UPI0000D56982 Cluster: PREDICTED: similar to radial spo... 36 1.00
UniRef50_Q8CV61 Cluster: A/G-specific adenine glycosylase; n=1; ... 36 1.00
UniRef50_Q2AG48 Cluster: HhH-GPD; n=2; Clostridia|Rep: HhH-GPD -... 36 1.00
UniRef50_A7DHR9 Cluster: A/G-specific adenine glycosylase; n=2; ... 36 1.00
UniRef50_A6PBP1 Cluster: HhH-GPD family protein; n=1; Shewanella... 36 1.00
UniRef50_Q6L1H4 Cluster: Endonuclease III; n=1; Picrophilus torr... 36 1.00
UniRef50_P95945 Cluster: Endonuclease III; n=1; Sulfolobus solfa... 36 1.00
UniRef50_P46044 Cluster: FeMo cofactor biosynthesis protein nifB... 36 1.00
UniRef50_Q92CE3 Cluster: Lin1229 protein; n=12; Listeria|Rep: Li... 36 1.3
UniRef50_Q88SQ0 Cluster: A/G-specific adenine glycosylase; n=2; ... 36 1.3
UniRef50_Q830R8 Cluster: A/G-specific adenine glycosylase; n=46;... 36 1.3
UniRef50_Q4ZLP4 Cluster: A/G-specific adenine glycosylase MutY; ... 36 1.3
UniRef50_Q1K3W8 Cluster: A/G-specific adenine glycosylase; n=2; ... 36 1.3
UniRef50_A1IEQ4 Cluster: A/G-specific adenine glycosylase; n=1; ... 36 1.3
UniRef50_A2DVT5 Cluster: Putative uncharacterized protein; n=1; ... 36 1.3
UniRef50_Q5V6M5 Cluster: Endonuclease III; n=3; Halobacteriaceae... 36 1.3
UniRef50_A1RTM9 Cluster: HhH-GPD family protein; n=3; Pyrobaculu... 36 1.3
UniRef50_Q8F3S2 Cluster: A/G-specific DNA glycosylase; n=4; Lept... 35 1.7
UniRef50_Q5HN66 Cluster: A/G-specific adenine glycosylase; n=16;... 35 1.7
UniRef50_A6PM32 Cluster: A/G-specific adenine glycosylase; n=10;... 35 1.7
UniRef50_Q9P9L6 Cluster: U/G and T/G mismatch-specific DNA glyco... 35 1.7
UniRef50_A3MV22 Cluster: Iron-sulfur cluster loop containing pro... 35 1.7
UniRef50_A3ZT46 Cluster: A/G-specific adenine glycosylase; n=1; ... 35 2.3
UniRef50_Q6JJ31 Cluster: Putative endonuclease III protein; n=1;... 35 2.3
UniRef50_Q58829 Cluster: Putative endonuclease MJ1434; n=4; cell... 35 2.3
UniRef50_Q9KEC2 Cluster: Adenine glycosylase; n=6; Bacillaceae|R... 34 3.0
UniRef50_A7CQ19 Cluster: Helix-hairpin-helix motif; n=1; Opituta... 34 3.0
UniRef50_Q4D017 Cluster: A/G-specific adenine glycosylase, putat... 34 3.0
UniRef50_Q5SH32 Cluster: A/G-specific adenine glycosylase; n=2; ... 34 4.0
UniRef50_A7BA81 Cluster: Putative uncharacterized protein; n=1; ... 34 4.0
UniRef50_A5P905 Cluster: Endonuclease III family protein; n=3; E... 34 4.0
UniRef50_A1WUK4 Cluster: HhH-GPD family protein; n=1; Halorhodos... 31 4.9
UniRef50_Q1K3N2 Cluster: HhH-GPD; n=1; Desulfuromonas acetoxidan... 33 5.3
UniRef50_A7DAW0 Cluster: HhH-GPD family protein; n=4; Proteobact... 33 5.3
UniRef50_A1RWH1 Cluster: HhH-GPD family protein; n=1; Thermofilu... 33 5.3
UniRef50_UPI00015BB143 Cluster: HhH-GPD family protein; n=1; Ign... 33 7.0
UniRef50_UPI0000DAE4DF Cluster: hypothetical protein Rgryl_01000... 33 7.0
UniRef50_Q92AX1 Cluster: Lin1797 protein; n=11; Listeria|Rep: Li... 33 7.0
UniRef50_Q6ALY8 Cluster: Probable endonuclease III; n=1; Desulfo... 33 7.0
UniRef50_Q1GD89 Cluster: A/G-specific adenine glycosylase; n=10;... 33 7.0
UniRef50_A7RIG3 Cluster: Predicted protein; n=1; Nematostella ve... 33 7.0
UniRef50_A3LVQ0 Cluster: Predicted protein; n=5; Saccharomycetal... 33 7.0
UniRef50_Q64A66 Cluster: 8-oxoguanine DNA glycosylase; n=1; uncu... 33 7.0
UniRef50_A2SSI3 Cluster: HhH-GPD family protein; n=1; Methanocor... 33 7.0
UniRef50_A6Q9J3 Cluster: Endonuclease III; n=1; Sulfurovum sp. N... 33 9.3
UniRef50_A7QBI8 Cluster: Chromosome chr13 scaffold_74, whole gen... 33 9.3
UniRef50_A7RXJ0 Cluster: Predicted protein; n=1; Nematostella ve... 33 9.3
UniRef50_Q9SJQ6 Cluster: Protein ROS1; n=1; Arabidopsis thaliana... 33 9.3
>UniRef50_Q6NNV1 Cluster: RE40459p; n=2; Drosophila
melanogaster|Rep: RE40459p - Drosophila melanogaster
(Fruit fly)
Length = 391
Score = 132 bits (319), Expect = 8e-30
Identities = 53/71 (74%), Positives = 61/71 (85%)
Frame = +1
Query: 505 QVTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQ 684
++TGIGVD HVHR+ NR+GWV KPTK PE+TR+AL+ WLPF WSEVN L VGFGQTIC
Sbjct: 304 KITGIGVDVHVHRLSNRLGWVPKPTKEPEQTRVALEKWLPFSLWSEVNHLFVGFGQTICT 363
Query: 685 PIKPNCGECLN 717
P+KPNCGECLN
Sbjct: 364 PVKPNCGECLN 374
Score = 101 bits (242), Expect = 2e-20
Identities = 48/83 (57%), Positives = 58/83 (69%)
Frame = +2
Query: 260 AMQRLRARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVE 439
AM RL+ RGLT V M EL L++PV F+K K KY+K+T IL ++Y DIPD+V+
Sbjct: 222 AMNRLKDRGLTPLKVKEMPVTELENLLHPVSFYKNKAKYLKQTVEILTDKYGSDIPDNVK 281
Query: 440 KLCKLNGVGPKMAHICMKVAWNK 508
L L GVGPKMAHICM VAWNK
Sbjct: 282 DLVALPGVGPKMAHICMAVAWNK 304
>UniRef50_A0ZT94 Cluster: Escherichia coli endonuclease III-like 1;
n=9; Coelomata|Rep: Escherichia coli endonuclease
III-like 1 - Gallus gallus (Chicken)
Length = 281
Score = 131 bits (317), Expect = 1e-29
Identities = 61/94 (64%), Positives = 75/94 (79%), Gaps = 1/94 (1%)
Frame = +2
Query: 260 AMQRLRARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVE 439
AM RLR RGLTVD++L M D LGQ+IYPVGFW+ KVKYIK+TT ILK++Y GDIP +VE
Sbjct: 119 AMLRLRQRGLTVDSILQMDDATLGQIIYPVGFWRNKVKYIKQTTAILKQKYGGDIPGTVE 178
Query: 440 KLCKLNGVGPKMAHICMKVAWNK-SLESVLTHMY 538
+L KL GVGPKMAH+ M +AWN S +V TH++
Sbjct: 179 ELVKLPGVGPKMAHLAMNIAWNSVSGIAVDTHVH 212
Score = 109 bits (263), Expect = 5e-23
Identities = 46/70 (65%), Positives = 54/70 (77%)
Frame = +1
Query: 508 VTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQP 687
V+GI VDTHVHRI NR+ WVKK T+ PEETR+AL+ WLP + W E+N LLVGFGQ C P
Sbjct: 202 VSGIAVDTHVHRITNRLKWVKKETRYPEETRVALEDWLPRDLWREINWLLVGFGQQTCLP 261
Query: 688 IKPNCGECLN 717
+ P C ECLN
Sbjct: 262 VNPRCKECLN 271
Score = 35.9 bits (79), Expect = 1.00
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +3
Query: 192 VYRYQCLVSLMLSSQTKDQV 251
V RYQ L+SLMLSSQTKDQV
Sbjct: 96 VMRYQVLLSLMLSSQTKDQV 115
>UniRef50_P78549 Cluster: Endonuclease III-like protein 1; n=15;
Bilateria|Rep: Endonuclease III-like protein 1 - Homo
sapiens (Human)
Length = 312
Score = 123 bits (296), Expect = 5e-27
Identities = 59/94 (62%), Positives = 73/94 (77%), Gaps = 1/94 (1%)
Frame = +2
Query: 260 AMQRLRARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVE 439
AMQRLRARGLTVD++L D LG+LIYPVGFW++KVKYIK+T+ IL++ Y GDIP SV
Sbjct: 150 AMQRLRARGLTVDSILQTDDATLGKLIYPVGFWRSKVKYIKQTSAILQQHYGGDIPASVA 209
Query: 440 KLCKLNGVGPKMAHICMKVAWNK-SLESVLTHMY 538
+L L GVGPKMAH+ M VAW S +V TH++
Sbjct: 210 ELVALPGVGPKMAHLAMAVAWGTVSGIAVDTHVH 243
Score = 109 bits (262), Expect = 7e-23
Identities = 46/70 (65%), Positives = 52/70 (74%)
Frame = +1
Query: 508 VTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQP 687
V+GI VDTHVHRI NR+ W KK TK+PEETR AL+ WLP E W E+N LLVGFGQ C P
Sbjct: 233 VSGIAVDTHVHRIANRLRWTKKATKSPEETRAALEEWLPRELWHEINGLLVGFGQQTCLP 292
Query: 688 IKPNCGECLN 717
+ P C CLN
Sbjct: 293 VHPRCHACLN 302
Score = 35.5 bits (78), Expect = 1.3
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +3
Query: 192 VYRYQCLVSLMLSSQTKDQV 251
V RYQ L+SLMLSSQTKDQV
Sbjct: 127 VRRYQVLLSLMLSSQTKDQV 146
>UniRef50_Q17E62 Cluster: Endonuclease iii; n=3; Eumetazoa|Rep:
Endonuclease iii - Aedes aegypti (Yellowfever mosquito)
Length = 396
Score = 122 bits (293), Expect = 1e-26
Identities = 52/70 (74%), Positives = 56/70 (80%)
Frame = +1
Query: 508 VTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQP 687
VTGIGVDTHVHRICN + WV K TKTPE+TR+AL+ WLPFE W EVN LLVGFGQTIC
Sbjct: 299 VTGIGVDTHVHRICNWLQWVPKQTKTPEDTRVALEKWLPFELWEEVNQLLVGFGQTICPA 358
Query: 688 IKPNCGECLN 717
P C ECLN
Sbjct: 359 TNPYCNECLN 368
Score = 101 bits (241), Expect = 2e-20
Identities = 45/81 (55%), Positives = 61/81 (75%)
Frame = +2
Query: 263 MQRLRARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEK 442
MQRLR GLT +NV++ L +LIYPV F+K K K+IK+++ IL + Y+GDIPD+++
Sbjct: 217 MQRLRKHGLTPENVVATDVAVLEKLIYPVSFYKNKAKFIKQSSQILLDSYDGDIPDTIDG 276
Query: 443 LCKLNGVGPKMAHICMKVAWN 505
L KL GVG KMAH+CM+ AWN
Sbjct: 277 LLKLPGVGKKMAHLCMRSAWN 297
Score = 36.7 bits (81), Expect = 0.57
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = +3
Query: 192 VYRYQCLVSLMLSSQTKDQVN 254
+ RY LVSLMLSSQTKDQVN
Sbjct: 193 IRRYHTLVSLMLSSQTKDQVN 213
>UniRef50_UPI00015558FC Cluster: PREDICTED: similar to Nth
endonuclease III-like 1 (E. coli); n=1; Ornithorhynchus
anatinus|Rep: PREDICTED: similar to Nth endonuclease
III-like 1 (E. coli) - Ornithorhynchus anatinus
Length = 262
Score = 118 bits (284), Expect = 1e-25
Identities = 56/94 (59%), Positives = 73/94 (77%), Gaps = 1/94 (1%)
Frame = +2
Query: 260 AMQRLRARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVE 439
AM+RL+A GL+VD VL M D LG+LIYPVGFWK+KV++IK+TT ILK++Y GDIP +V
Sbjct: 140 AMRRLQAHGLSVDGVLRMDDATLGRLIYPVGFWKSKVRFIKQTTAILKDRYRGDIPATVA 199
Query: 440 KLCKLNGVGPKMAHICMKVAWNK-SLESVLTHMY 538
L +L GVGPKMAH+ M +AW S +V TH++
Sbjct: 200 GLLQLPGVGPKMAHLAMAIAWGAVSGIAVDTHVH 233
Score = 62.9 bits (146), Expect = 8e-09
Identities = 25/39 (64%), Positives = 31/39 (79%)
Frame = +1
Query: 508 VTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLP 624
V+GI VDTHVHRI NR+ W + TK+PE+TR AL+ WLP
Sbjct: 223 VSGIAVDTHVHRIANRLQWTQTETKSPEQTRAALEDWLP 261
Score = 35.9 bits (79), Expect = 1.00
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +3
Query: 192 VYRYQCLVSLMLSSQTKDQV 251
V RYQ L+SLMLSSQTKDQV
Sbjct: 117 VQRYQVLLSLMLSSQTKDQV 136
>UniRef50_Q4RZY3 Cluster: Chromosome 18 SCAF14786, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 18
SCAF14786, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 293
Score = 114 bits (275), Expect = 2e-24
Identities = 47/83 (56%), Positives = 67/83 (80%)
Frame = +2
Query: 260 AMQRLRARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVE 439
AM++LRA G TV+N+L+ ++E LG+LIYPVGFW+ K +Y+K T+ +L+ ++ GDIPDSVE
Sbjct: 89 AMRKLRAHGCTVENILATNEETLGRLIYPVGFWRNKARYLKLTSAMLQTEFGGDIPDSVE 148
Query: 440 KLCKLNGVGPKMAHICMKVAWNK 508
L +L GVGPKMAH+ M +AW +
Sbjct: 149 GLVRLPGVGPKMAHLAMDIAWGQ 171
Score = 35.1 bits (77), Expect = 1.7
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +3
Query: 192 VYRYQCLVSLMLSSQTKDQV 251
V R+Q LVSLMLSSQTKDQV
Sbjct: 66 VKRFQVLVSLMLSSQTKDQV 85
>UniRef50_Q8X0U3 Cluster: Related to DNA repair protein NTG1; n=3;
Pezizomycotina|Rep: Related to DNA repair protein NTG1 -
Neurospora crassa
Length = 835
Score = 110 bits (264), Expect = 4e-23
Identities = 46/69 (66%), Positives = 54/69 (78%)
Frame = +1
Query: 505 QVTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQ 684
+V GIGVD HVHRI N GW PTKTPEETRLALQSWLP ++W E+N LLVGFGQ++C
Sbjct: 357 RVEGIGVDVHVHRITNLWGWQNPPTKTPEETRLALQSWLPRDKWKEINWLLVGFGQSVCL 416
Query: 685 PIKPNCGEC 711
P+ CG+C
Sbjct: 417 PVGRKCGDC 425
Score = 83.4 bits (197), Expect = 5e-15
Identities = 40/99 (40%), Positives = 62/99 (62%), Gaps = 2/99 (2%)
Frame = +2
Query: 284 GLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGV 463
GL ++N+L++ L +LI VGF K +Y+K+ IL+++YN DIPD++E L L GV
Sbjct: 281 GLNLENMLAVEPAVLNELIGKVGFHNNKTRYLKQAAEILRDRYNSDIPDTIEGLMSLPGV 340
Query: 464 GPKMAHICMKV--AWNKSLESVLTHMYIGYAIGLDGSKN 574
GPKMAH+CM WN+ +E + +++ L G +N
Sbjct: 341 GPKMAHLCMSADNGWNR-VEGIGVDVHVHRITNLWGWQN 378
>UniRef50_Q54ZV6 Cluster: Puative endonuclease III; n=3;
Eukaryota|Rep: Puative endonuclease III - Dictyostelium
discoideum AX4
Length = 349
Score = 105 bits (252), Expect = 1e-21
Identities = 46/70 (65%), Positives = 52/70 (74%)
Frame = +1
Query: 505 QVTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQ 684
+V GI VD H+HRI NR+GWVK TKTPEET L+SWLP E W+ VN LLVGFGQTIC
Sbjct: 257 RVEGIAVDVHMHRISNRLGWVK--TKTPEETMKDLESWLPKENWATVNHLLVGFGQTICS 314
Query: 685 PIKPNCGECL 714
P+ P C CL
Sbjct: 315 PVNPKCSNCL 324
Score = 91.1 bits (216), Expect = 3e-17
Identities = 39/83 (46%), Positives = 60/83 (72%)
Frame = +2
Query: 260 AMQRLRARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVE 439
A+ RL+ GLTVD +L++ EL L+YPVGF+K K Y+KK ILK +YNGDIP + +
Sbjct: 175 AVVRLKEYGLTVDKMLTIDTNELETLLYPVGFYKRKAIYLKKIAEILKNKYNGDIPPTFK 234
Query: 440 KLCKLNGVGPKMAHICMKVAWNK 508
++ +L G+GPKM ++ +++AW +
Sbjct: 235 EIEQLPGIGPKMTNLIVQIAWGR 257
>UniRef50_Q53LY1 Cluster: Endonuclease III homologue; n=5; Oryza
sativa|Rep: Endonuclease III homologue - Oryza sativa
subsp. japonica (Rice)
Length = 373
Score = 103 bits (246), Expect = 6e-21
Identities = 43/71 (60%), Positives = 54/71 (76%), Gaps = 5/71 (7%)
Frame = +1
Query: 514 GIGVDTHVHRICNRIGWV-----KKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTI 678
GI VDTHVHRI NR+GWV K+ T TPE+TR++L+ WLP ++W +NPLLVGFGQTI
Sbjct: 266 GICVDTHVHRISNRLGWVFREGTKQKTTTPEQTRMSLEKWLPKDEWEPINPLLVGFGQTI 325
Query: 679 CQPIKPNCGEC 711
C P++P C C
Sbjct: 326 CTPLRPKCDMC 336
Score = 84.6 bits (200), Expect = 2e-15
Identities = 43/95 (45%), Positives = 62/95 (65%), Gaps = 2/95 (2%)
Frame = +2
Query: 260 AMQRLRARGLTVDNVLSMSDEE-LGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSV 436
A++RL +GL + + +DE L LI PVGF++ K K+IK+ + I E++ GDIPDS+
Sbjct: 180 AVERLSEKGLLDPDAIVRTDEATLANLIKPVGFYQRKAKFIKEASKICLERFGGDIPDSL 239
Query: 437 EKLCKLNGVGPKMAHICMKVAW-NKSLESVLTHMY 538
+L L GVGPKMAH+ M +AW N V TH++
Sbjct: 240 NELLALKGVGPKMAHLVMSIAWKNTQGICVDTHVH 274
>UniRef50_Q4WIP5 Cluster: DNA repair protein Ntg1, putative; n=4;
Trichocomaceae|Rep: DNA repair protein Ntg1, putative -
Aspergillus fumigatus (Sartorya fumigata)
Length = 432
Score = 101 bits (243), Expect = 1e-20
Identities = 44/66 (66%), Positives = 51/66 (77%)
Frame = +1
Query: 514 GIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIK 693
GIGVD HVHRI N GW K TKTPEETR+AL+SWLP ++W E+N LLVG GQT+C P+
Sbjct: 322 GIGVDVHVHRITNLWGWHK--TKTPEETRMALESWLPRDKWHEINKLLVGLGQTVCLPVG 379
Query: 694 PNCGEC 711
CGEC
Sbjct: 380 RRCGEC 385
Score = 94.7 bits (225), Expect = 2e-18
Identities = 43/85 (50%), Positives = 58/85 (68%)
Frame = +2
Query: 254 LTAMQRLRARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDS 433
L + Q L+ L ++N+L++S E+L +LI VGF K KYIK IL++QYN DIP +
Sbjct: 235 LKSSQPLKDSTLNLENILAVSPEKLNELIRTVGFHNNKTKYIKAAAEILRDQYNSDIPST 294
Query: 434 VEKLCKLNGVGPKMAHICMKVAWNK 508
E+L KL GVGPKMA++CM AW K
Sbjct: 295 AEELMKLPGVGPKMAYLCMSAAWGK 319
>UniRef50_Q4QI30 Cluster: Endonuclease III, putative; n=7;
Trypanosomatidae|Rep: Endonuclease III, putative -
Leishmania major
Length = 257
Score = 101 bits (241), Expect = 2e-20
Identities = 41/69 (59%), Positives = 49/69 (71%)
Frame = +1
Query: 505 QVTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQ 684
+V GIGVDTHVHRI R WV KTPE+TR AL+SWLP E W +N L+VG GQT+C
Sbjct: 152 RVIGIGVDTHVHRISQRYRWVPSTVKTPEDTRKALESWLPREHWGTINSLMVGLGQTVCT 211
Query: 685 PIKPNCGEC 711
P++P C C
Sbjct: 212 PLRPKCDIC 220
Score = 64.1 bits (149), Expect = 3e-09
Identities = 37/94 (39%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Frame = +2
Query: 260 AMQRLRARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVE 439
AM L R LTV +V +M++ EL + I VGF TK + IK+ IL + Y+G +P
Sbjct: 70 AMDTLIKRELTVQSVHAMTETELDKHICKVGFHNTKARNIKEVAAILMKNYDGKVPREYA 129
Query: 440 KLCKLNGVGPKMAHICMKVAWNKSLE-SVLTHMY 538
+L L GVGPKMA++ + A ++ + V TH++
Sbjct: 130 ELIALPGVGPKMANLFFQDADHRVIGIGVDTHVH 163
>UniRef50_A6RC36 Cluster: Putative uncharacterized protein; n=1;
Ajellomyces capsulatus NAm1|Rep: Putative
uncharacterized protein - Ajellomyces capsulatus NAm1
Length = 532
Score = 101 bits (241), Expect = 2e-20
Identities = 44/66 (66%), Positives = 50/66 (75%)
Frame = +1
Query: 514 GIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIK 693
GIGVD HVHRI N GW K TKTPEETR AL+SWLP ++W E+N LLVG GQT+C P+
Sbjct: 423 GIGVDVHVHRITNLWGWHK--TKTPEETRAALESWLPKDKWHEINKLLVGLGQTVCLPVA 480
Query: 694 PNCGEC 711
CGEC
Sbjct: 481 RRCGEC 486
Score = 83.4 bits (197), Expect = 5e-15
Identities = 37/74 (50%), Positives = 51/74 (68%)
Frame = +2
Query: 287 LTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVG 466
LT++N+L++ L +LI VGF K KYIK IL+++YN DIP +VE L +L GVG
Sbjct: 347 LTLENILAVKPARLNELIQSVGFHNNKTKYIKAAAIILRDEYNFDIPPTVEGLMRLPGVG 406
Query: 467 PKMAHICMKVAWNK 508
PKMA++CM AW +
Sbjct: 407 PKMAYLCMSSAWGR 420
>UniRef50_A2QUZ6 Cluster: Contig An10c0030, complete genome; n=1;
Aspergillus niger|Rep: Contig An10c0030, complete genome
- Aspergillus niger
Length = 390
Score = 100 bits (239), Expect = 4e-20
Identities = 43/66 (65%), Positives = 50/66 (75%)
Frame = +1
Query: 514 GIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIK 693
GIGVD HVHRI N GW K TK PEETR+AL+SWLP ++W E+N LLVG GQT+C P+
Sbjct: 291 GIGVDVHVHRITNLWGWHK--TKNPEETRMALESWLPKDKWHEINKLLVGLGQTVCLPVA 348
Query: 694 PNCGEC 711
CGEC
Sbjct: 349 RRCGEC 354
Score = 85.4 bits (202), Expect = 1e-15
Identities = 42/87 (48%), Positives = 55/87 (63%), Gaps = 4/87 (4%)
Frame = +2
Query: 260 AMQRLRAR----GLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIP 427
AMQRL L ++N+L+++ E L +LI VGF K KYIK IL++QY+ DIP
Sbjct: 202 AMQRLHTELGDHTLNLENILAVTPERLNELIAKVGFHNNKTKYIKAAAIILRDQYDSDIP 261
Query: 428 DSVEKLCKLNGVGPKMAHICMKVAWNK 508
+ +L KL GVGPKMA +CM AW K
Sbjct: 262 STAPELMKLPGVGPKMAFLCMSAAWGK 288
>UniRef50_Q5KDK4 Cluster: DNA-(Apurinic or apyrimidinic site) lyase,
putative; n=1; Filobasidiella neoformans|Rep:
DNA-(Apurinic or apyrimidinic site) lyase, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 452
Score = 99.1 bits (236), Expect = 9e-20
Identities = 42/67 (62%), Positives = 48/67 (71%)
Frame = +1
Query: 514 GIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIK 693
GIGVD HVHRI NR+ W + PT TPE+TRL LQSWLP +NPL+VGFGQ IC P+
Sbjct: 271 GIGVDVHVHRITNRLKWHRPPTSTPEQTRLNLQSWLPPHLHKPINPLMVGFGQVICLPVG 330
Query: 694 PNCGECL 714
P C CL
Sbjct: 331 PRCDICL 337
Score = 68.1 bits (159), Expect = 2e-10
Identities = 40/129 (31%), Positives = 66/129 (51%), Gaps = 3/129 (2%)
Frame = +2
Query: 128 CVSNNIHNHTHPNLYILKLLIGVQISMLSFSDAIKPNQGPS*LTAMQRLRARGLTVDNVL 307
C + P + +LI + +S + DA+ +T++ GL+ ++
Sbjct: 144 CERPRTNTEGDPKTFRFHILISLMLSSQT-KDAVTSAA----VTSLHTSLPGGLSAASLA 198
Query: 308 SMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYN---GDIPDSVEKLCKLNGVGPKMA 478
+ E + + I VGFW+ K +YI++ L EQ GD+P +VE LCKL GVGPKMA
Sbjct: 199 AAPLETIQECINKVGFWRRKAEYIQEAAKTLLEQEGDEKGDVPKTVEGLCKLKGVGPKMA 258
Query: 479 HICMKVAWN 505
+ ++ AW+
Sbjct: 259 FLALQCAWD 267
>UniRef50_A7E6E2 Cluster: Putative uncharacterized protein; n=2;
Pezizomycotina|Rep: Putative uncharacterized protein -
Sclerotinia sclerotiorum 1980
Length = 437
Score = 98.7 bits (235), Expect = 1e-19
Identities = 45/66 (68%), Positives = 48/66 (72%)
Frame = +1
Query: 514 GIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIK 693
GIGVD HVHRI N GW TK PEETRLALQ+WLP E W E+N LLVGFGQTIC P+
Sbjct: 278 GIGVDVHVHRITNMWGW--HTTKGPEETRLALQAWLPKELWHEINWLLVGFGQTICLPVG 335
Query: 694 PNCGEC 711
CG C
Sbjct: 336 KKCGSC 341
Score = 95.1 bits (226), Expect = 2e-18
Identities = 45/98 (45%), Positives = 66/98 (67%)
Frame = +2
Query: 218 SDAIKPNQGPS*LTAMQRLRARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGI 397
++A+ N+ + L A + GLT+DN+L++ + L +LI+ VGF K KYIK I
Sbjct: 179 TNAVAMNRLYTELPAYKEGAPIGLTLDNILAVDPKLLNELIWVVGFHNNKTKYIKAAAEI 238
Query: 398 LKEQYNGDIPDSVEKLCKLNGVGPKMAHICMKVAWNKS 511
LK+Q+NGDIPD++E L L GVGPKMA++CM AW ++
Sbjct: 239 LKDQWNGDIPDTIEGLMSLPGVGPKMAYLCMSSAWGRT 276
>UniRef50_Q4P6P8 Cluster: Putative uncharacterized protein; n=2;
Fungi/Metazoa group|Rep: Putative uncharacterized
protein - Ustilago maydis (Smut fungus)
Length = 516
Score = 98.3 bits (234), Expect = 2e-19
Identities = 44/66 (66%), Positives = 50/66 (75%)
Frame = +1
Query: 514 GIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIK 693
GIGVDTHVHR+ NR+GW K TKTPEETRL LQSWLP + + +N LLVGFGQ IC P+
Sbjct: 391 GIGVDTHVHRLTNRLGWHK--TKTPEETRLNLQSWLPTQLHANINRLLVGFGQVICVPVG 448
Query: 694 PNCGEC 711
P C C
Sbjct: 449 PRCDLC 454
Score = 69.3 bits (162), Expect = 9e-11
Identities = 30/76 (39%), Positives = 46/76 (60%)
Frame = +2
Query: 263 MQRLRARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEK 442
+QR GL + ++L +E + Q I VGFW+ K Y+K IL + + GD+P +V++
Sbjct: 308 LQRTLPNGLCLQSLLDADNEMISQCISKVGFWRRKTGYLKSAARILADDFQGDVPRTVDE 367
Query: 443 LCKLNGVGPKMAHICM 490
L L GVGPKMA + +
Sbjct: 368 LVSLPGVGPKMAFLAL 383
>UniRef50_Q2U8L6 Cluster: Endonuclease III; n=4; Pezizomycotina|Rep:
Endonuclease III - Aspergillus oryzae
Length = 269
Score = 97.9 bits (233), Expect = 2e-19
Identities = 42/66 (63%), Positives = 50/66 (75%)
Frame = +1
Query: 514 GIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIK 693
GIGVD HVHRI N GW K TKTPE+TR AL+SWLP ++W E+N LLVG GQT+C P+
Sbjct: 167 GIGVDVHVHRITNLWGWNK--TKTPEDTRKALESWLPKDKWHEINKLLVGLGQTVCLPVG 224
Query: 694 PNCGEC 711
CG+C
Sbjct: 225 RKCGDC 230
Score = 85.4 bits (202), Expect = 1e-15
Identities = 40/79 (50%), Positives = 52/79 (65%)
Frame = +2
Query: 272 LRARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCK 451
LR L ++N+L++S E L +LI VGF K KYIK IL++QY DIP + E+L K
Sbjct: 86 LRDSTLNLENILAVSPERLNELIGKVGFHNNKTKYIKAAAIILRDQYQSDIPSTAEELMK 145
Query: 452 LNGVGPKMAHICMKVAWNK 508
L GVG KMA++CM AW K
Sbjct: 146 LPGVGLKMAYLCMSAAWGK 164
>UniRef50_Q9MA35 Cluster: T20M3.18 protein; n=8; core
eudicotyledons|Rep: T20M3.18 protein - Arabidopsis
thaliana (Mouse-ear cress)
Length = 402
Score = 97.1 bits (231), Expect = 4e-19
Identities = 48/89 (53%), Positives = 56/89 (62%), Gaps = 21/89 (23%)
Frame = +1
Query: 508 VTGIGVDTHVHRICNRIGWVKKP---------------------TKTPEETRLALQSWLP 624
V GI VDTHVHRICNR+GWV KP T +PEETR+ALQ WLP
Sbjct: 285 VQGICVDTHVHRICNRLGWVSKPGTKQFAYLLLVTYLYFVLDQKTSSPEETRVALQQWLP 344
Query: 625 FEQWSEVNPLLVGFGQTICQPIKPNCGEC 711
+W +N LLVGFGQTIC P++P+CG C
Sbjct: 345 KGEWVAINFLLVGFGQTICTPLRPHCGTC 373
Score = 80.2 bits (189), Expect = 5e-14
Identities = 37/83 (44%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Frame = +2
Query: 260 AMQRLRARGLTVDNVLSMSDEE-LGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSV 436
A++RL GL + +DE + +LIYPVGF+ K +KK I +Y+GDIP ++
Sbjct: 201 AVERLHQNGLLTPEAIDKADESTIKELIYPVGFYTRKATNVKKVAKICLMEYDGDIPRTL 260
Query: 437 EKLCKLNGVGPKMAHICMKVAWN 505
E+L L GVGPK+AH+ + VAWN
Sbjct: 261 EELLSLPGVGPKIAHLVLHVAWN 283
>UniRef50_Q1EB53 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 451
Score = 96.7 bits (230), Expect = 5e-19
Identities = 42/66 (63%), Positives = 50/66 (75%)
Frame = +1
Query: 514 GIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIK 693
GIGVD HVHRI N GWV+ TKTPEETR+ L++WLP E+W E+N LLVG GQT+C P+
Sbjct: 352 GIGVDVHVHRITNLWGWVR--TKTPEETRVLLEAWLPREKWREINWLLVGLGQTVCLPVG 409
Query: 694 PNCGEC 711
C EC
Sbjct: 410 RRCWEC 415
Score = 79.8 bits (188), Expect = 6e-14
Identities = 36/72 (50%), Positives = 45/72 (62%)
Frame = +2
Query: 287 LTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVG 466
LT+ N+L +S L QLI VGF K KY++ T IL+ YN DIP + L L GVG
Sbjct: 276 LTISNILRVSATRLNQLIQTVGFHNLKTKYLRSTASILQSHYNSDIPRTAADLMALPGVG 335
Query: 467 PKMAHICMKVAW 502
PKMA++CM AW
Sbjct: 336 PKMAYLCMSSAW 347
>UniRef50_P54137 Cluster: Probable endonuclease III homolog (EC
4.2.99.18) (DNA-(Apurinic or apyrimidinic site) lyase);
n=2; Caenorhabditis|Rep: Probable endonuclease III
homolog (EC 4.2.99.18) (DNA-(Apurinic or apyrimidinic
site) lyase) - Caenorhabditis elegans
Length = 259
Score = 96.7 bits (230), Expect = 5e-19
Identities = 41/70 (58%), Positives = 51/70 (72%)
Frame = +1
Query: 505 QVTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQ 684
+ GI VDTHVHRI NR+GW+K T TPE+T+ AL+ LP +W +N LLVGFGQ CQ
Sbjct: 131 ECVGIAVDTHVHRISNRLGWIK--TSTPEKTQKALEILLPKSEWQPINHLLVGFGQMQCQ 188
Query: 685 PIKPNCGECL 714
P++P CG CL
Sbjct: 189 PVRPKCGTCL 198
Score = 94.7 bits (225), Expect = 2e-18
Identities = 42/94 (44%), Positives = 67/94 (71%), Gaps = 1/94 (1%)
Frame = +2
Query: 260 AMQRLRARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVE 439
AM+RL+ GL++ +L +L ++ PVGF+K K Y++KT ILK+ ++GDIPDS++
Sbjct: 49 AMKRLKDHGLSIGKILEFKVPDLETILCPVGFYKRKAVYLQKTAKILKDDFSGDIPDSLD 108
Query: 440 KLCKLNGVGPKMAHICMKVAWNKSLE-SVLTHMY 538
LC L GVGPKMA++ M++AW + + +V TH++
Sbjct: 109 GLCALPGVGPKMANLVMQIAWGECVGIAVDTHVH 142
Score = 35.5 bits (78), Expect = 1.3
Identities = 15/21 (71%), Positives = 20/21 (95%)
Frame = +3
Query: 192 VYRYQCLVSLMLSSQTKDQVN 254
V+R+Q LV+LMLSSQT+D+VN
Sbjct: 26 VHRFQVLVALMLSSQTRDEVN 46
>UniRef50_Q0UCF2 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 426
Score = 96.3 bits (229), Expect = 7e-19
Identities = 42/66 (63%), Positives = 50/66 (75%)
Frame = +1
Query: 514 GIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIK 693
GIGVD HVHRI N GW K T+TPE+TR AL+SWLP ++W ++N LLVG GQTIC P+
Sbjct: 269 GIGVDVHVHRITNLWGWNK--TQTPEQTRAALESWLPRDKWHDINNLLVGHGQTICLPVG 326
Query: 694 PNCGEC 711
CGEC
Sbjct: 327 RKCGEC 332
Score = 81.4 bits (192), Expect = 2e-14
Identities = 37/82 (45%), Positives = 53/82 (64%)
Frame = +2
Query: 263 MQRLRARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEK 442
MQ G +++VL++ +L +I VGF K KYIK T IL+++++G+IPDS+E
Sbjct: 185 MQENMPGGFNLESVLALPPPDLNAMINKVGFHNLKTKYIKATAEILRDKFDGEIPDSIEG 244
Query: 443 LCKLNGVGPKMAHICMKVAWNK 508
L L GVGPKMA++ M AW K
Sbjct: 245 LVSLPGVGPKMAYLTMSAAWGK 266
>UniRef50_A3LQB2 Cluster: Endonuclease III; n=3;
Saccharomycetaceae|Rep: Endonuclease III - Pichia
stipitis (Yeast)
Length = 382
Score = 95.9 bits (228), Expect = 9e-19
Identities = 38/67 (56%), Positives = 47/67 (70%)
Frame = +1
Query: 511 TGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPI 690
+GIGVD H+HR+ W K KTPE TR+ L+ WLP + W+++NPLLVGFGQTIC P
Sbjct: 273 SGIGVDVHLHRLAQMWSWTSKNAKTPEHTRVELEDWLPPKYWADINPLLVGFGQTICVPR 332
Query: 691 KPNCGEC 711
PNC C
Sbjct: 333 APNCDIC 339
Score = 64.9 bits (151), Expect = 2e-09
Identities = 27/73 (36%), Positives = 46/73 (63%)
Frame = +2
Query: 284 GLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGV 463
GL ++ +L ++++EL I VGF K YIK+ +L++ + DIP ++E + L GV
Sbjct: 197 GLCIEALLELTEKELDDYICKVGFHNRKAGYIKRACEMLRDNFQSDIPSTIEDVVTLPGV 256
Query: 464 GPKMAHICMKVAW 502
GPKM ++ ++ AW
Sbjct: 257 GPKMGYLLLQNAW 269
Score = 41.9 bits (94), Expect = 0.015
Identities = 19/33 (57%), Positives = 25/33 (75%)
Frame = +3
Query: 192 VYRYQCLVSLMLSSQTKDQVNLLLCRGFGLGVL 290
+YR+Q L+SLMLSSQTKD+VN L + G+L
Sbjct: 158 IYRFQLLISLMLSSQTKDEVNYLAMKTMHEGLL 190
>UniRef50_Q4N0H4 Cluster: Endonuclease III, putative; n=3;
Piroplasmida|Rep: Endonuclease III, putative - Theileria
parva
Length = 418
Score = 95.5 bits (227), Expect = 1e-18
Identities = 43/68 (63%), Positives = 48/68 (70%)
Frame = +1
Query: 508 VTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQP 687
V G+ VD HVHRI NR+GWVK TKTPEET L LQ LP + WS++NPLLVGFGQT C
Sbjct: 336 VDGVAVDIHVHRITNRLGWVK--TKTPEETSLKLQELLPKDLWSKINPLLVGFGQTFCTA 393
Query: 688 IKPNCGEC 711
P C C
Sbjct: 394 AGPGCPTC 401
Score = 91.5 bits (217), Expect = 2e-17
Identities = 42/81 (51%), Positives = 58/81 (71%)
Frame = +2
Query: 263 MQRLRARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEK 442
M+ L+ RGLT+DN+L M +EEL +I VGF KTK K IKK ILK+QY G +P + +
Sbjct: 254 MKNLKKRGLTLDNILKMDEEELDSIISKVGFHKTKAKNIKKAAQILKDQYGGKVPSNKKD 313
Query: 443 LCKLNGVGPKMAHICMKVAWN 505
L L G+GPKMA++ ++VA+N
Sbjct: 314 LESLPGIGPKMANLILQVAFN 334
>UniRef50_Q6C305 Cluster: Yarrowia lipolytica chromosome F of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome F of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 483
Score = 91.5 bits (217), Expect = 2e-17
Identities = 39/67 (58%), Positives = 47/67 (70%)
Frame = +1
Query: 514 GIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIK 693
GIGVD HVHR+ N GWVK KTPEE+R+ L+ WLP E W ++NP LVGFGQT+C
Sbjct: 381 GIGVDVHVHRLANMWGWVKG--KTPEESRVQLEKWLPQELWVDINPTLVGFGQTVCPSKG 438
Query: 694 PNCGECL 714
CG C+
Sbjct: 439 KKCGVCI 445
Score = 70.9 bits (166), Expect = 3e-11
Identities = 33/72 (45%), Positives = 44/72 (61%)
Frame = +2
Query: 287 LTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVG 466
L+VD +LSMS E+ I VGF K YI + T +L + + GDIP ++ + L GVG
Sbjct: 305 LSVDGILSMSVGEIDGCISKVGFHNRKADYISRATALLVKDFGGDIPPTIAAMTSLPGVG 364
Query: 467 PKMAHICMKVAW 502
PKMAH+ M AW
Sbjct: 365 PKMAHLLMHRAW 376
Score = 33.9 bits (74), Expect = 4.0
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = +3
Query: 192 VYRYQCLVSLMLSSQTKDQV 251
V R+Q L+SLMLSSQTKD+V
Sbjct: 267 VQRFQLLISLMLSSQTKDEV 286
>UniRef50_A5AXK0 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 377
Score = 91.1 bits (216), Expect = 3e-17
Identities = 43/73 (58%), Positives = 51/73 (69%), Gaps = 5/73 (6%)
Frame = +1
Query: 508 VTGIGVDTHVHRICNRIGWV-----KKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQ 672
V GI VDTHVHRICNR+GWV K+ T +PEETR +LQ WLP E+W +NPLL
Sbjct: 281 VQGICVDTHVHRICNRLGWVSRRGTKQKTSSPEETRESLQLWLPKEEWVPINPLL----- 335
Query: 673 TICQPIKPNCGEC 711
TIC P++P CG C
Sbjct: 336 TICTPLRPXCGVC 348
Score = 84.2 bits (199), Expect = 3e-15
Identities = 41/83 (49%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Frame = +2
Query: 260 AMQRLRARGLTVDNVLSMSDEE-LGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSV 436
A+QRL GL V + + +DE + LIYPVGF+ K +KK I +Y+GDIP S+
Sbjct: 197 AIQRLLQNGLLVADAIDKADEATIKSLIYPVGFYSRKAANLKKIAKICLMKYDGDIPSSL 256
Query: 437 EKLCKLNGVGPKMAHICMKVAWN 505
E+L L G+GPKMAH+ M VAWN
Sbjct: 257 EELLLLPGIGPKMAHLVMNVAWN 279
>UniRef50_Q09907 Cluster: Endonuclease III homolog (EC 4.2.99.18)
(DNA-(apurinic or apyrimidinic site) lyase); n=1;
Schizosaccharomyces pombe|Rep: Endonuclease III homolog
(EC 4.2.99.18) (DNA-(apurinic or apyrimidinic site)
lyase) - Schizosaccharomyces pombe (Fission yeast)
Length = 355
Score = 90.6 bits (215), Expect = 3e-17
Identities = 42/69 (60%), Positives = 46/69 (66%)
Frame = +1
Query: 505 QVTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQ 684
+ GIGVD HVHRICN + W TKT E+TR ALQSWLP E W E+N LVGFGQTIC
Sbjct: 154 KTVGIGVDVHVHRICNLLHWCN--TKTEEQTRAALQSWLPKELWFELNHTLVGFGQTICL 211
Query: 685 PIKPNCGEC 711
P C C
Sbjct: 212 PRGRRCDMC 220
Score = 84.2 bits (199), Expect = 3e-15
Identities = 39/91 (42%), Positives = 60/91 (65%)
Frame = +2
Query: 242 GPS*LTAMQRLRARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGD 421
GP+ ++L A GL ++++ ++ + L +LI VGF K Y+K+ IL E++ GD
Sbjct: 67 GPTMRNLKEKL-AGGLCLEDIQNIDEVSLNKLIEKVGFHNRKTIYLKQMARILSEKFQGD 125
Query: 422 IPDSVEKLCKLNGVGPKMAHICMKVAWNKSL 514
IPD+VE L L GVGPKM ++CM +AWNK++
Sbjct: 126 IPDTVEDLMTLPGVGPKMGYLCMSIAWNKTV 156
>UniRef50_A3FPN4 Cluster: Endonuclease III, putative; n=2;
Cryptosporidium|Rep: Endonuclease III, putative -
Cryptosporidium parvum Iowa II
Length = 189
Score = 89.8 bits (213), Expect = 6e-17
Identities = 39/68 (57%), Positives = 48/68 (70%)
Frame = +1
Query: 508 VTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQP 687
V GI VDTH+HRI NRIGWVK TK P ET ++ LP W+++N + VG+GQTIC+P
Sbjct: 105 VVGISVDTHMHRIFNRIGWVK--TKNPIETSKEMEKMLPRIYWNDINKVFVGYGQTICKP 162
Query: 688 IKPNCGEC 711
I P C EC
Sbjct: 163 INPKCQEC 170
Score = 69.3 bits (162), Expect = 9e-11
Identities = 38/106 (35%), Positives = 65/106 (61%), Gaps = 2/106 (1%)
Frame = +2
Query: 263 MQRLRARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEK 442
M RL GL+ + + + S + L ++Y VGF+ TK K +K+ + I+ + Y+G +P+ E+
Sbjct: 23 MNRLIDNGLSPEFINNQSVDSLRDMLYGVGFYNTKAKNLKEISRIIIQNYSGKVPEKYEQ 82
Query: 443 LCKLNGVGPKMAHICMKVAWNKSLE-SVLTHMY-IGYAIGLDGSKN 574
L L G+GPKMA++ +++ + + SV THM+ I IG +KN
Sbjct: 83 LVMLPGIGPKMANLILQIGFGIVVGISVDTHMHRIFNRIGWVKTKN 128
>UniRef50_A2DNH5 Cluster: HhH-GPD superfamily base excision DNA
repair protein; n=2; Trichomonas vaginalis G3|Rep:
HhH-GPD superfamily base excision DNA repair protein -
Trichomonas vaginalis G3
Length = 239
Score = 88.6 bits (210), Expect = 1e-16
Identities = 43/79 (54%), Positives = 48/79 (60%)
Frame = +1
Query: 475 GTYLYEGCLEQVTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPL 654
GT C + GIGVD HVHRI N +GWVK T P+ET ALQ LP + W EVN
Sbjct: 139 GTLAMARCWNEQIGIGVDVHVHRISNLLGWVK--TNHPDETETALQKVLPKDIWPEVNHC 196
Query: 655 LVGFGQTICQPIKPNCGEC 711
LVGFGQT+C K C EC
Sbjct: 197 LVGFGQTVCGSKKRKCEEC 215
Score = 48.4 bits (110), Expect = 2e-04
Identities = 22/77 (28%), Positives = 38/77 (49%)
Frame = +2
Query: 284 GLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGV 463
G N++ E + I VGF K YI++ E+Y+ D+P ++++ + GV
Sbjct: 75 GFNAPNLMKADRETILSCISCVGFANRKTDYIREAAKRCHEKYDDDVPKTLKEFTEFKGV 134
Query: 464 GPKMAHICMKVAWNKSL 514
G KM + M WN+ +
Sbjct: 135 GIKMGTLAMARCWNEQI 151
Score = 33.5 bits (73), Expect = 5.3
Identities = 14/19 (73%), Positives = 18/19 (94%)
Frame = +3
Query: 195 YRYQCLVSLMLSSQTKDQV 251
+R+Q L+SLMLSSQTKDQ+
Sbjct: 43 HRFQILISLMLSSQTKDQM 61
>UniRef50_Q9P8Q0 Cluster: Ntg1; n=3; Saccharomycetales|Rep: Ntg1 -
Candida albicans (Yeast)
Length = 311
Score = 88.6 bits (210), Expect = 1e-16
Identities = 35/66 (53%), Positives = 44/66 (66%)
Frame = +1
Query: 514 GIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIK 693
GIGVD H+HR+ GWV TPE+ R+ LQ WLP + W+++NPL+VGFGQ IC P
Sbjct: 212 GIGVDVHLHRLALMWGWVSPKANTPEKARIELQEWLPKDYWTDINPLVVGFGQVICVPRA 271
Query: 694 PNCGEC 711
NC C
Sbjct: 272 ANCDIC 277
Score = 79.8 bits (188), Expect = 6e-14
Identities = 40/124 (32%), Positives = 70/124 (56%)
Frame = +2
Query: 131 VSNNIHNHTHPNLYILKLLIGVQISMLSFSDAIKPNQGPS*LTAMQRLRARGLTVDNVLS 310
++ NI +P +Y +LLI + +S + D + + + ++ GL +++VL
Sbjct: 86 INRNIKTR-NPKIYRFQLLISLMLSSQT-KDEVNYEAMKNLHNGLLKVHPDGLCIESVLK 143
Query: 311 MSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGPKMAHICM 490
+S+ E+ I VGF K +YI+KT IL E ++GDIP ++E++ L GVGPKM + +
Sbjct: 144 LSESEIDAYIKKVGFHNRKAQYIRKTCSILMENHDGDIPKTIEEIVALPGVGPKMGFLLL 203
Query: 491 KVAW 502
+ W
Sbjct: 204 QSGW 207
>UniRef50_Q58030 Cluster: Putative endonuclease MJ0613; n=6;
Methanococcales|Rep: Putative endonuclease MJ0613 -
Methanococcus jannaschii
Length = 344
Score = 88.6 bits (210), Expect = 1e-16
Identities = 41/82 (50%), Positives = 59/82 (71%)
Frame = +2
Query: 293 VDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGPK 472
VD++L++ +E+L LIYP GF+K K K +KK ILKE YNG +PDS+E+L KL GVG K
Sbjct: 58 VDDLLNIDEEKLADLIYPAGFYKNKAKNLKKLAKILKENYNGKVPDSLEELLKLPGVGRK 117
Query: 473 MAHICMKVAWNKSLESVLTHMY 538
A++ + +A+NK V TH++
Sbjct: 118 TANLVITLAFNKDGICVDTHVH 139
Score = 69.7 bits (163), Expect = 7e-11
Identities = 35/66 (53%), Positives = 41/66 (62%)
Frame = +1
Query: 514 GIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIK 693
GI VDTHVHRICNR W T+TPEET L+ LP + W +N LLV FG+ IC K
Sbjct: 131 GICVDTHVHRICNR--WEIVDTETPEETEFELRKKLPKKYWKVINNLLVVFGREICSS-K 187
Query: 694 PNCGEC 711
C +C
Sbjct: 188 SKCDKC 193
>UniRef50_Q6FRS5 Cluster: Similar to sp|P31378 Saccharomyces
cerevisiae YAL015c NTG1; n=1; Candida glabrata|Rep:
Similar to sp|P31378 Saccharomyces cerevisiae YAL015c
NTG1 - Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 468
Score = 86.6 bits (205), Expect = 5e-16
Identities = 43/128 (33%), Positives = 77/128 (60%), Gaps = 1/128 (0%)
Frame = +2
Query: 161 PNLYILKLLIGVQISMLSFSDAIKPNQGPS*LTAMQRLR-ARGLTVDNVLSMSDEELGQL 337
P Y L++L+GV +S + + ++ L+ A+G+T+D +L + ++ L +L
Sbjct: 166 PRNYRLQVLVGVMLSAQTKDEVTAMGMYNIMKYCIEELKDAQGITLDALLRIDEQVLDEL 225
Query: 338 IYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGPKMAHICMKVAWNKSLE 517
I+ VGF K K +IK+T IL E+Y+ D+PD+V + L GVGPKM ++ ++ AW K +E
Sbjct: 226 IHSVGFHKRKANFIKRTAAILNEKYDQDVPDNVTDILGLPGVGPKMGYLTLQKAWGK-IE 284
Query: 518 SVLTHMYI 541
+ +++
Sbjct: 285 GICVDVHV 292
Score = 66.5 bits (155), Expect = 6e-10
Identities = 31/59 (52%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Frame = +1
Query: 505 QVTGIGVDTHVHRICNRIGWVKKPT-KTPEETRLALQSWLPFEQWSEVNPLLVGFGQTI 678
++ GI VD HV R+C WV KTP +TR LQ WLP W+E+N LLVGFGQ I
Sbjct: 282 KIEGICVDVHVDRLCKMWKWVDPDKCKTPNDTRKQLQKWLPPRLWTEINGLLVGFGQVI 340
>UniRef50_A5UW97 Cluster: DNA-(Apurinic or apyrimidinic site) lyase;
n=8; Bacteria|Rep: DNA-(Apurinic or apyrimidinic site)
lyase - Roseiflexus sp. RS-1
Length = 219
Score = 85.4 bits (202), Expect = 1e-15
Identities = 39/66 (59%), Positives = 45/66 (68%)
Frame = +1
Query: 514 GIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIK 693
GI VDTHVHRICNR G+V+ T+TPEET + L+ LP E W E+N LLV GQ IC P
Sbjct: 141 GICVDTHVHRICNRWGYVQ--TRTPEETEMRLREILPPEYWKEINGLLVTLGQNICHPTS 198
Query: 694 PNCGEC 711
P C C
Sbjct: 199 PRCSVC 204
Score = 64.1 bits (149), Expect = 3e-09
Identities = 31/90 (34%), Positives = 54/90 (60%)
Frame = +2
Query: 269 RLRARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLC 448
RL A T + +L++ ++E+ LIYPVGF++ K + I+ IL +QY G++P ++ L
Sbjct: 60 RLFAAADTPEKMLALGEDEIAALIYPVGFYRNKARTIRTICQILIDQYGGEVPADLDALL 119
Query: 449 KLNGVGPKMAHICMKVAWNKSLESVLTHMY 538
L GVG K A++ + ++ V TH++
Sbjct: 120 ALPGVGRKTANLVLTAGFDLPGICVDTHVH 149
>UniRef50_Q22BE5 Cluster: HhH-GPD superfamily base excision DNA
repair protein; n=1; Tetrahymena thermophila SB210|Rep:
HhH-GPD superfamily base excision DNA repair protein -
Tetrahymena thermophila SB210
Length = 371
Score = 85.4 bits (202), Expect = 1e-15
Identities = 37/69 (53%), Positives = 48/69 (69%)
Frame = +1
Query: 505 QVTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQ 684
+ GI VDTHVHRI NR+ WV TKTPE+TR+ L+ L + W +VN LLVG+GQ++C+
Sbjct: 286 KTVGIAVDTHVHRISNRLEWVS--TKTPEQTRIELEKLLDKKYWEDVNNLLVGYGQSVCK 343
Query: 685 PIKPNCGEC 711
P P C C
Sbjct: 344 PQNPQCQIC 352
Score = 69.7 bits (163), Expect = 7e-11
Identities = 33/93 (35%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
Frame = +2
Query: 263 MQRLRARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEK 442
M+++ +T+D + + EL ++I V F KV+YIK ++K YN IPD E
Sbjct: 205 MKKVVKEKITIDKAVEIPSSELKEIIKQVNFNGKKVEYIKNAAEVIKNTYNYVIPDQYED 264
Query: 443 LCKLNGVGPKMAHICMKVAWNKSLE-SVLTHMY 538
L K+ G+GPK+A++ ++ A+NK++ +V TH++
Sbjct: 265 LIKIKGIGPKVANLFLQCAYNKTVGIAVDTHVH 297
>UniRef50_Q7RCV0 Cluster: Drosophila melanogaster CG9272 gene
product; n=2; Plasmodium|Rep: Drosophila melanogaster
CG9272 gene product - Plasmodium yoelii yoelii
Length = 386
Score = 85.0 bits (201), Expect = 2e-15
Identities = 40/82 (48%), Positives = 56/82 (68%)
Frame = +2
Query: 263 MQRLRARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEK 442
M RL+ GL V+N+L S+EEL +LIY +GF+ K K I K ILKE+YN DIP + E+
Sbjct: 213 MGRLKKHGLNVENILKTSEEELKKLIYGIGFYNVKSKQIIKICQILKEKYNSDIPHNYEE 272
Query: 443 LCKLNGVGPKMAHICMKVAWNK 508
L KL G+G K++ + ++ A NK
Sbjct: 273 LIKLPGIGEKVSQLILQTALNK 294
Score = 78.2 bits (184), Expect = 2e-13
Identities = 37/76 (48%), Positives = 50/76 (65%)
Frame = +1
Query: 484 LYEGCLEQVTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVG 663
+ + L + GI VD HVHRI NR+ WV TK +T++ L+S++ E WSE+N LLVG
Sbjct: 287 ILQTALNKHEGIAVDIHVHRISNRLNWVY--TKNEADTQIKLKSFVDKELWSELNHLLVG 344
Query: 664 FGQTICQPIKPNCGEC 711
FGQ IC+ KP C +C
Sbjct: 345 FGQVICKGKKPLCEKC 360
>UniRef50_O28581 Cluster: Endonuclease III; n=1; Archaeoglobus
fulgidus|Rep: Endonuclease III - Archaeoglobus fulgidus
Length = 209
Score = 85.0 bits (201), Expect = 2e-15
Identities = 37/68 (54%), Positives = 45/68 (66%)
Frame = +1
Query: 508 VTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQP 687
+ I VDTHVHRI NR+GW + T PEET L+ P E W +VN +VGFGQT+C+P
Sbjct: 133 IPAIPVDTHVHRIANRLGWAR--TTKPEETEEVLKRLFPLEFWEKVNRAMVGFGQTVCKP 190
Query: 688 IKPNCGEC 711
KP C EC
Sbjct: 191 QKPLCDEC 198
Score = 60.1 bits (139), Expect = 5e-08
Identities = 29/77 (37%), Positives = 49/77 (63%)
Frame = +2
Query: 260 AMQRLRARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVE 439
A Q L A+ +++L +S+EE+ +LI VGF++ K K +K+ L E Y+ ++P S E
Sbjct: 52 AAQNLFAKVKKPEDLLKLSEEEIAELIKGVGFYRVKAKRLKELAKKLVEDYSSEVPLSFE 111
Query: 440 KLCKLNGVGPKMAHICM 490
+L KL G+G K A++ +
Sbjct: 112 ELVKLPGIGRKSANVVL 128
>UniRef50_A5K1Y6 Cluster: Endonuclease III homologue, putative; n=3;
Plasmodium|Rep: Endonuclease III homologue, putative -
Plasmodium vivax
Length = 417
Score = 83.4 bits (197), Expect = 5e-15
Identities = 39/80 (48%), Positives = 58/80 (72%)
Frame = +2
Query: 260 AMQRLRARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVE 439
AMQ+L+A GLT+ N+L +EEL +LI VGF+K K K I + + IL++QY+ DIP ++E
Sbjct: 247 AMQKLKAHGLTIHNMLKTPEEELQKLIQAVGFYKIKAKQIIQISQILRDQYDYDIPHTLE 306
Query: 440 KLCKLNGVGPKMAHICMKVA 499
L KL G+G K+AH+ ++ A
Sbjct: 307 GLLKLPGIGQKVAHLILQTA 326
Score = 74.1 bits (174), Expect = 3e-12
Identities = 34/76 (44%), Positives = 46/76 (60%)
Frame = +1
Query: 484 LYEGCLEQVTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVG 663
+ + L+ GI VD HVHRI NR+ WV TK T+ L+S++P WSE+N LVG
Sbjct: 322 ILQTALDTHEGIAVDIHVHRISNRLNWVC--TKNESATQSKLESFVPRTLWSELNKTLVG 379
Query: 664 FGQTICQPIKPNCGEC 711
FGQ +C+ P+C C
Sbjct: 380 FGQVVCKAKSPHCNMC 395
>UniRef50_Q6CKW0 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=2; Saccharomycetaceae|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 391
Score = 82.6 bits (195), Expect = 9e-15
Identities = 37/71 (52%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Frame = +1
Query: 505 QVTGIGVDTHVHRICNRIGWVK-KPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTIC 681
++ GIGVD HV R+ WV K KTPE TR L+SWLP W E+NP+LVGFGQ +C
Sbjct: 246 KIDGIGVDVHVDRLAKMWKWVDPKVCKTPEHTRKQLESWLPRSLWYEINPVLVGFGQVLC 305
Query: 682 QPIKPNCGECL 714
P C CL
Sbjct: 306 MPRSKRCELCL 316
Score = 72.5 bits (170), Expect = 9e-12
Identities = 37/121 (30%), Positives = 67/121 (55%), Gaps = 1/121 (0%)
Frame = +2
Query: 149 NHTHPNLYILKLLIGVQISMLSFSDAIKPNQGPS*LTAMQRLR-ARGLTVDNVLSMSDEE 325
++ P Y L+LL+ + +S + + M+ L G+T+ ++L + ++
Sbjct: 126 SNMQPKNYRLQLLVSLMLSSQTKDEVNAKAMHNIMEYCMEELGDPEGITLGSLLKIEEKI 185
Query: 326 LGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGPKMAHICMKVAWN 505
L + IY VGF K YIKK +L++Q++GD+P ++E L GVGPKM ++ ++ +W
Sbjct: 186 LDKEIYSVGFHTRKASYIKKAAVMLRDQFDGDVPTTIEGFMSLPGVGPKMGYLALQKSWA 245
Query: 506 K 508
K
Sbjct: 246 K 246
>UniRef50_A7TPL7 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 429
Score = 82.2 bits (194), Expect = 1e-14
Identities = 45/117 (38%), Positives = 67/117 (57%), Gaps = 1/117 (0%)
Frame = +2
Query: 161 PNLYILKLLIGVQISMLSFSDAIKPNQGPS*LTAMQRLRA-RGLTVDNVLSMSDEELGQL 337
P Y L++LIGV +S + + + L G+T+D +L + E L +L
Sbjct: 177 PINYRLQVLIGVMLSSQTKDEINAAAMHNITEYCINELEIPEGITIDALLEIDQEILDEL 236
Query: 338 IYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGPKMAHICMKVAWNK 508
I+ VGF K KY+K+T ILKE++N DIP ++E L L GVGPKM ++ ++ AW K
Sbjct: 237 IHSVGFHSRKAKYLKETALILKEKHNSDIPTNIEGLLALPGVGPKMGYLTLQKAWGK 293
Score = 78.6 bits (185), Expect = 1e-13
Identities = 36/71 (50%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Frame = +1
Query: 505 QVTGIGVDTHVHRICNRIGWV-KKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTIC 681
++ GI VD HVHR+ WV +K KTPE TR L+SWLP + W E+N +LVGFGQ IC
Sbjct: 293 KIDGICVDVHVHRLAKMWKWVDEKKCKTPEHTRKELESWLPRQLWYEINSVLVGFGQVIC 352
Query: 682 QPIKPNCGECL 714
C CL
Sbjct: 353 MSRGKRCDICL 363
>UniRef50_Q2LWZ1 Cluster: Endonuclease III N; n=1; Syntrophus
aciditrophicus SB|Rep: Endonuclease III N - Syntrophus
aciditrophicus (strain SB)
Length = 206
Score = 81.8 bits (193), Expect = 2e-14
Identities = 38/65 (58%), Positives = 44/65 (67%)
Frame = +1
Query: 517 IGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIKP 696
I VDTHVHRI NR+G V TKTPE+T ALQ+ LP WS N LLV FGQ +C+P+ P
Sbjct: 141 ICVDTHVHRISNRLGLVS--TKTPEQTESALQNVLPRRYWSRYNTLLVSFGQRVCRPLSP 198
Query: 697 NCGEC 711
C C
Sbjct: 199 LCSSC 203
Score = 75.8 bits (178), Expect = 1e-12
Identities = 39/106 (36%), Positives = 65/106 (61%), Gaps = 1/106 (0%)
Frame = +2
Query: 257 TAMQRLRARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSV 436
TA +RL + T + +L +S+EE+ Q IYPVGF++ K + I++ L E+++ +PDS+
Sbjct: 55 TATERLFSLASTPETMLELSEEEIRQAIYPVGFYRNKSRQIREICRDLIERFSSRVPDSL 114
Query: 437 EKLCKLNGVGPKMAHICMKVAWNKSLESVLTHMY-IGYAIGLDGSK 571
E L L GVG K A++ + + + K V TH++ I +GL +K
Sbjct: 115 EDLLSLKGVGQKTANLVLSLGFEKDAICVDTHVHRISNRLGLVSTK 160
>UniRef50_Q9WYK0 Cluster: Endonuclease III (EC 4.2.99.18)
(DNA-(apurinic or apyrimidinic site) lyase); n=5;
Thermotogaceae|Rep: Endonuclease III (EC 4.2.99.18)
(DNA-(apurinic or apyrimidinic site) lyase) - Thermotoga
maritima
Length = 213
Score = 81.0 bits (191), Expect = 3e-14
Identities = 36/65 (55%), Positives = 45/65 (69%)
Frame = +1
Query: 517 IGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIKP 696
+ VDTHVHRI NR+GWVK T+TPEET AL+ LP + W +N +V FG+ IC+P P
Sbjct: 128 LAVDTHVHRISNRLGWVK--TRTPEETEEALKKLLPEDLWGPINGSMVEFGRRICKPQNP 185
Query: 697 NCGEC 711
C EC
Sbjct: 186 LCEEC 190
Score = 57.6 bits (133), Expect = 3e-07
Identities = 31/83 (37%), Positives = 48/83 (57%)
Frame = +2
Query: 290 TVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGP 469
T + E+L LI G ++ K + I + + IL E+Y G +PDS+E+L KL GVG
Sbjct: 53 TPQELAKAKPEDLYDLIKESGMYRQKAERIVEISRILVEKYGGRVPDSLEELLKLPGVGR 112
Query: 470 KMAHICMKVAWNKSLESVLTHMY 538
K A+I + V + K +V TH++
Sbjct: 113 KTANIVLWVGFKKPALAVDTHVH 135
>UniRef50_Q74D69 Cluster: Endonuclease III, putative; n=2;
Bacteria|Rep: Endonuclease III, putative - Geobacter
sulfurreducens
Length = 209
Score = 80.6 bits (190), Expect = 4e-14
Identities = 35/67 (52%), Positives = 44/67 (65%)
Frame = +1
Query: 514 GIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIK 693
GI VDTHVHRICNR G+++ TKTPE+T +L+ LP W +N LV FGQ C P+
Sbjct: 131 GICVDTHVHRICNRWGYIR--TKTPEQTEFSLRRILPHRYWLVINDYLVTFGQNHCTPVS 188
Query: 694 PNCGECL 714
P C C+
Sbjct: 189 PRCSTCV 195
Score = 62.9 bits (146), Expect = 8e-09
Identities = 31/93 (33%), Positives = 56/93 (60%)
Frame = +2
Query: 260 AMQRLRARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVE 439
A +RL A T ++ +S +++ + IYPVGF+ TK + I + +L E+Y+G +PD ++
Sbjct: 47 ASERLFALADTPAAMVRLSKDDIEKAIYPVGFYHTKAEQILEICRVLLERYDGGVPDELD 106
Query: 440 KLCKLNGVGPKMAHICMKVAWNKSLESVLTHMY 538
+L GVG K A++ + + + K V TH++
Sbjct: 107 ELLAFKGVGRKTANLVITLGFGKPGICVDTHVH 139
>UniRef50_O66636 Cluster: Endonuclease III; n=1; Aquifex
aeolicus|Rep: Endonuclease III - Aquifex aeolicus
Length = 213
Score = 80.6 bits (190), Expect = 4e-14
Identities = 39/65 (60%), Positives = 42/65 (64%)
Frame = +1
Query: 517 IGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIKP 696
I VD HVHRI NR W TKTPEET L +P E WS++N LLV FGQTIC P KP
Sbjct: 141 IVVDVHVHRIVNR--WCLVKTKTPEETERKLMEIVPKELWSDINYLLVAFGQTICLPRKP 198
Query: 697 NCGEC 711
C EC
Sbjct: 199 KCEEC 203
Score = 74.5 bits (175), Expect = 2e-12
Identities = 32/81 (39%), Positives = 57/81 (70%)
Frame = +2
Query: 296 DNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGPKM 475
++++ +S++E+ +LIYPVGF++ K K +K+ IL E+Y G +PD++E+L KL GVG K+
Sbjct: 68 EDLIKLSEKEIEELIYPVGFYRVKAKQLKEIGKILIEKYGGKVPDTLEELLKLPGVGRKV 127
Query: 476 AHICMKVAWNKSLESVLTHMY 538
A++ + +NK V H++
Sbjct: 128 ANLVLSKGFNKPAIVVDVHVH 148
>UniRef50_Q74N20 Cluster: NEQ398; n=1; Nanoarchaeum equitans|Rep:
NEQ398 - Nanoarchaeum equitans
Length = 212
Score = 80.6 bits (190), Expect = 4e-14
Identities = 37/65 (56%), Positives = 43/65 (66%)
Frame = +1
Query: 517 IGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIKP 696
I VD HVHRI NR+GWVK TKTPEET L +P E W ++N +LV FG+ IC P KP
Sbjct: 137 IAVDVHVHRIANRLGWVK--TKTPEETEKQLYKIIPKEYWPKLNHMLVLFGRNICLPSKP 194
Query: 697 NCGEC 711
C C
Sbjct: 195 KCDIC 199
>UniRef50_Q8SRB8 Cluster: ENDONUCLEASE III; n=1; Encephalitozoon
cuniculi|Rep: ENDONUCLEASE III - Encephalitozoon
cuniculi
Length = 238
Score = 80.2 bits (189), Expect = 5e-14
Identities = 38/77 (49%), Positives = 49/77 (63%)
Frame = +1
Query: 481 YLYEGCLEQVTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLV 660
Y+ C + GI VDTHVHRI NRIG V+ T+ E TR L+ +P ++W +N +LV
Sbjct: 154 YMSHAC-NRTVGISVDTHVHRISNRIGLVR--TRDVESTRRELERVVPRKEWKTINNILV 210
Query: 661 GFGQTICQPIKPNCGEC 711
GFGQTIC +P C EC
Sbjct: 211 GFGQTICVAKRPRCEEC 227
Score = 48.8 bits (111), Expect = 1e-04
Identities = 33/94 (35%), Positives = 52/94 (55%), Gaps = 2/94 (2%)
Frame = +2
Query: 284 GLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGV 463
GLT++ V + + + + I VGF K +KK IL+E+ +P ++ L L G+
Sbjct: 90 GLTIERVANSDVKHINECIKKVGFHNRKAANLKKIAEILREK---GLPREMKDLISLPGI 146
Query: 464 GPKMAHICMKVAWNKSLE-SVLTHMY-IGYAIGL 559
G KMA + M A N+++ SV TH++ I IGL
Sbjct: 147 GNKMALLYMSHACNRTVGISVDTHVHRISNRIGL 180
>UniRef50_Q6L0L9 Cluster: Endonuclease III; n=5;
Thermoplasmatales|Rep: Endonuclease III - Picrophilus
torridus
Length = 215
Score = 79.8 bits (188), Expect = 6e-14
Identities = 37/66 (56%), Positives = 45/66 (68%)
Frame = +1
Query: 517 IGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIKP 696
I VDTHVHRI NRIG+V T+TPEET L+ +P E E NP+LV FG+ IC+P+ P
Sbjct: 131 IPVDTHVHRIVNRIGFVN--TRTPEETETELKKIIPLEYQIEFNPVLVEFGKNICKPVSP 188
Query: 697 NCGECL 714
C CL
Sbjct: 189 KCDMCL 194
Score = 54.8 bits (126), Expect = 2e-06
Identities = 26/73 (35%), Positives = 44/73 (60%)
Frame = +2
Query: 320 EELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGPKMAHICMKVA 499
E++ ++I VGF K K + + + YNG++PD+ E+L K+ GVG K A+I + +
Sbjct: 66 EDVKKIIKNVGFSNVKSKRVIDAAKYILKNYNGNVPDTYEELMKIKGVGTKTANIVLTQS 125
Query: 500 WNKSLESVLTHMY 538
+NK V TH++
Sbjct: 126 FNKPAIPVDTHVH 138
>UniRef50_Q8THA8 Cluster: DNA-(Apurinic or apyrimidinic site) lyase;
n=4; Methanosarcinaceae|Rep: DNA-(Apurinic or
apyrimidinic site) lyase - Methanosarcina acetivorans
Length = 216
Score = 78.6 bits (185), Expect = 1e-13
Identities = 36/66 (54%), Positives = 44/66 (66%)
Frame = +1
Query: 517 IGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIKP 696
+ VDTHVHRI NR+G V+ TKTPEET L L+ P + W +N LLV GQ IC+PI P
Sbjct: 143 LAVDTHVHRISNRLGLVE--TKTPEETELELKKIFPQKYWKHINLLLVKLGQNICRPISP 200
Query: 697 NCGECL 714
C C+
Sbjct: 201 KCEVCV 206
Score = 68.5 bits (160), Expect = 2e-10
Identities = 40/105 (38%), Positives = 63/105 (60%), Gaps = 1/105 (0%)
Frame = +2
Query: 260 AMQRLRARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVE 439
A ++L R T + ++ EE+ LI VGF++ K IK+ +GIL E+Y+G++PD +E
Sbjct: 58 AARKLFERFSTPEEMVGADVEEIEALIKDVGFYRVKSGRIKEISGILLEEYDGEVPDDME 117
Query: 440 KLCKLNGVGPKMAHICMKVAWNKSLESVLTHMY-IGYAIGLDGSK 571
L KL GVG K A+ + A+ K +V TH++ I +GL +K
Sbjct: 118 TLLKLPGVGRKTANCVLAHAFLKDALAVDTHVHRISNRLGLVETK 162
>UniRef50_UPI00015BCD73 Cluster: UPI00015BCD73 related cluster; n=1;
unknown|Rep: UPI00015BCD73 UniRef100 entry - unknown
Length = 225
Score = 78.2 bits (184), Expect = 2e-13
Identities = 36/68 (52%), Positives = 45/68 (66%)
Frame = +1
Query: 508 VTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQP 687
+ I VD HVHRI NR W TKTPE+T AL++ LP + W ++N LV FGQ IC+P
Sbjct: 138 IPAICVDVHVHRITNR--WCLVKTKTPEQTEEALKNILPKKYWIDINRYLVSFGQRICKP 195
Query: 688 IKPNCGEC 711
IKP+C C
Sbjct: 196 IKPSCNIC 203
Score = 65.3 bits (152), Expect = 1e-09
Identities = 29/75 (38%), Positives = 55/75 (73%)
Frame = +2
Query: 266 QRLRARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKL 445
+RL + +++++ ++ +EEL +LIY VGF+ TK K +K+ + IL E+Y+ IP+++E+L
Sbjct: 58 ERLFVKVKSIEDLYNIKEEELKELIYGVGFYNTKAKNLKELSKILVEKYSAKIPNTLEEL 117
Query: 446 CKLNGVGPKMAHICM 490
+L GVG K+A++ +
Sbjct: 118 LELPGVGLKVANLVL 132
>UniRef50_P31378 Cluster: DNA base excision repair N-glycosylase 1,
mitochondrial precursor; n=2; Saccharomyces
cerevisiae|Rep: DNA base excision repair N-glycosylase
1, mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 399
Score = 78.2 bits (184), Expect = 2e-13
Identities = 41/128 (32%), Positives = 75/128 (58%), Gaps = 1/128 (0%)
Frame = +2
Query: 161 PNLYILKLLIGVQISMLSFSDAIKPNQGPS*LTAMQRLRAR-GLTVDNVLSMSDEELGQL 337
P Y L++L+GV +S + + + L + G+T++ VL +++ +L +L
Sbjct: 139 PRDYRLQVLLGVMLSSQTKDEVTAMAMLNIMRYCIDELHSEEGMTLEAVLQINETKLDEL 198
Query: 338 IYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGPKMAHICMKVAWNKSLE 517
I+ VGF K KYI T IL++Q++ D+P ++ +L L GVGPKMA++ ++ AW K +E
Sbjct: 199 IHSVGFHTRKAKYILSTCKILQDQFSSDVPATINELLGLPGVGPKMAYLTLQKAWGK-IE 257
Query: 518 SVLTHMYI 541
+ +++
Sbjct: 258 GICVDVHV 265
Score = 64.1 bits (149), Expect = 3e-09
Identities = 33/71 (46%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Frame = +1
Query: 505 QVTGIGVDTHVHRICNRIGWVK-KPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTIC 681
++ GI VD HV R+ WV + KTP++TR LQ+WLP W+E+N LLVGFGQ I
Sbjct: 255 KIEGICVDVHVDRLTKLWKWVDAQKCKTPDQTRTQLQNWLPKGLWTEINGLLVGFGQIIT 314
Query: 682 QPIKPNCGECL 714
+ N G+ L
Sbjct: 315 K--SRNLGDML 323
>UniRef50_O26858 Cluster: Endonuclease III; n=2;
Methanobacteriaceae|Rep: Endonuclease III -
Methanobacterium thermoautotrophicum
Length = 233
Score = 77.4 bits (182), Expect = 3e-13
Identities = 38/65 (58%), Positives = 44/65 (67%)
Frame = +1
Query: 517 IGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIKP 696
I VDTHVHRI NRIG V T+TPEET AL +P E W E+N L+V FGQ IC+P+ P
Sbjct: 151 IPVDTHVHRISNRIGLVD--TRTPEETERALMKVIPREYWIELNDLMVQFGQDICRPLGP 208
Query: 697 NCGEC 711
EC
Sbjct: 209 RHEEC 213
Score = 58.0 bits (134), Expect = 2e-07
Identities = 30/91 (32%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Frame = +2
Query: 290 TVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGP 469
++++V EE+ LI GF+ K + +++ + I+ E+Y+G +PD + +L KL GVG
Sbjct: 76 SIEDVAYAPLEEIEALIRKAGFYHVKARRVREVSRIILEEYDGKVPDDINELLKLPGVGR 135
Query: 470 KMAHICMKVAWNKSLESVLTHMY-IGYAIGL 559
K A+ + A+ + V TH++ I IGL
Sbjct: 136 KTANCVLVYAFGRPAIPVDTHVHRISNRIGL 166
>UniRef50_Q08214 Cluster: DNA base excision repair N-glycosylase 2;
n=3; Saccharomycetales|Rep: DNA base excision repair
N-glycosylase 2 - Saccharomyces cerevisiae (Baker's
yeast)
Length = 380
Score = 74.9 bits (176), Expect = 2e-12
Identities = 35/70 (50%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = +1
Query: 508 VTGIGVDTHVHRICNRIGWVKK-PTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQ 684
+ GI VD HVHR+C WV KT E TR LQ WLP W E+N +LVGFGQ IC
Sbjct: 261 IAGICVDVHVHRLCKMWNWVDPIKCKTAEHTRKELQVWLPHSLWYEINTVLVGFGQLICM 320
Query: 685 PIKPNCGECL 714
C CL
Sbjct: 321 ARGKRCDLCL 330
Score = 64.1 bits (149), Expect = 3e-09
Identities = 27/75 (36%), Positives = 45/75 (60%)
Frame = +2
Query: 278 ARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLN 457
A G+T+D +L + + L LI V F+ K +IK+T +L + ++ DIP +E + L
Sbjct: 184 AEGITLDGLLKIDEPVLANLIRCVSFYTRKANFIKRTAQLLVDNFDSDIPYDIEGILSLP 243
Query: 458 GVGPKMAHICMKVAW 502
GVGPKM ++ ++ W
Sbjct: 244 GVGPKMGYLTLQKGW 258
>UniRef50_Q0AYC8 Cluster: Endonuclease III; n=1; Syntrophomonas
wolfei subsp. wolfei str. Goettingen|Rep: Endonuclease
III - Syntrophomonas wolfei subsp. wolfei (strain
Goettingen)
Length = 207
Score = 74.5 bits (175), Expect = 2e-12
Identities = 33/67 (49%), Positives = 45/67 (67%)
Frame = +1
Query: 514 GIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIK 693
G+GVDTHVHR+ NR+G V +K PE+T AL+ +P + WSE + LL+ G+ ICQ K
Sbjct: 132 GLGVDTHVHRVANRLGLVN--SKLPEQTEKALKEQIPEKCWSEAHHLLIFHGRRICQARK 189
Query: 694 PNCGECL 714
P C C+
Sbjct: 190 PQCNNCV 196
Score = 56.0 bits (129), Expect = 9e-07
Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Frame = +2
Query: 326 LGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGPKMAHICMKVAWN 505
L + I VG ++ K +++KK I+ EQY G++P ++L L GVG K A++ V +
Sbjct: 70 LEEKIRGVGLYRNKARHLKKMAQIIVEQYQGEVPSDFDELLSLPGVGRKSANVIRSVVFK 129
Query: 506 KSLESVLTHMY-IGYAIGLDGSK 571
K V TH++ + +GL SK
Sbjct: 130 KPGLGVDTHVHRVANRLGLVNSK 152
>UniRef50_Q7R032 Cluster: GLP_456_43375_44346; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_456_43375_44346 - Giardia lamblia
ATCC 50803
Length = 323
Score = 72.1 bits (169), Expect = 1e-11
Identities = 33/97 (34%), Positives = 56/97 (57%)
Frame = +2
Query: 218 SDAIKPNQGPS*LTAMQRLRARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGI 397
++A+ P + + +L A LT NV+ +ELG++I+PVGF + K +Y+K I
Sbjct: 104 AEAMLKKNFPIDIDNLMKLDAWRLTAKNVVDSGLDELGRIIHPVGFCRRKAEYMKNVAQI 163
Query: 398 LKEQYNGDIPDSVEKLCKLNGVGPKMAHICMKVAWNK 508
+ Y GDIP + + KL G GPKM H+ +++ + +
Sbjct: 164 CLDNYGGDIPKDLAGILKLPGFGPKMGHLLVQIVYGQ 200
Score = 69.7 bits (163), Expect = 7e-11
Identities = 34/77 (44%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Frame = +1
Query: 505 QVTGIGVDTHVHRICNRIGWVKK-------PTKTPEETRLALQSWLPFEQWSEVNPLLVG 663
QV GI VDTHV RI R+ WV+K P++ L LP ++W ++N LLVG
Sbjct: 200 QVEGIAVDTHVCRIAQRLRWVEKGMCEPNGKMLNPDDVAKQLVETLPKDKWRDINHLLVG 259
Query: 664 FGQTICQPIKPNCGECL 714
FGQT+C+ P C CL
Sbjct: 260 FGQTVCKASFPECNRCL 276
>UniRef50_Q8R957 Cluster: Predicted EndoIII-related endonuclease;
n=23; Bacteria|Rep: Predicted EndoIII-related
endonuclease - Thermoanaerobacter tengcongensis
Length = 213
Score = 70.9 bits (166), Expect = 3e-11
Identities = 39/104 (37%), Positives = 65/104 (62%), Gaps = 1/104 (0%)
Frame = +2
Query: 266 QRLRARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKL 445
+RL + T ++ L ++ EEL + I G ++ K K I +T ILKE++NG +PD++E+L
Sbjct: 54 ERLFKKYKTPEDFLKLTPEELQEEIRECGLYRNKSKSILETCRILKEKHNGKVPDTLEEL 113
Query: 446 CKLNGVGPKMAHICMKVAWNKSLESVLTHMY-IGYAIGLDGSKN 574
L GVG K A++ + A++K +V TH++ + IGL SK+
Sbjct: 114 MALPGVGRKTANVVLSNAFSKDAIAVDTHVFRVSNRIGLADSKD 157
Score = 47.2 bits (107), Expect = 4e-04
Identities = 25/65 (38%), Positives = 33/65 (50%)
Frame = +1
Query: 517 IGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIKP 696
I VDTHV R+ NRIG +K T L +P WS + LL+ G+ +C KP
Sbjct: 137 IAVDTHVFRVSNRIGLAD--SKDVLTTEKQLMEIIPKNLWSISHHLLIYHGRNLCTARKP 194
Query: 697 NCGEC 711
C +C
Sbjct: 195 KCDKC 199
>UniRef50_A0RYU8 Cluster: EndoIII-related endonuclease; n=3;
Archaea|Rep: EndoIII-related endonuclease - Cenarchaeum
symbiosum
Length = 277
Score = 70.9 bits (166), Expect = 3e-11
Identities = 33/65 (50%), Positives = 40/65 (61%)
Frame = +1
Query: 517 IGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIKP 696
I VD HVHRI NR+G V T+TPEET AL +P W VN + V +GQ IC+P+ P
Sbjct: 139 IPVDIHVHRISNRLGLVD--TRTPEETEAALTKKVPKRHWLHVNDIFVMYGQNICKPVSP 196
Query: 697 NCGEC 711
C C
Sbjct: 197 MCEVC 201
Score = 50.8 bits (116), Expect = 3e-05
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Frame = +2
Query: 263 MQRLRARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEK 442
++ L AR T + ++ +++ P+GF++ K + I + I+ +Y G +PD +E
Sbjct: 55 VKELFARYKTPRELARARHRDVERIVKPIGFYRVKSRRIMEVARIIDTKYGGRVPDDLET 114
Query: 443 LCKLNGVGPKMAHICMKVAWNKSLESVLTHMY-IGYAIGL 559
L L GVG K A+ + A+ K V H++ I +GL
Sbjct: 115 LVGLPGVGRKTANCVLVYAFEKPAIPVDIHVHRISNRLGL 154
>UniRef50_UPI0000499274 Cluster: endonuclease III; n=2; Entamoeba
histolytica HM-1:IMSS|Rep: endonuclease III - Entamoeba
histolytica HM-1:IMSS
Length = 241
Score = 70.1 bits (164), Expect = 5e-11
Identities = 30/70 (42%), Positives = 41/70 (58%)
Frame = +1
Query: 502 EQVTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTIC 681
+++ + +DTHV I R+GW TPE+ RL L+SWLP E+W N LV FGQ C
Sbjct: 161 DRLESLAIDTHVFVISQRLGWADG--STPEKVRLQLESWLPKEEWPLFNKSLVAFGQCCC 218
Query: 682 QPIKPNCGEC 711
+ P C +C
Sbjct: 219 RKTHPKCKQC 228
Score = 62.9 bits (146), Expect = 8e-09
Identities = 34/87 (39%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Frame = +2
Query: 287 LTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVG 466
L+VD + + S E L I VGF+ TK K +K I+KEQYN +P + ++L L GVG
Sbjct: 89 LSVDVINNTSLEVLINCIKGVGFYTTKAKRLKHCCVIMKEQYNNQVPQTKQQLLTLPGVG 148
Query: 467 PKMAHICMKVAWNKSLESVL--THMYI 541
PK+A + + + +++ LES+ TH+++
Sbjct: 149 PKIASLILSIGFDR-LESLAIDTHVFV 174
>UniRef50_A6Q118 Cluster: Endonuclease III; n=1; Nitratiruptor sp.
SB155-2|Rep: Endonuclease III - Nitratiruptor sp.
(strain SB155-2)
Length = 221
Score = 68.5 bits (160), Expect = 2e-10
Identities = 33/65 (50%), Positives = 42/65 (64%)
Frame = +1
Query: 517 IGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIKP 696
+ VDTHVHRICN G V T +P+ET L+ L E +N +LV FGQTIC+P +P
Sbjct: 143 VAVDTHVHRICNIWGLVN--TVSPQETDKRLEKMLKEEDKRGLNKILVSFGQTICKPQRP 200
Query: 697 NCGEC 711
+C EC
Sbjct: 201 HCEEC 205
Score = 58.8 bits (136), Expect = 1e-07
Identities = 27/80 (33%), Positives = 50/80 (62%)
Frame = +2
Query: 299 NVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGPKMA 478
++L + E + Q IYPVGF++ K + I+ + L E+++ +PD++E L + G+G K A
Sbjct: 71 DMLKVPRETIEQTIYPVGFYRQKARSIQAVSKELTERFDRAVPDTLEALVSIKGIGHKTA 130
Query: 479 HICMKVAWNKSLESVLTHMY 538
I ++ A+ K +V TH++
Sbjct: 131 KIVLENAFGKPYVAVDTHVH 150
>UniRef50_Q702G0 Cluster: Putative endonuclease III; n=1; uncultured
crenarchaeote|Rep: Putative endonuclease III -
uncultured crenarchaeote
Length = 219
Score = 67.3 bits (157), Expect = 4e-10
Identities = 33/65 (50%), Positives = 39/65 (60%)
Frame = +1
Query: 517 IGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIKP 696
I VD HVHRI NR+G V T+ EET L L + + E W EVN V +GQ +C PIKP
Sbjct: 144 IPVDVHVHRISNRLGIVN--TRKVEETELELCNIIDKEMWIEVNDTFVTYGQNVCLPIKP 201
Query: 697 NCGEC 711
C C
Sbjct: 202 KCNIC 206
Score = 50.0 bits (114), Expect = 6e-05
Identities = 23/82 (28%), Positives = 46/82 (56%)
Frame = +2
Query: 293 VDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGPK 472
+D + +++ I+ +GF+ K K IK+ +L E+++ +P ++E+L L GVG K
Sbjct: 70 IDGISKAELKDIRDSIHSIGFYNIKAKRIKQVVQLLIEKFDSKVPSNLEELLTLPGVGRK 129
Query: 473 MAHICMKVAWNKSLESVLTHMY 538
A+ + A+N+ V H++
Sbjct: 130 TANCVLVYAFNQPAIPVDVHVH 151
>UniRef50_Q3AD17 Cluster: Endonuclease III; n=1; Carboxydothermus
hydrogenoformans Z-2901|Rep: Endonuclease III -
Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 210
Score = 66.9 bits (156), Expect = 5e-10
Identities = 33/92 (35%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Frame = +2
Query: 299 NVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGPKMA 478
++L M +EEL + I +G ++ K + + K IL +Y+G +PDS +L KL GVGPK A
Sbjct: 63 DLLDMGEEELSRQIRSLGLYRNKARNLIKIAEILDREYHGQVPDSFAELLKLPGVGPKTA 122
Query: 479 HICMKVAWNKSLESVLTHMY-IGYAIGLDGSK 571
+ + V +NK V TH++ + +GL ++
Sbjct: 123 EVIVGVGFNKPSFPVDTHVFRVARRLGLSKAR 154
Score = 51.2 bits (117), Expect = 2e-05
Identities = 24/63 (38%), Positives = 35/63 (55%)
Frame = +1
Query: 523 VDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIKPNC 702
VDTHV R+ R+G K +TPE L+ P W +++ L+ FG+ IC+ KP+C
Sbjct: 137 VDTHVFRVARRLGLSK--ARTPEGVSFDLKKIFPPNSWIDLHHRLIFFGRRICKAQKPSC 194
Query: 703 GEC 711
C
Sbjct: 195 NIC 197
>UniRef50_Q1CYH4 Cluster: Base excision DNA repair protein, HhH-GPD
family; n=2; Cystobacterineae|Rep: Base excision DNA
repair protein, HhH-GPD family - Myxococcus xanthus
(strain DK 1622)
Length = 240
Score = 66.1 bits (154), Expect = 8e-10
Identities = 31/65 (47%), Positives = 41/65 (63%)
Frame = +1
Query: 517 IGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIKP 696
I VD HVHR+ NR G+V+ +TPE T AL++ LP W E+N LLV FG+ +C +P
Sbjct: 163 ISVDIHVHRVTNRWGYVQ--ARTPEATMEALEAVLPRAWWVELNRLLVPFGKHVCTGTRP 220
Query: 697 NCGEC 711
C C
Sbjct: 221 KCSTC 225
Score = 48.8 bits (111), Expect = 1e-04
Identities = 26/89 (29%), Positives = 43/89 (48%)
Frame = +2
Query: 272 LRARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCK 451
L R T + + MS E++ LI PV F + K + ++++ G +P + L
Sbjct: 82 LLQRASTPEALARMSPEDIDALIQPVTFHEAKAWQLHAIATRTRDEFGGALPCDAQVLQS 141
Query: 452 LNGVGPKMAHICMKVAWNKSLESVLTHMY 538
GVGPK AH+ + +A SV H++
Sbjct: 142 FKGVGPKCAHLALGIACGHEAISVDIHVH 170
>UniRef50_A0DCH8 Cluster: Chromosome undetermined scaffold_45, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_45,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 278
Score = 66.1 bits (154), Expect = 8e-10
Identities = 31/70 (44%), Positives = 45/70 (64%)
Frame = +1
Query: 502 EQVTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTIC 681
++V GI +D ++ RICNR+ K+ K+P + R L+S ++W E+N LVGFGQ IC
Sbjct: 195 QRVEGIPIDVNMIRICNRVPIFKE--KSPTKLRKFLESQFEHKEWGEINETLVGFGQQIC 252
Query: 682 QPIKPNCGEC 711
P KP C +C
Sbjct: 253 LP-KPKCDQC 261
>UniRef50_Q8U1H8 Cluster: Glycosylase putative; mutY-nth family;
n=4; Thermococcaceae|Rep: Glycosylase putative; mutY-nth
family - Pyrococcus furiosus
Length = 225
Score = 62.9 bits (146), Expect = 8e-09
Identities = 29/65 (44%), Positives = 41/65 (63%)
Frame = +1
Query: 517 IGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIKP 696
I VDTHV+RI R+G + TPE+ L++ +P E+W VN +V G++IC+PIKP
Sbjct: 151 IPVDTHVYRISRRLG-LAPINSTPEKVEEILKTLIPVEEWIYVNHAMVDHGKSICRPIKP 209
Query: 697 NCGEC 711
C C
Sbjct: 210 KCELC 214
Score = 57.6 bits (133), Expect = 3e-07
Identities = 32/101 (31%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Frame = +2
Query: 266 QRLRARGLTVDNVLSMSDEELGQLI--YPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVE 439
+ L R +++ + + S E + + + VG WK K K+I + + I+ +Y G +P+++E
Sbjct: 66 EELFKRYKSIEEIANESVENMQEFLRKQKVGLWKNKGKWIVEASRIILYKYGGKVPNTLE 125
Query: 440 KLCKLNGVGPKMAHICMKVAWNKSLESVLTHMY-IGYAIGL 559
+L KL G+G K A+I + + K V TH+Y I +GL
Sbjct: 126 ELMKLPGIGRKCANIVLAYGFGKPAIPVDTHVYRISRRLGL 166
>UniRef50_Q00UQ6 Cluster: Endonuclease III; n=2; Ostreococcus|Rep:
Endonuclease III - Ostreococcus tauri
Length = 296
Score = 62.5 bits (145), Expect = 1e-08
Identities = 28/75 (37%), Positives = 39/75 (52%)
Frame = +1
Query: 487 YEGCLEQVTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGF 666
Y+ Q G+ VDTHV R+ R+GWV K PE R+ LQ+ + + W E+ L+
Sbjct: 205 YDESSAQYAGVVVDTHVQRVSRRLGWVGK-CDDPERVRMKLQARVHRDDWEELTLGLIAL 263
Query: 667 GQTICQPIKPNCGEC 711
GQ +C P C C
Sbjct: 264 GQNVCHSRNPACDRC 278
Score = 51.6 bits (118), Expect = 2e-05
Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Frame = +2
Query: 254 LTAMQRLR----ARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGD 421
L A QRLR + +T++ V M L + + W+ K KYIK+ + + ++
Sbjct: 119 LRAFQRLRDDHMSGDVTIERVRKMDRATLESALKTLNLWRAKAKYIKECSEAIHFKFRDT 178
Query: 422 IPDSVEKLCKLNGVGPKMAHICMKVAWNKS 511
+P +V L L GVG K+AH+ V++++S
Sbjct: 179 VPRTVGALKTLPGVGDKLAHLVASVSYDES 208
>UniRef50_Q8YEU5 Cluster: ENDONUCLEASE III; n=21;
Alphaproteobacteria|Rep: ENDONUCLEASE III - Brucella
melitensis
Length = 248
Score = 62.1 bits (144), Expect = 1e-08
Identities = 34/105 (32%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Frame = +2
Query: 260 AMQRLRARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVE 439
A + L A T +L++ +E++G+ I +G W+ K K + + L Y G++P +
Sbjct: 77 ATRALFAVADTPQKMLALGEEKVGEYIRTIGLWRNKAKNVILLSEALIRDYGGEVPGDRD 136
Query: 440 KLCKLNGVGPKMAHICMKVAWNKSLESVLTH-MYIGYAIGLDGSK 571
+L KL GVG K A++ + +A+ + +V TH + IG IGL K
Sbjct: 137 ELVKLPGVGRKTANVVLNMAFGQPTMAVDTHILRIGNRIGLAPGK 181
Score = 47.6 bits (108), Expect = 3e-04
Identities = 25/66 (37%), Positives = 35/66 (53%)
Frame = +1
Query: 517 IGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIKP 696
+ VDTH+ RI NRIG P KTPE L +P E + L+ G+ +C+ KP
Sbjct: 162 MAVDTHILRIGNRIGLA--PGKTPEAVEAILVRVIPREYMLHAHHWLILHGRYVCKARKP 219
Query: 697 NCGECL 714
C +C+
Sbjct: 220 ECEKCV 225
>UniRef50_Q7NJL1 Cluster: Endonuclease III; n=1; Gloeobacter
violaceus|Rep: Endonuclease III - Gloeobacter violaceus
Length = 220
Score = 61.7 bits (143), Expect = 2e-08
Identities = 30/66 (45%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Frame = +1
Query: 517 IGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTIC-QPIK 693
I VDTH+H+I NR+GWV TKTPE+T AL+ +P + W+ N L + G+ IC
Sbjct: 140 ICVDTHMHKIANRLGWV--TTKTPEQTEKALEVVMPRDLWAGSNRLFLQHGRAICLSGAP 197
Query: 694 PNCGEC 711
P C C
Sbjct: 198 PLCSRC 203
Score = 45.2 bits (102), Expect = 0.002
Identities = 27/91 (29%), Positives = 48/91 (52%)
Frame = +2
Query: 266 QRLRARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKL 445
QR+ AR + ++ + ++EL L+ + + K + IL E+Y G +PD ++ L
Sbjct: 57 QRVFARYPDMASLAAADEKELLVLLAGSEYREAKGPRLIAMATILLEKYGGRVPDDIDAL 116
Query: 446 CKLNGVGPKMAHICMKVAWNKSLESVLTHMY 538
L G+G K A+ + A+N+ V THM+
Sbjct: 117 LALPGIGRKTANCVLIYAFNREAICVDTHMH 147
>UniRef50_A2DVT6 Cluster: Endonuclease III, putative; n=1;
Trichomonas vaginalis G3|Rep: Endonuclease III, putative
- Trichomonas vaginalis G3
Length = 82
Score = 61.3 bits (142), Expect = 2e-08
Identities = 28/68 (41%), Positives = 38/68 (55%)
Frame = +1
Query: 511 TGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPI 690
TGI VDTHVHR+ NR+ +VK T P T L + + W + + +GQ ICQ
Sbjct: 9 TGITVDTHVHRLANRLHFVK--TNNPNATSQKLSEIIDKDLWKDASQAFYYYGQQICQAK 66
Query: 691 KPNCGECL 714
KP C +C+
Sbjct: 67 KPQCDDCI 74
>UniRef50_A3EW96 Cluster: Putative EndoIII-related endonuclease;
n=1; Leptospirillum sp. Group II UBA|Rep: Putative
EndoIII-related endonuclease - Leptospirillum sp. Group
II UBA
Length = 210
Score = 60.5 bits (140), Expect = 4e-08
Identities = 32/95 (33%), Positives = 53/95 (55%)
Frame = +2
Query: 254 LTAMQRLRARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDS 433
+ A QRL + + ++ M ++ LI+PVGF++TK K IK + ++ G IPD+
Sbjct: 46 IPASQRLFEKAPDLPSLSQMKISDIESLIFPVGFYRTKAKTIKTIAERVLTEFGGKIPDT 105
Query: 434 VEKLCKLNGVGPKMAHICMKVAWNKSLESVLTHMY 538
+E L L GVG K A++ + V + K V H++
Sbjct: 106 LEGLLSLPGVGLKTANLVLTVGFEKEGFCVDIHVH 140
Score = 58.0 bits (134), Expect = 2e-07
Identities = 29/66 (43%), Positives = 38/66 (57%)
Frame = +1
Query: 514 GIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIK 693
G VD HVHRI NR G ++ T +P+ET ++ LP + N LLV FGQ C+P+
Sbjct: 132 GFCVDIHVHRILNRWGVIQ--THSPDETYHIVEPVLPRKWKRRANALLVAFGQHFCRPVS 189
Query: 694 PNCGEC 711
P C C
Sbjct: 190 PFCSVC 195
>UniRef50_Q11CD9 Cluster: Endonuclease III; n=3; Rhizobiales|Rep:
Endonuclease III - Mesorhizobium sp. (strain BNC1)
Length = 268
Score = 59.7 bits (138), Expect = 7e-08
Identities = 27/83 (32%), Positives = 47/83 (56%)
Frame = +2
Query: 290 TVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGP 469
T + +L++ +E+LG+ I +G W+ K K + L + G +P+ E L KL GVG
Sbjct: 93 TPEKMLALGEEKLGEYIRTIGLWRNKAKNVIALCEALIRDHGGQVPEDREALTKLPGVGR 152
Query: 470 KMAHICMKVAWNKSLESVLTHMY 538
K A++ + VA+ +V TH++
Sbjct: 153 KTANVVLNVAFGHPTMAVDTHIF 175
Score = 48.4 bits (110), Expect = 2e-04
Identities = 25/66 (37%), Positives = 36/66 (54%)
Frame = +1
Query: 517 IGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIKP 696
+ VDTH+ RI NRI + P KTPEE AL +P + L+ G+ +C+ KP
Sbjct: 168 MAVDTHIFRISNRI--LLAPGKTPEEVEQALLKVIPQHYLLHAHHWLILHGRYVCKARKP 225
Query: 697 NCGECL 714
+C C+
Sbjct: 226 DCPACV 231
>UniRef50_A4E9V4 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 221
Score = 59.3 bits (137), Expect = 9e-08
Identities = 31/69 (44%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = +1
Query: 508 VTGIGVDTHVHRICNRIGWVKKP-TKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQ 684
V GI VDTHV+RI +R+ K K P +T L LP E W VN + FG+ IC
Sbjct: 140 VEGIAVDTHVNRIAHRLMLSPKTHAKEPLKTEQDLLKILPHEYWESVNHQWITFGREICD 199
Query: 685 PIKPNCGEC 711
KP C EC
Sbjct: 200 ARKPKCDEC 208
Score = 47.2 bits (107), Expect = 4e-04
Identities = 23/78 (29%), Positives = 44/78 (56%)
Frame = +2
Query: 269 RLRARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLC 448
+L A+ T + + S ++ I +GF+K+K K+ + ++ Y G++P +++L
Sbjct: 60 KLFAQWPTPEAMAGASVADVADTIKSLGFYKSKAKHAVEAAQMIVADYGGEVPADMKELV 119
Query: 449 KLNGVGPKMAHICMKVAW 502
KL GVG K A+I + V +
Sbjct: 120 KLPGVGRKTANIVLNVGY 137
>UniRef50_Q2S025 Cluster: Endonuclease III; n=2;
Sphingobacteriales|Rep: Endonuclease III - Salinibacter
ruber (strain DSM 13855)
Length = 324
Score = 58.4 bits (135), Expect = 2e-07
Identities = 25/63 (39%), Positives = 37/63 (58%)
Frame = +1
Query: 523 VDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIKPNC 702
VDTHV R+ NRIG VK+ TP++ L+ +P +W E + LL+ G+ C P+C
Sbjct: 180 VDTHVFRVANRIGLVKEDATTPKKVEQQLKRVIPKAEWGEAHHLLILHGRYTCTARSPDC 239
Query: 703 GEC 711
+C
Sbjct: 240 HDC 242
Score = 41.1 bits (92), Expect = 0.027
Identities = 22/90 (24%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Frame = +2
Query: 293 VDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGPK 472
V+ + + +++ I + F K Y+ + + + ++G +P++++ L L GVG K
Sbjct: 104 VEALAEATPDDIHPYIQSITFPNNKAGYLARMARQVVDNFDGKVPETIDDLETLTGVGRK 163
Query: 473 MAHICMKVAWNKSLESVLTHMY-IGYAIGL 559
A + +VA + V TH++ + IGL
Sbjct: 164 TARVVAQVAHDADALPVDTHVFRVANRIGL 193
>UniRef50_Q64R69 Cluster: Endonuclease III; n=12; Bacteroidetes|Rep:
Endonuclease III - Bacteroides fragilis
Length = 225
Score = 56.8 bits (131), Expect = 5e-07
Identities = 29/94 (30%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Frame = +2
Query: 290 TVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGP 469
T + + + + E + + I V + K K++ +L +N ++PD++E+L KL GVG
Sbjct: 61 TPEALAATTPEVIFEYIRSVSYPNNKSKHLVGMARMLVNDFNSEVPDTLEELIKLPGVGR 120
Query: 470 KMAHICMKVAWNKSLESVLTHMY-IGYAIGLDGS 568
K A++ V +NK+ +V TH++ + + IGL G+
Sbjct: 121 KTANVIQSVVFNKAAMAVDTHVFRVSHRIGLVGN 154
Score = 41.5 bits (93), Expect = 0.020
Identities = 22/65 (33%), Positives = 30/65 (46%)
Frame = +1
Query: 517 IGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIKP 696
+ VDTHV R+ +RIG V TP L +P E + L+ G+ +CQ P
Sbjct: 136 MAVDTHVFRVSHRIGLVGNSCTTPFSVEKELMKNIPDELIPIAHHWLILHGRYVCQARTP 195
Query: 697 NCGEC 711
C C
Sbjct: 196 KCETC 200
>UniRef50_Q5KXY2 Cluster: Endonuclease III (DNA-(Apurinic or
apyrimidinic site) lyase); n=36; Bacilli|Rep:
Endonuclease III (DNA-(Apurinic or apyrimidinic site)
lyase) - Geobacillus kaustophilus
Length = 223
Score = 56.8 bits (131), Expect = 5e-07
Identities = 30/90 (33%), Positives = 54/90 (60%)
Frame = +2
Query: 266 QRLRARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKL 445
+RL + T + +++ EEL Q I +G ++ K + I+K +L ++YNG++P ++L
Sbjct: 53 KRLFEKYRTPHDYIAVPLEELEQDIRSIGLYRNKARNIQKLCAMLIDKYNGEVPRDRDEL 112
Query: 446 CKLNGVGPKMAHICMKVAWNKSLESVLTHM 535
KL GVG K A++ + VA+ +V TH+
Sbjct: 113 MKLPGVGRKTANVVVSVAFGVPAIAVDTHV 142
Score = 45.6 bits (103), Expect = 0.001
Identities = 22/68 (32%), Positives = 34/68 (50%)
Frame = +1
Query: 508 VTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQP 687
V I VDTHV R+ R+G+ + E + L +P E+WS + ++ FG+ C+
Sbjct: 133 VPAIAVDTHVERVSKRLGFCRWDDSVLEVEK-TLMKIIPKEEWSITHHRMIFFGRYHCKA 191
Query: 688 IKPNCGEC 711
P C C
Sbjct: 192 QSPQCPSC 199
>UniRef50_Q6MQ89 Cluster: Endo III-related endonuclease; n=2;
Bacteria|Rep: Endo III-related endonuclease -
Bdellovibrio bacteriovorus
Length = 221
Score = 56.4 bits (130), Expect = 7e-07
Identities = 26/67 (38%), Positives = 37/67 (55%)
Frame = +1
Query: 511 TGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPI 690
+GI VDTHV R+ NR+GWVK E +L+ +P E W + L+ G+ +C+
Sbjct: 146 SGIVVDTHVTRLANRLGWVKTDNAVMIERQLS--KLVPVEDWIMLPHWLISHGRAVCKAR 203
Query: 691 KPNCGEC 711
KP C C
Sbjct: 204 KPACSHC 210
Score = 53.2 bits (122), Expect = 6e-06
Identities = 25/62 (40%), Positives = 39/62 (62%)
Frame = +2
Query: 320 EELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGPKMAHICMKVA 499
E L +LI GF+K K K +K L E+++G++P S+E L +L GVG K A++ + A
Sbjct: 82 ESLEELIRSTGFYKNKAKNLKACATTLVEKHHGEVPQSLEALVELGGVGRKTANVVLGNA 141
Query: 500 WN 505
+N
Sbjct: 142 FN 143
>UniRef50_Q1FPF6 Cluster: HhH-GPD; n=1; Clostridium phytofermentans
ISDg|Rep: HhH-GPD - Clostridium phytofermentans ISDg
Length = 212
Score = 55.6 bits (128), Expect = 1e-06
Identities = 26/69 (37%), Positives = 37/69 (53%)
Frame = +1
Query: 508 VTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQP 687
+ G+ VDTHV RI R+GW + K P + L LP E W+ +N L+ G+++C
Sbjct: 132 IPGVTVDTHVLRIAKRLGWAEG--KNPVQVEQELMKILPKENWNRINFQLIYHGRSVCTA 189
Query: 688 IKPNCGECL 714
K C CL
Sbjct: 190 RKCYCERCL 198
Score = 47.2 bits (107), Expect = 4e-04
Identities = 27/86 (31%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Frame = +2
Query: 320 EELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGPKMAHICMKVA 499
EE+ I +G +K+K K +K+ + ++Y G +P ++ +L KL+GVG K A + + A
Sbjct: 70 EEIEDQIRSIGLYKSKAKNMKQCCKQVIDEYGGKVPTTINELVKLSGVGRKSATLFLADA 129
Query: 500 WNKSLESVLTH-MYIGYAIGLDGSKN 574
++ +V TH + I +G KN
Sbjct: 130 YDIPGVTVDTHVLRIAKRLGWAEGKN 155
>UniRef50_Q2RH98 Cluster: Endonuclease III; n=1; Moorella
thermoacetica ATCC 39073|Rep: Endonuclease III -
Moorella thermoacetica (strain ATCC 39073)
Length = 233
Score = 55.2 bits (127), Expect = 2e-06
Identities = 28/88 (31%), Positives = 53/88 (60%), Gaps = 2/88 (2%)
Frame = +2
Query: 302 VLSMSD-EELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGPKMA 478
VL+ +D EE+ I +G ++TK ++ L +Y G +PD +E L +L+GVG K+A
Sbjct: 85 VLAAADPEEVAACIKSLGLYRTKAAHLVAACRTLVREYGGRVPDKLEDLLRLHGVGRKVA 144
Query: 479 HICMKVAWNKSLESVLTHMY-IGYAIGL 559
++ + A+ + + +V TH++ + +GL
Sbjct: 145 NVVLSNAFGRDVIAVDTHVFRVANRLGL 172
Score = 44.8 bits (101), Expect = 0.002
Identities = 23/65 (35%), Positives = 33/65 (50%)
Frame = +1
Query: 517 IGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIKP 696
I VDTHV R+ NR+G + ET L + LP E + LL+ G+ +C+ P
Sbjct: 157 IAVDTHVFRVANRLGLAR--AGDVRETERQLMAALPPGSRGEAHHLLIYHGREVCRARNP 214
Query: 697 NCGEC 711
C +C
Sbjct: 215 RCRDC 219
>UniRef50_Q08S09 Cluster: Endonuclease III; n=2;
Cystobacterineae|Rep: Endonuclease III - Stigmatella
aurantiaca DW4/3-1
Length = 213
Score = 55.2 bits (127), Expect = 2e-06
Identities = 26/67 (38%), Positives = 37/67 (55%)
Frame = +1
Query: 511 TGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPI 690
+G+ VDTHV R+ R+G +K K PE+ L +P +QW+ P +V G+ C
Sbjct: 135 SGVIVDTHVARVSQRLGLTQK--KKPEDIEQELMRLVPQDQWTFFGPAMVLHGRYTCTAR 192
Query: 691 KPNCGEC 711
KP CG C
Sbjct: 193 KPQCGAC 199
Score = 42.3 bits (95), Expect = 0.011
Identities = 18/53 (33%), Positives = 32/53 (60%)
Frame = +2
Query: 344 PVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGPKMAHICMKVAW 502
P GF+K K K ++ + L ++ G++P S+E+L L GV K A++ + A+
Sbjct: 79 PTGFYKQKAKAVQTMSRELLARFGGEVPQSLEQLVTLPGVARKTANVVLNTAF 131
>UniRef50_P39788 Cluster: Probable endonuclease III (EC 4.2.99.18)
(DNA-(apurinic or apyrimidinic site) lyase); n=33;
Firmicutes|Rep: Probable endonuclease III (EC 4.2.99.18)
(DNA-(apurinic or apyrimidinic site) lyase) - Bacillus
subtilis
Length = 219
Score = 55.2 bits (127), Expect = 2e-06
Identities = 28/80 (35%), Positives = 49/80 (61%)
Frame = +2
Query: 296 DNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGPKM 475
++ L++ EEL Q I +G ++ K K I+K + ++ E Y G++P ++L KL GVG K
Sbjct: 63 EDYLAVPLEELQQDIKSIGLYRNKAKNIQKLSKMIIEDYGGEVPRDRDELVKLPGVGRKT 122
Query: 476 AHICMKVAWNKSLESVLTHM 535
A++ + VA+ +V TH+
Sbjct: 123 ANVVVSVAFGVPAIAVDTHV 142
Score = 46.8 bits (106), Expect = 5e-04
Identities = 23/68 (33%), Positives = 34/68 (50%)
Frame = +1
Query: 508 VTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQP 687
V I VDTHV R+ R+G + E + ++ +P E WS + L+ FG+ C+
Sbjct: 133 VPAIAVDTHVERVSKRLGICRWKDSVLEVEKTLMRK-VPKEDWSVTHHRLIFFGRYHCKA 191
Query: 688 IKPNCGEC 711
P C EC
Sbjct: 192 QSPRCAEC 199
>UniRef50_UPI00015BD5DD Cluster: UPI00015BD5DD related cluster; n=1;
unknown|Rep: UPI00015BD5DD UniRef100 entry - unknown
Length = 211
Score = 54.8 bits (126), Expect = 2e-06
Identities = 30/86 (34%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Frame = +2
Query: 320 EELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGPKMAHICMKVA 499
EE+ + I + F+ K IK+ IL ++YN +PD ++L KL GVG K A++ + A
Sbjct: 71 EEIKEAIKSISFYNKKAIAIKEIATILVDKYNSKVPDEEDELVKLPGVGKKTANMVLANA 130
Query: 500 WNKSLESVLTHMY-IGYAIGLDGSKN 574
+ K +V H++ I +GLD +K+
Sbjct: 131 FKKPAIAVDRHVHRIVQRLGLDKNKD 156
Score = 47.2 bits (107), Expect = 4e-04
Identities = 25/66 (37%), Positives = 35/66 (53%)
Frame = +1
Query: 517 IGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIKP 696
I VD HVHRI R+G K K P++T L+S + E W+ LL+ + +C P
Sbjct: 136 IAVDRHVHRIVQRLGLDKN--KDPDKTTEHLKSIVDKELWTTFYLLLLRHAKEVCTAKNP 193
Query: 697 NCGECL 714
C EC+
Sbjct: 194 KCQECV 199
>UniRef50_Q8KBS3 Cluster: Endonuclease III; n=10; Chlorobiaceae|Rep:
Endonuclease III - Chlorobium tepidum
Length = 213
Score = 54.8 bits (126), Expect = 2e-06
Identities = 28/68 (41%), Positives = 38/68 (55%)
Frame = +1
Query: 508 VTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQP 687
+ + VDTHVHR+ NRIG K T PEET AL +P E+ + + L+ G+ C+
Sbjct: 135 IPAMPVDTHVHRVSNRIGLCK--TSKPEETEEALVKVIPEEKLIDFHHYLLLHGRYTCKA 192
Query: 688 IKPNCGEC 711
KP C C
Sbjct: 193 KKPECANC 200
Score = 44.8 bits (101), Expect = 0.002
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +2
Query: 311 MSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGPKMAHICM 490
M E++ +I P+ ++ K K I + L +++ G++P S E L L GVG K A++ +
Sbjct: 70 MDVEDIRTIIRPINYYNNKAKNILAMSRRLVDEFGGEVPASREALESLPGVGRKTANVVL 129
Query: 491 KVAWNKSLESVLTHMY-IGYAIGL 559
A+ V TH++ + IGL
Sbjct: 130 GNAFGIPAMPVDTHVHRVSNRIGL 153
>UniRef50_Q97QE0 Cluster: Endonuclease III; n=25; Streptococcus|Rep:
Endonuclease III - Streptococcus pneumoniae
Length = 209
Score = 54.4 bits (125), Expect = 3e-06
Identities = 26/67 (38%), Positives = 34/67 (50%)
Frame = +1
Query: 508 VTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQP 687
+ VDTHV RIC VKK + TP E + LP EQW + ++ FG+ IC P
Sbjct: 134 IPAFAVDTHVERICKHHDIVKK-SATPLEVEKRVMDILPPEQWLAAHQAMIYFGRAICHP 192
Query: 688 IKPNCGE 708
P C +
Sbjct: 193 KNPECDQ 199
Score = 48.0 bits (109), Expect = 2e-04
Identities = 23/74 (31%), Positives = 42/74 (56%)
Frame = +2
Query: 314 SDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGPKMAHICMK 493
++ E+ I +G ++ K K++KK L + ++G +P + E+L L GVG K A++ M
Sbjct: 70 TESEIASHISRLGLYRNKAKFLKKCAQQLLDDFDGQVPQTREELESLAGVGRKTANVVMS 129
Query: 494 VAWNKSLESVLTHM 535
V + +V TH+
Sbjct: 130 VGFGIPAFAVDTHV 143
>UniRef50_A7DG78 Cluster: HhH-GPD family protein; n=2;
Methylobacterium extorquens PA1|Rep: HhH-GPD family
protein - Methylobacterium extorquens PA1
Length = 238
Score = 54.4 bits (125), Expect = 3e-06
Identities = 27/82 (32%), Positives = 46/82 (56%)
Frame = +2
Query: 290 TVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGP 469
T + + + D+EL ++I PV + K K +K+ + E Y+G+IPD+ + L KL GVG
Sbjct: 86 TFEELRDLPDDELRRIIKPVAHYNRKTKNLKEMARQIIEDYDGNIPDNRDDLIKLQGVGR 145
Query: 470 KMAHICMKVAWNKSLESVLTHM 535
K I M +++ +V H+
Sbjct: 146 KCVDILMNFTFSQDSIAVDRHV 167
Score = 35.9 bits (79), Expect = 1.00
Identities = 19/65 (29%), Positives = 30/65 (46%)
Frame = +1
Query: 517 IGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIKP 696
I VD HV R+ NR+G V+ T + ++ + + P + L+ G IC P
Sbjct: 161 IAVDRHVLRVMNRLGVVE--TTSAKQAADLINAQTPARHKRHAHEWLIQHGMKICVARTP 218
Query: 697 NCGEC 711
C +C
Sbjct: 219 KCADC 223
>UniRef50_A6C1X5 Cluster: Endonuclease III; n=1; Planctomyces maris
DSM 8797|Rep: Endonuclease III - Planctomyces maris DSM
8797
Length = 240
Score = 54.0 bits (124), Expect = 4e-06
Identities = 32/97 (32%), Positives = 55/97 (56%), Gaps = 2/97 (2%)
Frame = +2
Query: 290 TVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGP 469
T + + + ++ +++YP+GF++ K I+K + EQY G+IP ++++L L GVG
Sbjct: 86 TAEKLSTSKQADVEKIVYPLGFFRAKATNIRKMALAVTEQYAGEIPRTLKELVALPGVGR 145
Query: 470 KMAHICMKVAWN-KSLESVLTHM-YIGYAIGLDGSKN 574
K A++ + A+ S V TH+ I GL SKN
Sbjct: 146 KTANVVLGTAFGIPSGVVVDTHVKRICNIFGLTTSKN 182
Score = 48.8 bits (111), Expect = 1e-04
Identities = 25/67 (37%), Positives = 34/67 (50%)
Frame = +1
Query: 511 TGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPI 690
+G+ VDTHV RICN G +K PE L LP ++W + ++ G+ C
Sbjct: 160 SGVVVDTHVKRICNIFGLTT--SKNPEIIERDLMEVLPKKEWIAFSHRVILHGRATCVAR 217
Query: 691 KPNCGEC 711
KP C EC
Sbjct: 218 KPRCTEC 224
>UniRef50_A3DEY6 Cluster: Endonuclease III; n=2; Clostridiales|Rep:
Endonuclease III - Clostridium thermocellum (strain ATCC
27405 / DSM 1237)
Length = 213
Score = 53.6 bits (123), Expect = 5e-06
Identities = 27/68 (39%), Positives = 37/68 (54%)
Frame = +1
Query: 508 VTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQP 687
+ GI VDTH R+ NRIG V T P++ L +P E+WS LV G+ +C+
Sbjct: 134 IPGIVVDTHAKRLSNRIGLVN--TDDPKKIEFELMEIVPKEKWSLFCHQLVYHGRAVCKA 191
Query: 688 IKPNCGEC 711
KP C +C
Sbjct: 192 RKPECDKC 199
Score = 53.2 bits (122), Expect = 6e-06
Identities = 25/57 (43%), Positives = 37/57 (64%)
Frame = +2
Query: 320 EELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGPKMAHICM 490
+EL Q I P GF+ K K IK+T I+ E++ G +PD++E L L GVG K A++ +
Sbjct: 72 KELEQDIKPTGFYHNKAKNIKETCKIIVEKFGGKVPDNMEDLLTLPGVGRKTANVIL 128
>UniRef50_O66786 Cluster: Endonuclease III; n=1; Aquifex
aeolicus|Rep: Endonuclease III - Aquifex aeolicus
Length = 232
Score = 53.2 bits (122), Expect = 6e-06
Identities = 24/63 (38%), Positives = 37/63 (58%)
Frame = +1
Query: 523 VDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIKPNC 702
VD HVHR+ RI K+ K P++ + L +P E W++ + LL+ G+TIC+ P C
Sbjct: 155 VDRHVHRVVERISLSKQ--KNPDKMEMELSEIVPQELWTKFSLLLLNHGKTICKARNPEC 212
Query: 703 GEC 711
+C
Sbjct: 213 EKC 215
Score = 49.6 bits (113), Expect = 8e-05
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Frame = +2
Query: 290 TVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGP 469
T ++ + EEL + + + F++ K K IK+ L E Y G++P SV +L KL GVG
Sbjct: 78 TPQDIARANLEELEEDLKHINFYRRKAKLIKECCEKLIELYKGEVPKSVGELVKLPGVGR 137
Query: 470 KMAHICMKVAWNKSLESVLTHMY-IGYAIGLDGSKN 574
K A++ + A+N V H++ + I L KN
Sbjct: 138 KTANMVIGGAYNLPAIIVDRHVHRVVERISLSKQKN 173
>UniRef50_Q8D2L5 Cluster: Nth protein; n=1; Wigglesworthia
glossinidia endosymbiont of Glossina brevipalpis|Rep:
Nth protein - Wigglesworthia glossinidia brevipalpis
Length = 209
Score = 52.8 bits (121), Expect = 8e-06
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Frame = +2
Query: 320 EELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGPKMAHICMKVA 499
E++ I +GF+ K +I K+ IL +++NG IP + L L G+G K A++ + VA
Sbjct: 69 EKIKYYIKSIGFFNRKTDFILKSCNILLKKFNGKIPSKRKHLESLPGIGRKSANVILNVA 128
Query: 500 WNKSLESVLTH-MYIGYAIGLDGSKN 574
+ +V TH + + IGL S N
Sbjct: 129 FGFETIAVDTHVLRVSNRIGLSNSNN 154
Score = 38.7 bits (86), Expect = 0.14
Identities = 25/65 (38%), Positives = 32/65 (49%)
Frame = +1
Query: 517 IGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIKP 696
I VDTHV R+ NRIG E L + +P E + LLV G+ IC+ +P
Sbjct: 134 IAVDTHVLRVSNRIGLSNSNNLRNVEN--TLDNIVPKEFKISCHSLLVLQGRYICKSKRP 191
Query: 697 NCGEC 711
NC C
Sbjct: 192 NCKIC 196
>UniRef50_Q5FJX5 Cluster: Endonuclease III; n=5; Lactobacillus|Rep:
Endonuclease III - Lactobacillus acidophilus
Length = 209
Score = 52.8 bits (121), Expect = 8e-06
Identities = 26/82 (31%), Positives = 46/82 (56%)
Frame = +2
Query: 290 TVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGP 469
T +N+ E++ + I +G +++K K++K+T IL E+YN IP + L L GVG
Sbjct: 65 TPENLADAPIEKIEEDIRTIGLYRSKAKHLKETAKILVEKYNSQIPKDKKSLMTLPGVGE 124
Query: 470 KMAHICMKVAWNKSLESVLTHM 535
K A++ + + +V TH+
Sbjct: 125 KTANVVLAEGYGVPAIAVDTHV 146
Score = 36.7 bits (81), Expect = 0.57
Identities = 19/55 (34%), Positives = 30/55 (54%)
Frame = +1
Query: 508 VTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQ 672
V I VDTHV RI + V + TP E L++ LP ++W + + ++ FG+
Sbjct: 137 VPAIAVDTHVSRISKKFHIVGQ-NATPHEVEQRLEAILPKDEWIKTHHAMILFGR 190
>UniRef50_Q821L1 Cluster: Endonuclease III; n=7; Chlamydiaceae|Rep:
Endonuclease III - Chlamydophila caviae
Length = 214
Score = 50.8 bits (116), Expect = 3e-05
Identities = 26/72 (36%), Positives = 41/72 (56%)
Frame = +2
Query: 320 EELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGPKMAHICMKVA 499
++L +I P G K K Y+ + I+ E+Y G+ P S+E L KL GVG K A + + +
Sbjct: 73 DKLYFIISPCGLGKRKAAYLHDLSKIISEKYRGEPPASLELLTKLPGVGRKTASVFLGII 132
Query: 500 WNKSLESVLTHM 535
+N + V TH+
Sbjct: 133 YNMATFPVDTHI 144
>UniRef50_Q72GF6 Cluster: Endonuclease III; n=3; Bacteria|Rep:
Endonuclease III - Thermus thermophilus (strain HB27 /
ATCC BAA-163 / DSM 7039)
Length = 220
Score = 50.8 bits (116), Expect = 3e-05
Identities = 26/69 (37%), Positives = 37/69 (53%)
Frame = +1
Query: 508 VTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQP 687
V GI VDTHV R+ R+ + + K PE L++ P E W V+ LV G+ +C
Sbjct: 144 VPGIAVDTHVARLARRLCFSE--AKAPERIGKDLEALFPKEDWVFVHHALVLHGRYVCTA 201
Query: 688 IKPNCGECL 714
+P CG C+
Sbjct: 202 RRPRCGACV 210
Score = 43.6 bits (98), Expect = 0.005
Identities = 24/72 (33%), Positives = 38/72 (52%)
Frame = +2
Query: 320 EELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGPKMAHICMKVA 499
EE+ I +G ++TK K + L E+Y G++P E L +L GVG K A + + A
Sbjct: 82 EEVEPYIRRIGLYRTKAKNLVALARRLVEEYGGEVPKEKEALMRLPGVGWKTATVVLGAA 141
Query: 500 WNKSLESVLTHM 535
+ +V TH+
Sbjct: 142 FGVPGIAVDTHV 153
>UniRef50_Q1RGX7 Cluster: Endonuclease III; n=4; Rickettsiales|Rep:
Endonuclease III - Rickettsia bellii (strain RML369-C)
Length = 315
Score = 50.8 bits (116), Expect = 3e-05
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Frame = +2
Query: 290 TVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGP 469
T + +L + +E L + I +G + +K K + IL Y+ +P++ E+L KL GVG
Sbjct: 162 TPEKILGLGEEGLKKYIKSIGLFNSKAKNVIALCQILISNYDSKVPNNFEELVKLPGVGR 221
Query: 470 KMAHICMKVAWNKSLESVLTHMY-IGYAIGL 559
K A++ + + +V TH++ + IGL
Sbjct: 222 KTANVVLNCLFGLPTMAVDTHVFRVAKRIGL 252
Score = 42.3 bits (95), Expect = 0.011
Identities = 25/72 (34%), Positives = 35/72 (48%)
Frame = +1
Query: 496 CLEQVTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQT 675
CL + + VDTHV R+ RIG K TPE L + + S + L+ G+
Sbjct: 230 CLFGLPTMAVDTHVFRVAKRIGLAK--GNTPEAVEKELLQIIDGKWLSHAHHWLILHGRY 287
Query: 676 ICQPIKPNCGEC 711
IC+ KP+C C
Sbjct: 288 ICKARKPDCEIC 299
>UniRef50_Q1Q3W2 Cluster: Similar to endonuclease III; n=1;
Candidatus Kuenenia stuttgartiensis|Rep: Similar to
endonuclease III - Candidatus Kuenenia stuttgartiensis
Length = 226
Score = 50.4 bits (115), Expect = 4e-05
Identities = 24/69 (34%), Positives = 41/69 (59%)
Frame = +2
Query: 332 QLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGPKMAHICMKVAWNKS 511
Q I P GF++ K K I L+E+++G +P+++E+L L GVG K A + + + K
Sbjct: 90 QEIRPTGFYRNKAKNIIACAKALEERFHGKVPETMEELLTLPGVGRKTASVLLGNVFGKQ 149
Query: 512 LESVLTHMY 538
+V TH++
Sbjct: 150 AIAVDTHVF 158
Score = 41.1 bits (92), Expect = 0.027
Identities = 20/66 (30%), Positives = 36/66 (54%)
Frame = +1
Query: 517 IGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIKP 696
I VDTHV R+ +R+ + K P++ + L +P ++W++ ++ G+ C KP
Sbjct: 151 IAVDTHVFRVSHRLDFAK--FNNPDKVEIELCRIIPQKKWTQSCLVMGTHGRLTCIARKP 208
Query: 697 NCGECL 714
C EC+
Sbjct: 209 LCKECV 214
>UniRef50_O51686 Cluster: Endonuclease III; n=3; Borrelia
burgdorferi group|Rep: Endonuclease III - Borrelia
burgdorferi (Lyme disease spirochete)
Length = 222
Score = 50.0 bits (114), Expect = 6e-05
Identities = 26/70 (37%), Positives = 41/70 (58%)
Frame = +2
Query: 323 ELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGPKMAHICMKVAW 502
++ +LIY GF+ K K I + + E++NG IP+++ L KL GVG K A++ + +
Sbjct: 86 DVEKLIYKTGFYSRKAKNIVNCSIDILEKFNGVIPNNIFDLIKLPGVGRKTANVILGSVY 145
Query: 503 NKSLESVLTH 532
NK V TH
Sbjct: 146 NKPAIIVDTH 155
>UniRef50_Q7VFV0 Cluster: Endonuclease III; n=26;
Epsilonproteobacteria|Rep: Endonuclease III -
Helicobacter hepaticus
Length = 230
Score = 49.6 bits (113), Expect = 8e-05
Identities = 28/96 (29%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Frame = +2
Query: 299 NVLSMSD---EELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGP 469
NV ++S E++ LI V F+ K K++ + +NG+IP + +L L GVG
Sbjct: 79 NVATLSQAHLEDIKILIQSVSFFNNKAKHLITMANQVMNDFNGEIPTTQAELKTLAGVGQ 138
Query: 470 KMAHICMKVAWNKSLESVLTHMY-IGYAIGLDGSKN 574
K A++ + + ++ +V TH++ + + +GL G+K+
Sbjct: 139 KTANVVLIEFFEQNYMAVDTHVFRVSHRLGLSGAKS 174
Score = 36.3 bits (80), Expect = 0.76
Identities = 22/65 (33%), Positives = 32/65 (49%)
Frame = +1
Query: 517 IGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIKP 696
+ VDTHV R+ +R+G K+ ET L Q S ++ V FG+ C+ +KP
Sbjct: 154 MAVDTHVFRVSHRLGL--SGAKSALETEKELTQVFK-TQLSTLHQAFVLFGRYTCKALKP 210
Query: 697 NCGEC 711
C C
Sbjct: 211 MCENC 215
>UniRef50_Q2JW22 Cluster: Base excision DNA repair protein, HhH-GPD
family; n=2; Synechococcus|Rep: Base excision DNA repair
protein, HhH-GPD family - Synechococcus sp. (strain
JA-3-3Ab) (Cyanobacteria bacteriumYellowstone A-Prime)
Length = 222
Score = 49.6 bits (113), Expect = 8e-05
Identities = 23/63 (36%), Positives = 36/63 (57%)
Frame = +1
Query: 523 VDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIKPNC 702
VDTHVHR+ NR+G V+ + P++T L +P + ++ L+ G+ IC+ P C
Sbjct: 148 VDTHVHRVANRLGLVR--ARHPDDTFAQLSPRIPAGKAYSLHVNLIRLGKRICKARMPEC 205
Query: 703 GEC 711
G C
Sbjct: 206 GRC 208
>UniRef50_A6PRP8 Cluster: Endonuclease III; n=1; Victivallis
vadensis ATCC BAA-548|Rep: Endonuclease III -
Victivallis vadensis ATCC BAA-548
Length = 212
Score = 49.6 bits (113), Expect = 8e-05
Identities = 24/69 (34%), Positives = 36/69 (52%)
Frame = +1
Query: 505 QVTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQ 684
++ G VDTHV+R+ NRIG V P + + +P E WS + +L+ G+ +C
Sbjct: 132 KIPGFPVDTHVNRLLNRIGLVD--CDDPVKIEAEQNAKVPPELWSNFSHILIQHGRRVCD 189
Query: 685 PIKPNCGEC 711
KP C C
Sbjct: 190 ARKPACDRC 198
Score = 37.9 bits (84), Expect = 0.25
Identities = 18/72 (25%), Positives = 39/72 (54%)
Frame = +2
Query: 320 EELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGPKMAHICMKVA 499
E + ++I G ++ K + + L +++ G++P ++E+L L G+G K A++ + A
Sbjct: 71 ERIAEIIRTCGLYRNKSENLSACAKKLVDEFGGEVPHTMEELTTLPGIGRKSANVVLGDA 130
Query: 500 WNKSLESVLTHM 535
+ V TH+
Sbjct: 131 FKIPGFPVDTHV 142
>UniRef50_Q3AY54 Cluster: Endonuclease III/Nth; n=28; Bacteria|Rep:
Endonuclease III/Nth - Synechococcus sp. (strain CC9902)
Length = 217
Score = 49.2 bits (112), Expect = 1e-04
Identities = 27/89 (30%), Positives = 48/89 (53%)
Frame = +2
Query: 272 LRARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCK 451
L A G T + ++ + E+ I +G KTK K++++ + +L +++G +P+S L
Sbjct: 55 LFAAGPTPQAMAALDETEILSFIRQLGLAKTKAKHVRRLSELLISEHDGAVPNSFRALEA 114
Query: 452 LNGVGPKMAHICMKVAWNKSLESVLTHMY 538
L GVG K A + M A+ V TH++
Sbjct: 115 LPGVGHKTASVVMSQAFGVPAFPVDTHIH 143
>UniRef50_Q0LC20 Cluster: HhH-GPD; n=1; Herpetosiphon aurantiacus
ATCC 23779|Rep: HhH-GPD - Herpetosiphon aurantiacus ATCC
23779
Length = 224
Score = 49.2 bits (112), Expect = 1e-04
Identities = 27/65 (41%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +1
Query: 523 VDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFE-QW-SEVNPLLVGFGQTICQPIKP 696
VDTHVHR+ R+G VK KTP E L LP + +W + L+ GQ IC +P
Sbjct: 147 VDTHVHRVSQRLGLVK--AKTPTEAHEILWQLLPHDAEWLFNYHVALLRHGQRICLAKRP 204
Query: 697 NCGEC 711
C +C
Sbjct: 205 RCNQC 209
>UniRef50_A5KNW1 Cluster: Putative uncharacterized protein; n=6;
Bacteria|Rep: Putative uncharacterized protein -
Ruminococcus torques ATCC 27756
Length = 222
Score = 49.2 bits (112), Expect = 1e-04
Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Frame = +2
Query: 290 TVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGP 469
TV+ + +E+ +++ P G ++K + I +++++Y G +PD + L KL GVG
Sbjct: 71 TVEALAEADVDEIEKIVRPCGLGRSKARDISGCMKMIRDEYEGKVPDDFDALMKLPGVGR 130
Query: 470 KMAHICMKVAWNKSLESVLTH-MYIGYAIGL-DGSK 571
K A++ M + K TH + + IGL DG K
Sbjct: 131 KSANLIMGDVFGKPAIVTDTHCIRLVNRIGLVDGIK 166
>UniRef50_A5FGA8 Cluster: DNA-(Apurinic or apyrimidinic site) lyase;
n=1; Flavobacterium johnsoniae UW101|Rep: DNA-(Apurinic
or apyrimidinic site) lyase - Flavobacterium johnsoniae
UW101
Length = 216
Score = 49.2 bits (112), Expect = 1e-04
Identities = 27/67 (40%), Positives = 36/67 (53%)
Frame = +1
Query: 514 GIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIK 693
GI D HV R+ RIG +K+ +K + L LP WSE+ + G+ IC+P K
Sbjct: 137 GIIADLHVIRVAPRIGIIKE-SKDGNKVEKDLMQALPKSIWSEIGMAISFLGREICRP-K 194
Query: 694 PNCGECL 714
P C ECL
Sbjct: 195 PKCEECL 201
>UniRef50_A7I6B8 Cluster: Endonuclease III; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Endonuclease III -
Methanoregula boonei (strain 6A8)
Length = 220
Score = 49.2 bits (112), Expect = 1e-04
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +1
Query: 484 LYEGCLEQVTGIGVDTHVHRICNRIGWVKKP-TKTPEETRLALQSWLPFEQWSEVNPLLV 660
LY G Q GI VDTHV R+ RIG K E+ +AL P + W ++ + +
Sbjct: 129 LYHG-FGQNHGIAVDTHVRRLAQRIGISDTDDVKVIEQDLMALY---PKKDWGDLTDVFI 184
Query: 661 GFGQTICQPIKPNCGECL 714
G+ C KP CG+C+
Sbjct: 185 AHGRATCDARKPLCGDCV 202
Score = 39.5 bits (88), Expect = 0.081
Identities = 14/52 (26%), Positives = 33/52 (63%)
Frame = +2
Query: 335 LIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGPKMAHICM 490
+I+ +G++ K K+I ++ ++ G++P ++++L + GVG K A+I +
Sbjct: 78 IIHSLGYYHAKAKHIVAAAASVENEFGGEVPRTMDELLSIPGVGRKTANIVL 129
>UniRef50_Q4UK93 Cluster: Endonuclease III (EC 4.2.99.18)
(DNA-(apurinic or apyrimidinic site) lyase); n=14;
Proteobacteria|Rep: Endonuclease III (EC 4.2.99.18)
(DNA-(apurinic or apyrimidinic site) lyase) - Rickettsia
felis (Rickettsia azadi)
Length = 213
Score = 49.2 bits (112), Expect = 1e-04
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Frame = +2
Query: 290 TVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGP 469
T + +L + ++ L + I +G + +K K I IL Y +P+ ++L KL GVG
Sbjct: 60 TTEKILELGEDGLKKYIKSIGLFNSKAKNIIALCKILISNYQSSVPNDFKELIKLPGVGR 119
Query: 470 KMAHICMKVAWNKSLESVLTHMY-IGYAIGL 559
K A++ + + +V TH++ + IGL
Sbjct: 120 KTANVVLNCLFGMPTMAVDTHVFRVAKRIGL 150
Score = 37.9 bits (84), Expect = 0.25
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = +1
Query: 496 CLEQVTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQW-SEVNPLLVGFGQ 672
CL + + VDTHV R+ RIG + +PE L + E+W + + L+ G+
Sbjct: 128 CLFGMPTMAVDTHVFRVAKRIGLAR--GNSPEIVEKELLQIIN-EKWLTHAHHWLILHGR 184
Query: 673 TICQPIKPNCGEC 711
IC+ KP+C C
Sbjct: 185 YICKARKPDCDIC 197
>UniRef50_Q6NJT9 Cluster: Endonuclease III; n=5;
Actinomycetales|Rep: Endonuclease III - Corynebacterium
diphtheriae
Length = 251
Score = 48.8 bits (111), Expect = 1e-04
Identities = 29/87 (33%), Positives = 46/87 (52%)
Frame = +2
Query: 272 LRARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCK 451
L A+ T + S ++ EL ++I P GF+K K ++ L ++G+IP +E L
Sbjct: 67 LFAKYPTAEAYASANEAELQEMIRPTGFYKAKAAHLIGMGQKLVTDFSGEIPRDLESLVS 126
Query: 452 LNGVGPKMAHICMKVAWNKSLESVLTH 532
L GVG K AH+ A++ +V TH
Sbjct: 127 LPGVGRKTAHVVRGNAFDIPGLTVDTH 153
Score = 34.7 bits (76), Expect = 2.3
Identities = 17/77 (22%), Positives = 34/77 (44%)
Frame = +1
Query: 481 YLYEGCLEQVTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLV 660
++ G + G+ VDTH R+ R+G + E +A + ++W+ + ++
Sbjct: 136 HVVRGNAFDIPGLTVDTHFGRLVRRLGLTTQTNPVKVEHEIA--DLIEKKEWTMFSHRII 193
Query: 661 GFGQTICQPIKPNCGEC 711
G+ +C CG C
Sbjct: 194 FHGRRVCHSRTAACGAC 210
>UniRef50_Q1JZE5 Cluster: Endonuclease III; n=1; Desulfuromonas
acetoxidans DSM 684|Rep: Endonuclease III -
Desulfuromonas acetoxidans DSM 684
Length = 211
Score = 48.8 bits (111), Expect = 1e-04
Identities = 22/71 (30%), Positives = 44/71 (61%)
Frame = +2
Query: 323 ELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGPKMAHICMKVAW 502
E+ ++I +G ++ K K+I +L ++++G +PD ++ L +L GVG K A++ + A+
Sbjct: 75 EVEEIIRSIGCYRVKAKHIVAAAQLLCQKFSGQVPDQLDDLIQLPGVGRKTANVVLSNAF 134
Query: 503 NKSLESVLTHM 535
+K V TH+
Sbjct: 135 DKPGFPVDTHV 145
Score = 47.2 bits (107), Expect = 4e-04
Identities = 22/66 (33%), Positives = 31/66 (46%)
Frame = +1
Query: 514 GIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIK 693
G VDTHV R+ R+GW ++ E+ L P W + LL+ G+ IC+
Sbjct: 138 GFPVDTHVKRVARRLGWTRQSDPVKIESELCRYVEPPL--WGHTSHLLIYHGREICKARS 195
Query: 694 PNCGEC 711
P C C
Sbjct: 196 PQCERC 201
>UniRef50_A7DLE4 Cluster: Endonuclease III; n=2; Methylobacterium
extorquens PA1|Rep: Endonuclease III - Methylobacterium
extorquens PA1
Length = 372
Score = 48.8 bits (111), Expect = 1e-04
Identities = 26/83 (31%), Positives = 43/83 (51%)
Frame = +2
Query: 290 TVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGP 469
T +L + +E + I +G + TK K + + IL E++ G +P E L L GVG
Sbjct: 213 TPQKMLDLGEERVRHFIRTIGLFNTKAKNVIALSRILLERHGGAVPCEAEALEVLPGVGT 272
Query: 470 KMAHICMKVAWNKSLESVLTHMY 538
K A + + VA+ +V TH++
Sbjct: 273 KTASVVLNVAFGVPRIAVDTHIF 295
Score = 35.9 bits (79), Expect = 1.00
Identities = 20/68 (29%), Positives = 33/68 (48%)
Frame = +1
Query: 508 VTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQP 687
V I VDTH+ R+ NRI T ++ + L++ +P + L+ G+ IC+
Sbjct: 285 VPRIAVDTHIFRVSNRIPLFS--AATTDKVQAGLEARVPEPFRLNAHHWLILHGRYICKA 342
Query: 688 IKPNCGEC 711
+P C C
Sbjct: 343 RRPECPRC 350
>UniRef50_Q89AW4 Cluster: Endonuclease III (EC 4.2.99.18)
(DNA-(apurinic or apyrimidinic site) lyase); n=2;
Proteobacteria|Rep: Endonuclease III (EC 4.2.99.18)
(DNA-(apurinic or apyrimidinic site) lyase) - Buchnera
aphidicola subsp. Baizongia pistaciae
Length = 215
Score = 48.4 bits (110), Expect = 2e-04
Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 5/102 (4%)
Frame = +2
Query: 266 QRLRARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKL 445
QRL T +S+ + + I +G + K I +T IL ++Y G +P++ E L
Sbjct: 57 QRLFGIANTPSGFISIGLHAIRENIRKLGLYNKKSSNILRTCEILLKRYGGKVPNNREDL 116
Query: 446 CKLNGVGPKMAHICMKVAWNKSLESVLTHMY-----IGYAIG 556
L GVG K A++ + V + K +V TH++ IG+A G
Sbjct: 117 ESLPGVGRKTANVILNVIFKKKTIAVDTHVFRLCNRIGFAKG 158
Score = 42.7 bits (96), Expect = 0.009
Identities = 23/66 (34%), Positives = 34/66 (51%)
Frame = +1
Query: 517 IGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIKP 696
I VDTHV R+CNRIG+ K T E +L + +P + + + G+ IC P
Sbjct: 140 IAVDTHVFRLCNRIGFAKGTTVLTVEKKLL--NIVPEKFKLNFHAWFIMHGRYICTSRVP 197
Query: 697 NCGECL 714
C +C+
Sbjct: 198 KCSKCI 203
>UniRef50_Q8TIX5 Cluster: DNA-(Apurinic or apyrimidinic site) lyase;
n=5; cellular organisms|Rep: DNA-(Apurinic or
apyrimidinic site) lyase - Methanosarcina acetivorans
Length = 256
Score = 48.0 bits (109), Expect = 2e-04
Identities = 24/71 (33%), Positives = 40/71 (56%)
Frame = +2
Query: 290 TVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGP 469
T ++ EL IY GF+K K K IK ++ E++ G++P ++++L L GVG
Sbjct: 103 TAEDYAGADIRELEIDIYSTGFYKNKAKNIKAAAQMIVERFGGEVPKTMKELVTLPGVGR 162
Query: 470 KMAHICMKVAW 502
K A+I + A+
Sbjct: 163 KTANIVLARAF 173
Score = 42.7 bits (96), Expect = 0.009
Identities = 21/69 (30%), Positives = 35/69 (50%)
Frame = +1
Query: 508 VTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQP 687
+ GI VDTHV R+ R+G+ + PE+ L + E ++ L+ G+ +C+
Sbjct: 176 IEGIAVDTHVKRVSRRLGFTRH--SDPEKIEQDLITLARKEDLDSISMTLIYHGRKVCRA 233
Query: 688 IKPNCGECL 714
KP C C+
Sbjct: 234 RKPRCYVCV 242
>UniRef50_A7HGS0 Cluster: Endonuclease III; n=4;
Cystobacterineae|Rep: Endonuclease III -
Anaeromyxobacter sp. Fw109-5
Length = 226
Score = 47.6 bits (108), Expect = 3e-04
Identities = 22/63 (34%), Positives = 32/63 (50%)
Frame = +1
Query: 523 VDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIKPNC 702
VDTHV R+ R+G + + P + L + LP E+W E + L V G+ C +P C
Sbjct: 149 VDTHVGRVSRRLGLTRH--EDPSKVEQDLMALLPEERWGEAHQLFVWHGRRTCDARRPAC 206
Query: 703 GEC 711
C
Sbjct: 207 SRC 209
>UniRef50_O05956 Cluster: Endonuclease III (EC 4.2.99.18)
(DNA-(apurinic or apyrimidinic site) lyase); n=289;
Bacteria|Rep: Endonuclease III (EC 4.2.99.18)
(DNA-(apurinic or apyrimidinic site) lyase) - Rickettsia
prowazekii
Length = 212
Score = 47.6 bits (108), Expect = 3e-04
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Frame = +2
Query: 290 TVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGP 469
T + L + +E L + I +G + +K K I IL + Y IP++ ++L KL GVG
Sbjct: 60 TPEKFLELGEEGLKKYIKSIGLFNSKAKNIIALCQILIKNYQTSIPNNFKELVKLPGVGR 119
Query: 470 KMAHICMKVAWNKSLESVLTHMY-IGYAIGL 559
K A++ + + +V TH++ + IGL
Sbjct: 120 KTANVVLNCLFAMPTMAVDTHVFRVSKRIGL 150
Score = 39.9 bits (89), Expect = 0.061
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = +1
Query: 496 CLEQVTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQW-SEVNPLLVGFGQ 672
CL + + VDTHV R+ RIG K T E L LQ + E+W + + L+ G+
Sbjct: 128 CLFAMPTMAVDTHVFRVSKRIGLAKGNTAAIVEKEL-LQ--IIDEKWLTYAHHWLILHGR 184
Query: 673 TICQPIKPNCGEC 711
IC+ KP C C
Sbjct: 185 YICKARKPGCNIC 197
>UniRef50_Q038W3 Cluster: Predicted EndoIII-related endonuclease;
n=1; Lactobacillus casei ATCC 334|Rep: Predicted
EndoIII-related endonuclease - Lactobacillus casei
(strain ATCC 334)
Length = 215
Score = 47.2 bits (107), Expect = 4e-04
Identities = 23/72 (31%), Positives = 41/72 (56%)
Frame = +2
Query: 320 EELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGPKMAHICMKVA 499
E + +I +G ++TK ++K + IL ++Y G +P+ L +L GVG K A + + A
Sbjct: 70 EAIAAIISRLGLYRTKAAHLKALSDILVKEYAGKVPNKAADLVRLPGVGKKTATVVLSDA 129
Query: 500 WNKSLESVLTHM 535
+N +V TH+
Sbjct: 130 FNIPGVAVDTHV 141
Score = 40.3 bits (90), Expect = 0.046
Identities = 18/55 (32%), Positives = 33/55 (60%)
Frame = +1
Query: 508 VTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQ 672
+ G+ VDTHV RI +G V + TP + + L++ +P +W +++ L+ FG+
Sbjct: 132 IPGVAVDTHVSRIVKGLGLVPQ-NATPVQVQARLEALMPPSEWIKLHRSLIRFGR 185
>UniRef50_Q5V420 Cluster: Endonuclease III; n=5;
Halobacteriaceae|Rep: Endonuclease III - Haloarcula
marismortui (Halobacterium marismortui)
Length = 227
Score = 47.2 bits (107), Expect = 4e-04
Identities = 21/66 (31%), Positives = 41/66 (62%)
Frame = +2
Query: 296 DNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGPKM 475
++ + S+E+L + IY + F K Y++ IL E+++G++PD++ L L GVG K
Sbjct: 68 EDYAAASEEQLAEDIYGITFHNNKGGYLQGIGEILTEEHDGEVPDTMSALTDLPGVGRKT 127
Query: 476 AHICMK 493
A++ ++
Sbjct: 128 ANVVLQ 133
Score = 42.3 bits (95), Expect = 0.011
Identities = 21/69 (30%), Positives = 34/69 (49%)
Frame = +1
Query: 508 VTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQP 687
V GI VDTHV R+ R+ ++ + PE L +P +W + LL+ G+ +C
Sbjct: 139 VEGIVVDTHVQRLSRRLELTEE--ERPEAIEQDLLDVVPESEWQQFTHLLIDHGRAVCGA 196
Query: 688 IKPNCGECL 714
+C C+
Sbjct: 197 RSADCEACV 205
>UniRef50_UPI000049880C Cluster: endonuclease III; n=1; Entamoeba
histolytica HM-1:IMSS|Rep: endonuclease III - Entamoeba
histolytica HM-1:IMSS
Length = 304
Score = 46.8 bits (106), Expect = 5e-04
Identities = 22/74 (29%), Positives = 43/74 (58%)
Frame = +2
Query: 287 LTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVG 466
LT + + S++ L +L+ K+K+I + + ++ YN +PD++++L KL G+G
Sbjct: 88 LTPEIMSKASEDILNELLDGCYGKVRKIKFILECSKVIHNNYNDIVPDNIDELKKLPGIG 147
Query: 467 PKMAHICMKVAWNK 508
PK+A I + + K
Sbjct: 148 PKLAKIICAIGFKK 161
Score = 46.4 bits (105), Expect = 7e-04
Identities = 19/70 (27%), Positives = 36/70 (51%)
Frame = +1
Query: 502 EQVTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTIC 681
+++ GI VD + +R+ W+ K T + ++ WLP E W+ + + F + +C
Sbjct: 160 KKIEGITVDQRSLLLLHRLEWILKDTSNDNDAMKEVEEWLPKEHWNYFSKDTILFAKYLC 219
Query: 682 QPIKPNCGEC 711
+P P C +C
Sbjct: 220 KP-NPLCDQC 228
>UniRef50_A5VZI4 Cluster: Endonuclease III; n=6; Pseudomonas|Rep:
Endonuclease III - Pseudomonas putida F1
Length = 335
Score = 46.4 bits (105), Expect = 7e-04
Identities = 25/93 (26%), Positives = 49/93 (52%)
Frame = +2
Query: 260 AMQRLRARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVE 439
A RL T + + ++ E L + I +G + +K K + + +L E+++ +P + E
Sbjct: 173 ATARLFPVANTPEAIYALGVEGLSEYIKTIGLYNSKAKNVIEACRLLIERHDSQVPQTRE 232
Query: 440 KLCKLNGVGPKMAHICMKVAWNKSLESVLTHMY 538
L L GVG K A++ + A+ + +V TH++
Sbjct: 233 ALEALPGVGRKTANVVLNTAFRQPAMAVDTHIF 265
Score = 46.4 bits (105), Expect = 7e-04
Identities = 23/65 (35%), Positives = 34/65 (52%)
Frame = +1
Query: 517 IGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIKP 696
+ VDTH+ R+ NR G P KT E L ++P + + + L+ G+ +CQ KP
Sbjct: 258 MAVDTHIFRVSNRTGIA--PGKTVLEVEKKLVKFVPKDYLLDAHHWLILHGRYVCQARKP 315
Query: 697 NCGEC 711
CG C
Sbjct: 316 RCGSC 320
>UniRef50_A4YJP3 Cluster: Endonuclease III DNA-(Apurinic or
apyrimidinic site) lyase; n=8; Alphaproteobacteria|Rep:
Endonuclease III DNA-(Apurinic or apyrimidinic site)
lyase - Bradyrhizobium sp. (strain ORS278)
Length = 277
Score = 46.4 bits (105), Expect = 7e-04
Identities = 26/66 (39%), Positives = 33/66 (50%)
Frame = +1
Query: 517 IGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIKP 696
+ VDTHV R+ NR G P KTP E L L+ +P E + L+ G+ C KP
Sbjct: 202 MAVDTHVFRVGNRTGLA--PGKTPLEVELGLEKVIPAEFMLHAHHWLILHGRYTCLARKP 259
Query: 697 NCGECL 714
C CL
Sbjct: 260 RCELCL 265
Score = 45.6 bits (103), Expect = 0.001
Identities = 25/95 (26%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Frame = +2
Query: 290 TVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGP 469
T +L++ ++ + I VG ++TK K + + L ++ G++P + +L L G G
Sbjct: 127 TPQKMLALGEDTVRDYIKTVGLFRTKAKNVIALSQKLIAEFGGEVPRTRAELESLPGAGR 186
Query: 470 KMAHICMKVAWNKSLESVLTHMY-IGYAIGLDGSK 571
K A++ + +A+ + +V TH++ +G GL K
Sbjct: 187 KTANVVLNMAFGEHTMAVDTHVFRVGNRTGLAPGK 221
>UniRef50_P73715 Cluster: Endonuclease III (EC 4.2.99.18)
(DNA-(apurinic or apyrimidinic site) lyase); n=11;
Bacteria|Rep: Endonuclease III (EC 4.2.99.18)
(DNA-(apurinic or apyrimidinic site) lyase) -
Synechocystis sp. (strain PCC 6803)
Length = 219
Score = 46.4 bits (105), Expect = 7e-04
Identities = 22/68 (32%), Positives = 32/68 (47%)
Frame = +1
Query: 508 VTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQP 687
+ G+ VDTHV R+ R+G K P L +P W + ++ G+ +C
Sbjct: 142 LAGVTVDTHVKRLSQRLGLTK--ATDPIRIERDLMKLIPQPDWENFSIHIIYHGRAVCAA 199
Query: 688 IKPNCGEC 711
KP CGEC
Sbjct: 200 RKPLCGEC 207
Score = 46.0 bits (104), Expect = 0.001
Identities = 22/69 (31%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = +2
Query: 299 NVLSMSD-EELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGPKM 475
N L+ D +E+ +LI+ GF++ K K I+ + E+++G++P +E+L L GV K
Sbjct: 71 NALAYGDRQEIEELIHSTGFFRNKAKNIQGACRKIVEEFDGEVPQRMEELLTLPGVARKT 130
Query: 476 AHICMKVAW 502
A++ + A+
Sbjct: 131 ANVVLAHAF 139
>UniRef50_A5VHZ3 Cluster: Endonuclease III; n=2; Lactobacillus
reuteri|Rep: Endonuclease III - Lactobacillus reuteri
F275
Length = 213
Score = 46.0 bits (104), Expect = 0.001
Identities = 21/71 (29%), Positives = 42/71 (59%)
Frame = +2
Query: 323 ELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGPKMAHICMKVAW 502
E+ I +G ++ K K++ KT+ + +NG++P ++++L L+GVG K+A + + +
Sbjct: 72 EVEPYIKRLGLYRNKAKFLVKTSQQIVTDFNGEVPHTLKELITLSGVGRKVADVVLAECF 131
Query: 503 NKSLESVLTHM 535
N V TH+
Sbjct: 132 NIPAFPVDTHV 142
Score = 38.3 bits (85), Expect = 0.19
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = +1
Query: 523 VDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIKPNC 702
VDTHV R+ R+ V+ P + L +P E W + + ++ +G+ +C P C
Sbjct: 138 VDTHVSRVARRLRMVE-PKASVLAIEKKLMKTIPPEHWLDAHHSMIFWGRYVCTARNPKC 196
Query: 703 GEC 711
C
Sbjct: 197 QTC 199
>UniRef50_Q8G779 Cluster: Endonuclease III; n=1; Bifidobacterium
longum|Rep: Endonuclease III - Bifidobacterium longum
Length = 228
Score = 45.6 bits (103), Expect = 0.001
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Frame = +1
Query: 508 VTGIGVDTHVHRICNRIGWV---KKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTI 678
+ G VDTHV R+ R+ W + P + + S P E+W+ ++ L+ FG+
Sbjct: 138 IPGFPVDTHVMRVTGRLRWRSDWRSAHPDPVKIEKEITSCFPPEEWTNLSHRLILFGRAT 197
Query: 679 CQPIKPNCGEC 711
C P+C C
Sbjct: 198 CHARTPDCANC 208
Score = 45.2 bits (102), Expect = 0.002
Identities = 24/93 (25%), Positives = 52/93 (55%)
Frame = +2
Query: 257 TAMQRLRARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSV 436
T L A T ++ + + ++ +I+P+GF+++K +++ L E++ G +P ++
Sbjct: 55 TVTPELFATYPTARDLAAANPAQVEDIIHPLGFYRSKTQHLIGLATALDERFGGVVPRTM 114
Query: 437 EKLCKLNGVGPKMAHICMKVAWNKSLESVLTHM 535
++L L GVG K A++ + A++ V TH+
Sbjct: 115 DELTSLPGVGRKTANVVLGNAFDIPGFPVDTHV 147
>UniRef50_A4B3H0 Cluster: Endonuclease III/Nth; n=20; Bacteria|Rep:
Endonuclease III/Nth - Alteromonas macleodii 'Deep
ecotype'
Length = 237
Score = 45.6 bits (103), Expect = 0.001
Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 1/103 (0%)
Frame = +2
Query: 269 RLRARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLC 448
+L AR +++ M+ EE+ +I P G K K I + ++ +Q+NG++P S E L
Sbjct: 61 KLFARADNPYDMVMMTIEEIQDIIRPCGLSPMKSKGIWHLSDMIIKQHNGEVPASFEALE 120
Query: 449 KLNGVGPKMAHICMKVAWNKSLESVLTHMY-IGYAIGLDGSKN 574
+ VG K A + M + V TH++ + Y GL K+
Sbjct: 121 AMPAVGHKTAAVVMSQGFGIPAFPVDTHIHRLMYRWGLSNGKS 163
Score = 36.7 bits (81), Expect = 0.57
Identities = 17/64 (26%), Positives = 34/64 (53%)
Frame = +1
Query: 523 VDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIKPNC 702
VDTH+HR+ R W K+ E+T + P E+W++++ ++ +G+ C +
Sbjct: 145 VDTHIHRLMYR--WGLSNGKSVEQTERDAKRLFPKERWNDLHLQIILYGREYCPARGFDL 202
Query: 703 GECL 714
+C+
Sbjct: 203 NKCI 206
>UniRef50_A3CUC0 Cluster: Endonuclease III; n=3;
Methanomicrobiales|Rep: Endonuclease III -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 218
Score = 45.6 bits (103), Expect = 0.001
Identities = 22/67 (32%), Positives = 34/67 (50%)
Frame = +1
Query: 514 GIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIK 693
GI VDTHV R+ R+G+ + P+ L + P E W ++N LL+ G+ +C
Sbjct: 138 GIAVDTHVRRVSKRLGFTD--STNPDIIERDLVALFPEEVWRDINYLLIRHGRAVCTAKN 195
Query: 694 PNCGECL 714
P C+
Sbjct: 196 PKHEVCV 202
Score = 44.8 bits (101), Expect = 0.002
Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Frame = +2
Query: 272 LRARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCK 451
L +R T + + EE+ LI +GF K +YI L ++ G++P ++E+L
Sbjct: 57 LFSRYPTPEALARAEPEEVEPLIRTIGFHHAKARYIVGAARKLVAEFGGEVPRTMEELQT 116
Query: 452 LNGVGPKMAHICMKVAWNKSLE-SVLTHM-YIGYAIGLDGSKN 574
L GVG K A+I + A++ ++ +V TH+ + +G S N
Sbjct: 117 LPGVGRKTANIVLSHAFDINVGIAVDTHVRRVSKRLGFTDSTN 159
>UniRef50_Q7VR51 Cluster: Endonuclease III; n=1; Candidatus
Blochmannia floridanus|Rep: Endonuclease III -
Blochmannia floridanus
Length = 213
Score = 45.2 bits (102), Expect = 0.002
Identities = 25/83 (30%), Positives = 46/83 (55%)
Frame = +2
Query: 290 TVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGP 469
T ++L++ + + Q I +G + +K + + K +L QYNG +P +L L G+G
Sbjct: 62 TPQSMLNLGVDGVKQHIKCIGLFNSKSENLIKICNLLINQYNGIVPKKRLELESLPGIGR 121
Query: 470 KMAHICMKVAWNKSLESVLTHMY 538
K A+I + V + S +V TH++
Sbjct: 122 KTANIILNVCFGLSTIAVDTHVF 144
Score = 36.7 bits (81), Expect = 0.57
Identities = 22/66 (33%), Positives = 30/66 (45%)
Frame = +1
Query: 517 IGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIKP 696
I VDTHV R CNR + E + L S +P E + LV G+ C+ P
Sbjct: 137 IAVDTHVFRFCNRSCFASGHNVIAVERK--LMSVVPREFKRNCHRWLVKHGRYTCKSKNP 194
Query: 697 NCGECL 714
+C C+
Sbjct: 195 DCNNCI 200
>UniRef50_Q1YF33 Cluster: Endonuclease III; n=5;
Alphaproteobacteria|Rep: Endonuclease III - Aurantimonas
sp. SI85-9A1
Length = 265
Score = 45.2 bits (102), Expect = 0.002
Identities = 27/105 (25%), Positives = 50/105 (47%), Gaps = 1/105 (0%)
Frame = +2
Query: 260 AMQRLRARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVE 439
A + L A T +L + +E + + I P G + K + + + L + + G +P
Sbjct: 100 AAEALFAMATTPQAMLVLGEEAIARAIRPCGLYNMKARNLTRLCQALLQTHGGVVPQDRA 159
Query: 440 KLCKLNGVGPKMAHICMKVAWNKSLESVLTHMY-IGYAIGLDGSK 571
L L GVG K A I + + + + +V TH++ + IGL ++
Sbjct: 160 GLMALPGVGRKCADIVLSFTFGQDVIAVDTHVHRVANRIGLTAAR 204
Score = 41.5 bits (93), Expect = 0.020
Identities = 22/66 (33%), Positives = 33/66 (50%)
Frame = +1
Query: 517 IGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIKP 696
I VDTHVHR+ NRIG +LA ++ P + + L+ FG+ +C +P
Sbjct: 185 IAVDTHVHRVANRIGLTAARGADATADQLAARA--PDWAQGDGHFWLIQFGKAVCVARRP 242
Query: 697 NCGECL 714
C C+
Sbjct: 243 RCEACM 248
>UniRef50_A4YIJ7 Cluster: DNA-(Apurinic or apyrimidinic site) lyase;
n=1; Metallosphaera sedula DSM 5348|Rep: DNA-(Apurinic
or apyrimidinic site) lyase - Metallosphaera sedula DSM
5348
Length = 230
Score = 45.2 bits (102), Expect = 0.002
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 9/104 (8%)
Frame = +2
Query: 284 GLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDI--------PDSVE 439
G+T + + E + + I VG K K IK+ + + +Y GDI P + E
Sbjct: 65 GITAEGLSRADPEVIKRCIRKVGLHNNKTKVIKEVSTKILNEYGGDINKVLDLGLPKARE 124
Query: 440 KLCKLNGVGPKMAHICMKVAWNKSLESVLTHMY-IGYAIGLDGS 568
KL +L GVG K A + + + + + TH++ I +G+DG+
Sbjct: 125 KLVELPGVGKKTADVLLITCRDYPVFPIDTHIFRISKRLGIDGN 168
>UniRef50_P63541 Cluster: Endonuclease III (EC 4.2.99.18)
(DNA-(apurinic or apyrimidinic site) lyase); n=41;
Actinobacteridae|Rep: Endonuclease III (EC 4.2.99.18)
(DNA-(apurinic or apyrimidinic site) lyase) -
Mycobacterium bovis
Length = 245
Score = 45.2 bits (102), Expect = 0.002
Identities = 28/87 (32%), Positives = 44/87 (50%)
Frame = +2
Query: 272 LRARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCK 451
L AR T + EL LI P GF++ K + L E++ G++P +++KL
Sbjct: 65 LFARYRTARDYAQADRTELESLIRPTGFYRNKAASLIGLGQALVERFGGEVPATMDKLVT 124
Query: 452 LNGVGPKMAHICMKVAWNKSLESVLTH 532
L GVG K A++ + A+ +V TH
Sbjct: 125 LPGVGRKTANVILGNAFGIPGITVDTH 151
Score = 40.3 bits (90), Expect = 0.046
Identities = 18/69 (26%), Positives = 35/69 (50%)
Frame = +1
Query: 508 VTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQP 687
+ GI VDTH R+ R W + P + A+ + ++W+ ++ ++ G+ +C
Sbjct: 143 IPGITVDTHFGRLVRRWRWTT--AEDPVKVEQAVGELIERKEWTLLSHRVIFHGRRVCHA 200
Query: 688 IKPNCGECL 714
+P CG C+
Sbjct: 201 RRPACGVCV 209
>UniRef50_Q38X63 Cluster: Putative DNA repair protein, endonuclease
III; n=1; Lactobacillus sakei subsp. sakei 23K|Rep:
Putative DNA repair protein, endonuclease III -
Lactobacillus sakei subsp. sakei (strain 23K)
Length = 216
Score = 44.8 bits (101), Expect = 0.002
Identities = 20/68 (29%), Positives = 33/68 (48%)
Frame = +1
Query: 508 VTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQP 687
V VDTHV RI R+ + + + Q+ LP ++W + + L+ FG+ +C
Sbjct: 133 VPSFAVDTHVSRIAKRLT-ISAENASVRQIETDFQTKLPQKEWVQAHHTLILFGRQVCTA 191
Query: 688 IKPNCGEC 711
P C +C
Sbjct: 192 RNPKCNQC 199
Score = 37.5 bits (83), Expect = 0.33
Identities = 20/66 (30%), Positives = 36/66 (54%)
Frame = +2
Query: 338 IYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGPKMAHICMKVAWNKSLE 517
I +G + K K+I+ L + G++P + +L +L GVG K A++ + A+N
Sbjct: 77 IRSIGLYHNKAKHIRTCCQQLITDFGGEVPQTHAELEQLAGVGRKTANVVLGDAFNVPSF 136
Query: 518 SVLTHM 535
+V TH+
Sbjct: 137 AVDTHV 142
>UniRef50_O32331 Cluster: Putative endonuclease III; n=1;
Clostridium butyricum|Rep: Putative endonuclease III -
Clostridium butyricum
Length = 113
Score = 44.8 bits (101), Expect = 0.002
Identities = 20/70 (28%), Positives = 42/70 (60%)
Frame = +2
Query: 293 VDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGPK 472
+D L ++++EL + I +G ++ K K + +KE++NG++P ++E + L G G K
Sbjct: 36 LDAFLEITNDELEERIKQIGLYRNKSKNLILMFRQIKEKFNGEVPTTMEGITSLAGAGRK 95
Query: 473 MAHICMKVAW 502
A++ + A+
Sbjct: 96 TANVVLSNAF 105
>UniRef50_A3H933 Cluster: HhH-GPD; n=1; Caldivirga maquilingensis
IC-167|Rep: HhH-GPD - Caldivirga maquilingensis IC-167
Length = 230
Score = 44.4 bits (100), Expect = 0.003
Identities = 31/111 (27%), Positives = 58/111 (52%), Gaps = 11/111 (9%)
Frame = +2
Query: 266 QRLRAR--GLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDI----- 424
+RL+ R +T + +LS+S EL ++ P+G ++ + + + + + E+YNG +
Sbjct: 58 ERLKERLGSITPNTILSLSKSELENILRPIGSFRQRARRLIELANTVNEKYNGSLEFIRG 117
Query: 425 ---PDSVEKLCKLNGVGPKMAHICMKVAWNKSLESVLTH-MYIGYAIGLDG 565
++ L L GVGPK A + + + K + V TH M I + +G+ G
Sbjct: 118 MGTDEARRTLMNLPGVGPKTADVVL-LNLGKPVFPVDTHIMRISHRLGVMG 167
>UniRef50_A0B7M5 Cluster: HhH-GPD family protein; n=1; Methanosaeta
thermophila PT|Rep: HhH-GPD family protein -
Methanosaeta thermophila (strain DSM 6194 / PT)
(Methanothrixthermophila (strain DSM 6194 / PT))
Length = 219
Score = 44.4 bits (100), Expect = 0.003
Identities = 21/68 (30%), Positives = 39/68 (57%)
Frame = +1
Query: 508 VTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQP 687
++ + VDTHV+R+ R+G V + EET+ L+ P E++ ++ L+ G+ +C+
Sbjct: 139 MSAMPVDTHVYRVSRRMGLVPENASI-EETQRILEEITPHEKYISLHINLIRHGRLVCKA 197
Query: 688 IKPNCGEC 711
P C +C
Sbjct: 198 RNPLCKKC 205
Score = 36.3 bits (80), Expect = 0.76
Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 9/102 (8%)
Frame = +2
Query: 260 AMQRLRARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNG-DIP--- 427
A ++L+ R + +L+ S+EE+ I P G K IK L++ + D+
Sbjct: 48 AFEQLKRRFGSYTEILNASEEEIADAIRPGGLADIKAARIKGALERLRDDFGSVDLSPLK 107
Query: 428 --DSVEK---LCKLNGVGPKMAHICMKVAWNKSLESVLTHMY 538
+VE L + G+GPK A + M + S V TH+Y
Sbjct: 108 RMSAVEARNYLKSIPGIGPKTASVLMLFGFGMSAMPVDTHVY 149
>UniRef50_A5D023 Cluster: Predicted EndoIII-related endonuclease;
n=2; Peptococcaceae|Rep: Predicted EndoIII-related
endonuclease - Pelotomaculum thermopropionicum SI
Length = 230
Score = 44.0 bits (99), Expect = 0.004
Identities = 22/63 (34%), Positives = 31/63 (49%)
Frame = +1
Query: 523 VDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIKPNC 702
VDTHV+R+ R+G + K PEE L +P Q + L+ G+ +C KP C
Sbjct: 157 VDTHVYRVARRLGLSE--AKRPEEVEEELAGLIPPPQRMAAHHRLIAHGRQVCSARKPAC 214
Query: 703 GEC 711
C
Sbjct: 215 HRC 217
Score = 39.9 bits (89), Expect = 0.061
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Frame = +2
Query: 290 TVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGP 469
T ++S EEL I G + K ++I + + L +++ G +P + L L GVG
Sbjct: 80 TPQEFAALSPEELAGEIKGCGLHRVKSRHIIEASRELVKRHGGLVPQDRKALEALPGVGR 139
Query: 470 KMAHICMKVAWNKSLESVLTHMY-IGYAIGLDGSK 571
K A + + VA+ V TH+Y + +GL +K
Sbjct: 140 KTAGVVLGVAFGGCELPVDTHVYRVARRLGLSEAK 174
>UniRef50_Q971F2 Cluster: 224aa long hypothetical endonuclease III;
n=1; Sulfolobus tokodaii|Rep: 224aa long hypothetical
endonuclease III - Sulfolobus tokodaii
Length = 224
Score = 44.0 bits (99), Expect = 0.004
Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 6/104 (5%)
Frame = +2
Query: 284 GLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIP----DSVEKL-C 448
G+TVD +LS+S++EL ++I VG +K +YIK K ++ D + +L
Sbjct: 64 GVTVDKILSISEDELKEVIKIVGLSNSKARYIKNIALFFKRNKIDELTRLPCDKLRELFL 123
Query: 449 KLNGVGPKMAHICMKVAWNKSLESVLTHM-YIGYAIGLDGSKNQ 577
++G+G K A + + + V TH+ + +G+ GSK Q
Sbjct: 124 TVDGIGEKTADVVLVNCFKCKFFPVDTHIKRVMSRLGILGSKPQ 167
>UniRef50_Q6T7F7 Cluster: MutY; n=15; Gammaproteobacteria|Rep: MutY
- Pseudomonas fluorescens
Length = 358
Score = 43.6 bits (98), Expect = 0.005
Identities = 24/71 (33%), Positives = 40/71 (56%)
Frame = +2
Query: 254 LTAMQRLRARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDS 433
L R A TV + + ++E+ L +G++ T+ + ++KT I+ EQY G+ P
Sbjct: 52 LNYFDRFMASLPTVQALAAAPEDEVLHLWTGLGYY-TRARNLQKTAKIVVEQYGGEFPRD 110
Query: 434 VEKLCKLNGVG 466
VEKL +L G+G
Sbjct: 111 VEKLTELPGIG 121
>UniRef50_Q8F482 Cluster: Endonuclease III; n=4; Leptospira|Rep:
Endonuclease III - Leptospira interrogans
Length = 118
Score = 43.2 bits (97), Expect = 0.007
Identities = 22/69 (31%), Positives = 36/69 (52%)
Frame = +1
Query: 508 VTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQP 687
V GI VDTHV+R+ +G K P + L S LP + W +++ L+ G+ C+
Sbjct: 38 VEGIVVDTHVNRLSKVLGLTTK--NDPVQVEKDLMSLLPEKYWRDISLYLIFLGRKSCKA 95
Query: 688 IKPNCGECL 714
+ C +C+
Sbjct: 96 HRRFCEDCI 104
>UniRef50_Q1FM66 Cluster: Endonuclease III; n=1; Clostridium
phytofermentans ISDg|Rep: Endonuclease III - Clostridium
phytofermentans ISDg
Length = 229
Score = 43.2 bits (97), Expect = 0.007
Identities = 23/82 (28%), Positives = 44/82 (53%)
Frame = +2
Query: 290 TVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGP 469
+V++ + EL + I+ GF++ K K I L +Y+G++P+ ++ L L GVG
Sbjct: 75 SVEDFANADLSELEKDIHSTGFYRNKAKNIIACCQTLLREYHGEVPNDIDALTNLAGVGR 134
Query: 470 KMAHICMKVAWNKSLESVLTHM 535
K A++ +++ V TH+
Sbjct: 135 KTANVIRGNIFHEPSIVVDTHV 156
Score = 43.2 bits (97), Expect = 0.007
Identities = 22/65 (33%), Positives = 31/65 (47%)
Frame = +1
Query: 517 IGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIKP 696
I VDTHV RI ++G+ K+ P + L LP E W N ++ G+ +C P
Sbjct: 150 IVVDTHVKRISKKLGFTKEDD--PVKVEYDLMKILPREHWILYNIQIITHGRGLCTARSP 207
Query: 697 NCGEC 711
C C
Sbjct: 208 QCDRC 212
>UniRef50_A1G5J4 Cluster: Endonuclease III precursor; n=4;
Actinobacteria (class)|Rep: Endonuclease III precursor -
Salinispora arenicola CNS205
Length = 305
Score = 43.2 bits (97), Expect = 0.007
Identities = 21/68 (30%), Positives = 33/68 (48%)
Frame = +1
Query: 508 VTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQP 687
V GI VDTH +R+ R W P + A+ + P W+ ++ ++ G+ +C
Sbjct: 188 VPGITVDTHFNRLVRR--WRLTTETDPVKIEHAIGALYPKRDWTMLSHRIIFHGRRVCHA 245
Query: 688 IKPNCGEC 711
KP CG C
Sbjct: 246 RKPACGAC 253
Score = 41.5 bits (93), Expect = 0.020
Identities = 23/70 (32%), Positives = 39/70 (55%)
Frame = +2
Query: 323 ELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGPKMAHICMKVAW 502
EL +LI P GF++ K + K L E+++G +P + L L G+G K A++ + A+
Sbjct: 127 ELEELIRPTGFYRNKTDSLIKLGQGLVERHDGRVPGKLTDLVHLPGIGRKTANVILGNAF 186
Query: 503 NKSLESVLTH 532
+ +V TH
Sbjct: 187 DVPGITVDTH 196
>UniRef50_Q2JQP9 Cluster: Endonuclease III; n=13; Bacteria|Rep:
Endonuclease III - Synechococcus sp. (strain JA-3-3Ab)
(Cyanobacteria bacteriumYellowstone A-Prime)
Length = 231
Score = 42.7 bits (96), Expect = 0.009
Identities = 22/66 (33%), Positives = 31/66 (46%)
Frame = +1
Query: 514 GIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIK 693
G+ VDTHV R+ R+G + + P L LP W + L+ G+ IC K
Sbjct: 140 GVTVDTHVKRLSRRLGLTEH--EDPVRIERDLMQLLPQADWENWSIRLIEHGRAICTARK 197
Query: 694 PNCGEC 711
P C +C
Sbjct: 198 PLCEQC 203
Score = 41.9 bits (94), Expect = 0.015
Identities = 19/61 (31%), Positives = 35/61 (57%)
Frame = +2
Query: 320 EELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGPKMAHICMKVA 499
EE+ LI P GF++ K K+I++ + + G +P ++ +L L GV K A++ + A
Sbjct: 75 EEIEALIRPTGFYRNKAKHIQEACRKIVTDFGGQVPRTMPELLTLPGVARKTANVVLAHA 134
Query: 500 W 502
+
Sbjct: 135 F 135
>UniRef50_Q0LEY5 Cluster: HhH-GPD; n=1; Herpetosiphon aurantiacus
ATCC 23779|Rep: HhH-GPD - Herpetosiphon aurantiacus ATCC
23779
Length = 222
Score = 42.7 bits (96), Expect = 0.009
Identities = 19/63 (30%), Positives = 34/63 (53%)
Frame = +1
Query: 523 VDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIKPNC 702
VDTH+HR+ R+G + P + + L+S +P +Q + + ++ G+ IC +P C
Sbjct: 146 VDTHIHRVAKRVGMI-GPKVSADAAHDLLESAVPVDQMYQFHVSVLLHGRQICHAQRPAC 204
Query: 703 GEC 711
C
Sbjct: 205 ERC 207
Score = 33.5 bits (73), Expect = 5.3
Identities = 32/114 (28%), Positives = 49/114 (42%), Gaps = 10/114 (8%)
Frame = +2
Query: 260 AMQRLRARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVE 439
A + L+ R T VL+ EL + I G K K I+ T ++ EQ D +
Sbjct: 50 AFRELKGRYPTWAAVLNAESSELEETIRVGGLAKIKAARIQNTLAVILEQRGEFSLDFLR 109
Query: 440 KL---------CKLNGVGPKMAHICMKVAWNKSLESVLTHMY-IGYAIGLDGSK 571
+L L G+GPK A + A N+ V TH++ + +G+ G K
Sbjct: 110 ELGLHEARAWLTALPGIGPKTAGCVLCFACNQPAMIVDTHIHRVAKRVGMIGPK 163
>UniRef50_A4XHC4 Cluster: HhH-GPD family protein; n=1;
Caldicellulosiruptor saccharolyticus DSM 8903|Rep:
HhH-GPD family protein - Caldicellulosiruptor
saccharolyticus (strain ATCC 43494 / DSM 8903)
Length = 224
Score = 42.7 bits (96), Expect = 0.009
Identities = 18/50 (36%), Positives = 29/50 (58%)
Frame = +2
Query: 275 RARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDI 424
+A L+++ +L DE L QLI P G++ K K +K LK ++N D+
Sbjct: 58 KANILSIEGILQTPDEILAQLIRPTGYYNQKAKRLKDFCSFLKNEFNSDL 107
>UniRef50_Q8TYU8 Cluster: Predicted EndoIII-related endonuclease;
n=1; Methanopyrus kandleri|Rep: Predicted
EndoIII-related endonuclease - Methanopyrus kandleri
Length = 233
Score = 42.3 bits (95), Expect = 0.011
Identities = 22/63 (34%), Positives = 34/63 (53%)
Frame = +1
Query: 523 VDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIKPNC 702
VDTHV R+ R+G +K E + A+ +P + + + L+ FG+ IC+P KP C
Sbjct: 160 VDTHVARVSRRLGLTD--SKEYFEVQEAVHEMVPEGERGKAHLALIQFGREICRPRKPQC 217
Query: 703 GEC 711
C
Sbjct: 218 ELC 220
>UniRef50_Q2JMR3 Cluster: Endonuclease III; n=7; Bacteria|Rep:
Endonuclease III - Synechococcus sp. (strain
JA-2-3B'a(2-13)) (Cyanobacteria bacteriumYellowstone
B-Prime)
Length = 234
Score = 41.9 bits (94), Expect = 0.015
Identities = 21/66 (31%), Positives = 31/66 (46%)
Frame = +1
Query: 514 GIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIK 693
G+ VDTHV R+ R+G + + P L LP W + L+ G+ IC +
Sbjct: 140 GVTVDTHVKRLSRRLGLTEH--EDPVRIEKDLMQLLPQADWENWSIRLIDHGRAICTARR 197
Query: 694 PNCGEC 711
P C +C
Sbjct: 198 PLCQQC 203
Score = 40.7 bits (91), Expect = 0.035
Identities = 18/61 (29%), Positives = 35/61 (57%)
Frame = +2
Query: 320 EELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGPKMAHICMKVA 499
EE+ LI+ GF++ K K+I++ + + G +P ++ +L L GV K A++ + A
Sbjct: 75 EEIEALIHSTGFYRNKAKHIQEACRRILSHFGGQVPRTMPELLTLPGVARKTANVVLAHA 134
Query: 500 W 502
+
Sbjct: 135 F 135
>UniRef50_Q9Z8E1 Cluster: Adenine Glycosylase; n=4;
Chlamydophila|Rep: Adenine Glycosylase - Chlamydia
pneumoniae (Chlamydophila pneumoniae)
Length = 369
Score = 41.5 bits (93), Expect = 0.020
Identities = 17/78 (21%), Positives = 46/78 (58%)
Frame = +2
Query: 290 TVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGP 469
T++++ + +E++ +L +G++ ++ +++ + ++ E+++G IPD L ++ GVGP
Sbjct: 68 TIESLAAAKEEDVIKLWEGLGYY-SRARHLLEGARMVMEEFHGKIPDDAISLAQIRGVGP 126
Query: 470 KMAHICMKVAWNKSLESV 523
H + A+ + +V
Sbjct: 127 YTVHAILAFAFKRRAAAV 144
>UniRef50_Q4FPF4 Cluster: A/G-specific adenine glycosylase; n=2;
Candidatus Pelagibacter ubique|Rep: A/G-specific adenine
glycosylase - Pelagibacter ubique
Length = 326
Score = 41.5 bits (93), Expect = 0.020
Identities = 18/54 (33%), Positives = 38/54 (70%)
Frame = +2
Query: 347 VGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGPKMAHICMKVAWNK 508
+G++ ++VK +KKT IL++ +N +P+++++L L G+G ++ M +A+NK
Sbjct: 83 LGYY-SRVKNLKKTAQILEKNFNRRLPNTIDELKLLPGIGDYTSNAIMAIAFNK 135
>UniRef50_Q1FHV1 Cluster: A/G-specific adenine glycosylase; n=1;
Clostridium phytofermentans ISDg|Rep: A/G-specific
adenine glycosylase - Clostridium phytofermentans ISDg
Length = 350
Score = 41.5 bits (93), Expect = 0.020
Identities = 19/59 (32%), Positives = 39/59 (66%)
Frame = +2
Query: 290 TVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVG 466
T+ ++ ++ ++ L +L +G++ + + +KK I+ EQYNG++P + E+L KL G+G
Sbjct: 62 TIKDLAAVEEDRLMKLWEGLGYYN-RARNLKKAAIIVMEQYNGELPANREELKKLPGIG 119
>UniRef50_Q1ZXP7 Cluster: A/G-specific adenine DNA glycosylase; n=1;
Dictyostelium discoideum AX4|Rep: A/G-specific adenine
DNA glycosylase - Dictyostelium discoideum AX4
Length = 574
Score = 41.5 bits (93), Expect = 0.020
Identities = 20/78 (25%), Positives = 45/78 (57%)
Frame = +2
Query: 290 TVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGP 469
T++++ S + EE+ ++ +G+++ + K + + + + +N IP V+ L ++NG+GP
Sbjct: 160 TINDLASTTIEEVNKVWSGLGYYR-RAKNLWLGSKYVVDNFNSKIPSDVKSLLEINGIGP 218
Query: 470 KMAHICMKVAWNKSLESV 523
A +A+NK + V
Sbjct: 219 YTAGAISSIAFNKPVPLV 236
>UniRef50_Q1JU55 Cluster: A/G-specific adenine glycosylase; n=4;
Desulfovibrio|Rep: A/G-specific adenine glycosylase -
Desulfovibrio vulgaris
Length = 434
Score = 41.1 bits (92), Expect = 0.027
Identities = 21/77 (27%), Positives = 44/77 (57%)
Frame = +2
Query: 293 VDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGPK 472
V +V + S++EL + +G++ ++V+ + K L E++ G++PD E + L G+GP
Sbjct: 128 VASVAAASEDELLKAWEGLGYY-SRVRNLHKAAKALVERHGGELPDDPEAIRALPGIGPY 186
Query: 473 MAHICMKVAWNKSLESV 523
A +A+N+ + +
Sbjct: 187 TAGAIAGIAFNRDVTCI 203
>UniRef50_Q1J700 Cluster: Endonuclease III; n=11; Streptococcus
pyogenes|Rep: Endonuclease III - Streptococcus pyogenes
serotype M4 (strain MGAS10750)
Length = 218
Score = 41.1 bits (92), Expect = 0.027
Identities = 19/63 (30%), Positives = 35/63 (55%)
Frame = +2
Query: 347 VGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGPKMAHICMKVAWNKSLESVL 526
+G +K K K I KT +++ + G +P + ++L L GVG K A++ + + +V
Sbjct: 81 IGLYKNKAKNIIKTAQAIRDDFKGQVPKTHKELESLPGVGRKTANVVLAEVYGVPAIAVD 140
Query: 527 THM 535
TH+
Sbjct: 141 THV 143
Score = 40.7 bits (91), Expect = 0.035
Identities = 21/68 (30%), Positives = 32/68 (47%)
Frame = +1
Query: 508 VTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQP 687
V I VDTHV R+ R+ + P ++ L + +P + W + L+ FG+ C
Sbjct: 134 VPAIAVDTHVARVSKRLN-ISSPDADVKQIEADLMAKIPKKDWIITHHRLIFFGRYHCLA 192
Query: 688 IKPNCGEC 711
KP C C
Sbjct: 193 KKPKCEIC 200
>UniRef50_Q1EVT3 Cluster: A/G-specific adenine glycosylase MutY;
n=1; Clostridium oremlandii OhILAs|Rep: A/G-specific
adenine glycosylase MutY - Clostridium oremlandii OhILAs
Length = 544
Score = 41.1 bits (92), Expect = 0.027
Identities = 21/78 (26%), Positives = 44/78 (56%)
Frame = +2
Query: 290 TVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGP 469
T+D + +E + +L +G++ ++ + + KT I+ QY G+ P++ E+L KL G+G
Sbjct: 251 TIDALALADEERVLKLWEGLGYY-SRARNLHKTAKIIVAQYEGNFPETHEELLKLPGIGS 309
Query: 470 KMAHICMKVAWNKSLESV 523
A +++N + +V
Sbjct: 310 YTAGAIASISFNLPVAAV 327
>UniRef50_A6G2S7 Cluster: Putative endonuclease; n=1; Plesiocystis
pacifica SIR-1|Rep: Putative endonuclease - Plesiocystis
pacifica SIR-1
Length = 279
Score = 41.1 bits (92), Expect = 0.027
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = +1
Query: 508 VTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQP 687
V VDTH+HR+ R W T E T L+ P ++W++V+ + FG+ C
Sbjct: 133 VPAFPVDTHIHRLAAR--WGLSNGTTVERTEADLKRLFPEDRWNDVHLQFIFFGREYCPA 190
Query: 688 IKPNCGEC 711
+ +C
Sbjct: 191 LYHELADC 198
Score = 38.7 bits (86), Expect = 0.14
Identities = 21/67 (31%), Positives = 35/67 (52%)
Frame = +2
Query: 338 IYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGPKMAHICMKVAWNKSLE 517
I +G TK K +K L ++++G++P + L +L GVG K A + M A+
Sbjct: 77 IKTLGLAPTKAKRVKALAQQLVDEHDGEVPQDMAALERLPGVGHKTASVVMAQAFGVPAF 136
Query: 518 SVLTHMY 538
V TH++
Sbjct: 137 PVDTHIH 143
>UniRef50_Q9WYL3 Cluster: Repair endonuclease, putative; n=4;
Thermotogaceae|Rep: Repair endonuclease, putative -
Thermotoga maritima
Length = 232
Score = 40.7 bits (91), Expect = 0.035
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
Frame = +2
Query: 308 SMSDEELGQLIYPVGFWKTKVKYIKKTTGILKE-QYN----GDIPDSV--EKLCKLNGVG 466
S+ +E++ +LI P GF+ K K +K+ LKE YN D+P + E+L K+ G+G
Sbjct: 77 SLPEEKVAELIRPAGFFNIKTKRLKELLKFLKEYNYNLSRLRDLPTHILRERLLKIKGIG 136
Query: 467 PKMAHICMKVAWNK 508
+ A + A K
Sbjct: 137 KETADAILLYALEK 150
>UniRef50_A6GGY6 Cluster: Endonuclease III, putative; n=1;
Plesiocystis pacifica SIR-1|Rep: Endonuclease III,
putative - Plesiocystis pacifica SIR-1
Length = 270
Score = 40.7 bits (91), Expect = 0.035
Identities = 22/67 (32%), Positives = 35/67 (52%)
Frame = +1
Query: 511 TGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPI 690
+GI VDTHV+R+ R+G V K P + AL + W ++ L+ G+ +C+
Sbjct: 143 SGIVVDTHVNRVSARLGLVPAGKKPPVVEK-ALCKISSEDDWINLSHRLILHGRHLCKSK 201
Query: 691 KPNCGEC 711
P+C C
Sbjct: 202 APDCRRC 208
>UniRef50_Q89A45 Cluster: A/G-specific adenine glycosylase; n=4;
Buchnera aphidicola|Rep: A/G-specific adenine
glycosylase - Buchnera aphidicola subsp. Baizongia
pistaciae
Length = 351
Score = 40.7 bits (91), Expect = 0.035
Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Frame = +2
Query: 299 NVLSMSDEELGQLIY---PVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGP 469
N+ ++SD L ++ +G++ T+ + I KT ILK+++NG P+S ++ KL G+G
Sbjct: 61 NIDTLSDSPLDSILNLWSGLGYY-TRARNIYKTAKILKQKFNGIFPNSYAEIIKLPGIGK 119
Query: 470 KMAHICMKVAWN 505
A + +N
Sbjct: 120 STAGAILSFGFN 131
>UniRef50_UPI0000E87CC6 Cluster: A/G-specific adenine glycosylase;
n=1; Methylophilales bacterium HTCC2181|Rep:
A/G-specific adenine glycosylase - Methylophilales
bacterium HTCC2181
Length = 343
Score = 40.3 bits (90), Expect = 0.046
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +2
Query: 347 VGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGPKMA 478
+G+++ + K+I +T I+ +QY PDSVEKL L G+G A
Sbjct: 78 LGYYR-RAKFIMQTAKIIVQQYQSKFPDSVEKLLSLPGIGKSTA 120
>UniRef50_Q7NMV9 Cluster: Endonuclease III; n=1; Gloeobacter
violaceus|Rep: Endonuclease III - Gloeobacter violaceus
Length = 232
Score = 40.3 bits (90), Expect = 0.046
Identities = 24/72 (33%), Positives = 29/72 (40%)
Frame = +1
Query: 496 CLEQVTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQT 675
C V G+ VDTHV RI +G E L LP + W N L+V G+
Sbjct: 136 CHGIVEGVAVDTHVRRISKLLGLTDSTDAAKIERDL--MDCLPRDAWRSWNNLMVEHGRQ 193
Query: 676 ICQPIKPNCGEC 711
C P C C
Sbjct: 194 CCVAGAPRCTAC 205
>UniRef50_Q9SR66 Cluster: DEMETER-like protein 2; n=2; Arabidopsis
thaliana|Rep: DEMETER-like protein 2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 1309
Score = 40.3 bits (90), Expect = 0.046
Identities = 22/63 (34%), Positives = 34/63 (53%)
Frame = +1
Query: 523 VDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIKPNC 702
VDT+V RI R+GWV P+E ++ L + E++ ++ FG+ C +KPNC
Sbjct: 902 VDTNVGRIAVRLGWVPLQP-LPDELQMHLL------ELYELHYHMITFGKVFCTKVKPNC 954
Query: 703 GEC 711
C
Sbjct: 955 NAC 957
>UniRef50_Q9RRQ0 Cluster: Endonuclease III; n=2; Deinococcus|Rep:
Endonuclease III - Deinococcus radiodurans
Length = 259
Score = 39.9 bits (89), Expect = 0.061
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +1
Query: 523 VDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFE--QWSEVNPLLVGFGQTICQPIKP 696
VDTHVHR+ R+G + P + AL + LP + E++ + G+ +C +P
Sbjct: 165 VDTHVHRVSTRVGVI--PRMGEQAAHRALLALLPPDPPYLYELHINFLSHGRQVCTWTRP 222
Query: 697 NCGECL 714
CG+C+
Sbjct: 223 KCGKCI 228
>UniRef50_A4VZ25 Cluster: Uncharacterized protein related to
Endonuclease III; n=4; Streptococcus suis|Rep:
Uncharacterized protein related to Endonuclease III -
Streptococcus suis (strain 98HAH33)
Length = 227
Score = 39.9 bits (89), Expect = 0.061
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
Frame = +2
Query: 260 AMQRLRARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIP--DS 433
A+++L R LT+ ++L M E+L + I P GF+K K YI+ Q++GD D
Sbjct: 68 ALEQLEGR-LTIHSLLEMPVEDLQECIRPAGFFKQKSLYIRSVVE-WANQFDGDFSRLDR 125
Query: 434 VE------KLCKLNGVGPKMAHICMKVAWNKSL 514
VE +L L GVG + A + + +S+
Sbjct: 126 VETAVLRKELLSLKGVGNETADVILLYLCRRSV 158
>UniRef50_A0H0W7 Cluster: HhH-GPD; n=1; Chloroflexus aggregans DSM
9485|Rep: HhH-GPD - Chloroflexus aggregans DSM 9485
Length = 223
Score = 39.9 bits (89), Expect = 0.061
Identities = 20/83 (24%), Positives = 44/83 (53%)
Frame = +2
Query: 266 QRLRARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKL 445
+++ ++ T++ + + EL +++ P+G K + Y+ K + + +NG+IP E L
Sbjct: 57 EKIASKYPTIEALALADESELREVLRPLGLSK-RFPYLIKAARYICDNHNGEIPADFESL 115
Query: 446 CKLNGVGPKMAHICMKVAWNKSL 514
K+ G+G A + A+ + L
Sbjct: 116 LKVPGIGKYTATAILIFAYGQKL 138
>UniRef50_Q67VC2 Cluster: HhH-GPD base excision DNA repair
protein-related-like; n=4; Oryza sativa|Rep: HhH-GPD
base excision DNA repair protein-related-like - Oryza
sativa subsp. japonica (Rice)
Length = 277
Score = 39.5 bits (88), Expect = 0.081
Identities = 25/61 (40%), Positives = 32/61 (52%)
Frame = +1
Query: 523 VDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIKPNC 702
VDTHV RI N IGWV T + E L L S +P + ++N L V G+ +CQ
Sbjct: 194 VDTHVLRITNAIGWV-PATASRERAYLHLNSKIPDDLKFDLNCLFVTHGK-LCQSCSKKL 251
Query: 703 G 705
G
Sbjct: 252 G 252
>UniRef50_A6NQR4 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 355
Score = 39.1 bits (87), Expect = 0.11
Identities = 22/72 (30%), Positives = 40/72 (55%)
Frame = +2
Query: 308 SMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGPKMAHIC 487
++ D+ L +L +G++ ++ + +KK G + E+Y G IP S E+L L GVG A
Sbjct: 64 AVEDDTLMKLWQGLGYY-SRARNLKKAAGQVMERYGGAIPASYEELLTLAGVGEYTAGAI 122
Query: 488 MKVAWNKSLESV 523
+A+ + +V
Sbjct: 123 SSIAFGIPVPAV 134
>UniRef50_Q9TS62 Cluster: Pyrimidine HYDRATE-thymine glycol DNase/AP
lyase; n=2; Bos taurus|Rep: Pyrimidine HYDRATE-thymine
glycol DNase/AP lyase - Bos taurus (Bovine)
Length = 74
Score = 39.1 bits (87), Expect = 0.11
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +1
Query: 634 WSEVNPLLVGFGQTICQPIKP 696
WSE+N LLVGFGQ C PI+P
Sbjct: 54 WSEINGLLVGFGQQTCLPIRP 74
Score = 32.7 bits (71), Expect = 9.3
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = +2
Query: 287 LTVDNVLSMSDEELGQLIYPVGFWKT 364
LTVD++L D LG LI PVGF T
Sbjct: 16 LTVDSILQTDDSTLGALIVPVGFQGT 41
>UniRef50_A5BYI7 Cluster: Putative uncharacterized protein; n=1; Vitis
vinifera|Rep: Putative uncharacterized protein - Vitis
vinifera (Grape)
Length = 1824
Score = 38.7 bits (86), Expect = 0.14
Identities = 23/63 (36%), Positives = 32/63 (50%)
Frame = +1
Query: 523 VDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIKPNC 702
VDT+V RI R+GWV PE +L L + E++ ++ FG+ C KPNC
Sbjct: 1389 VDTNVGRIAVRLGWVPLQP-LPESLQLHLL------ELYELHYQMITFGKVFCTKSKPNC 1441
Query: 703 GEC 711
C
Sbjct: 1442 NAC 1444
>UniRef50_Q97IY7 Cluster: A/G-specific DNA glycosylase; n=1;
Clostridium acetobutylicum|Rep: A/G-specific DNA
glycosylase - Clostridium acetobutylicum
Length = 215
Score = 38.3 bits (85), Expect = 0.19
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Frame = +1
Query: 523 VDTHVHRICNRIGWVKKPTKTP-EETRLA--LQSWLPFEQWSEVNPLLVGFGQTICQPIK 693
+DT+V RI RI +K K P ++ +L Q +P +++ + N ++ FG IC
Sbjct: 141 LDTNVIRIFERIFDIKSEKKRPRDDIKLFEFAQLLIPEDRYVDYNYAILDFGACICTMYN 200
Query: 694 PNCGECL 714
P C +C+
Sbjct: 201 PKCSQCI 207
>UniRef50_Q9YFV0 Cluster: Endonuclease III; n=2;
Desulfurococcales|Rep: Endonuclease III - Aeropyrum
pernix
Length = 229
Score = 38.3 bits (85), Expect = 0.19
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = +1
Query: 523 VDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIKPNC 702
VDTH R+ R G V + E ++ AL ++ E + L++ G+T C+ +P C
Sbjct: 158 VDTHAARVARRWGLVGEKAGYDEISK-ALYNYFGPGNSEEAHRLIIALGRTYCKARRPRC 216
Query: 703 GEC 711
EC
Sbjct: 217 REC 219
>UniRef50_A3DPA2 Cluster: HhH-GPD family protein; n=2;
Thermoprotei|Rep: HhH-GPD family protein -
Staphylothermus marinus (strain ATCC 43588 / DSM 3639 /
F1)
Length = 228
Score = 38.3 bits (85), Expect = 0.19
Identities = 19/63 (30%), Positives = 35/63 (55%)
Frame = +1
Query: 523 VDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIKPNC 702
VDTH+ R+ R+G+++K +R ++ P ++ E + LL+ G+ C+ KP C
Sbjct: 154 VDTHIRRVSKRLGYIEK-DNYETISRWWMKQLKP-NEYLEAHLLLITHGRKTCKARKPLC 211
Query: 703 GEC 711
+C
Sbjct: 212 DKC 214
>UniRef50_Q1MS05 Cluster: A/G-specific DNA glycosylase; n=1;
Lawsonia intracellularis PHE/MN1-00|Rep: A/G-specific
DNA glycosylase - Lawsonia intracellularis (strain
PHE/MN1-00)
Length = 363
Score = 37.9 bits (84), Expect = 0.25
Identities = 17/77 (22%), Positives = 40/77 (51%)
Frame = +2
Query: 293 VDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGPK 472
+ +V +E+L +G+++ +V++++ ++ +YNG P+ E + +L G+GP
Sbjct: 59 IASVAYAPEEKLLSAWEGLGYYR-RVRHLQSAAQVIMHKYNGTFPERYEDILELPGIGPY 117
Query: 473 MAHICMKVAWNKSLESV 523
A A+N+ +
Sbjct: 118 TAGAIASTAFNQDFPCI 134
>UniRef50_Q6K6Q6 Cluster: Transcriptional activator-like; n=3; Oryza
sativa|Rep: Transcriptional activator-like - Oryza sativa
subsp. japonica (Rice)
Length = 1207
Score = 37.9 bits (84), Expect = 0.25
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 16/82 (19%)
Frame = +1
Query: 514 GIGVDTHVHRICNRIGWVK-KPTKTPEETRLA--------LQSWL-------PFEQWSEV 645
G VD +V RI R+GWVK +P E L +Q +L E+ E+
Sbjct: 784 GFPVDVNVARIVTRLGWVKLQPLPFSAEFHLVGLYPIMRDVQKYLWPRLCTISKEKLYEL 843
Query: 646 NPLLVGFGQTICQPIKPNCGEC 711
+ L++ FG+ IC + PNC C
Sbjct: 844 HCLMITFGKAICTKVSPNCRAC 865
>UniRef50_Q84EW6 Cluster: Putative endonuclease III; n=1;
Lactobacillus fermentum|Rep: Putative endonuclease III -
Lactobacillus fermentum
Length = 177
Score = 37.5 bits (83), Expect = 0.33
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Frame = +2
Query: 275 RARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNG----DIPDSVEK 442
+A D +L++S +E+ QLI P GF+ K Y++ ++ ++ P +K
Sbjct: 25 QATNFETDRILALSTDEMEQLIQPSGFFHNKAIYLRSMLTAYRDNFDDWSKLSTPLLRKK 84
Query: 443 LCKLNGVGPKMAHICM 490
L + GVG + A + +
Sbjct: 85 LIAMKGVGNETADVLL 100
>UniRef50_A4A299 Cluster: HhH-GPD protein; n=1; Blastopirellula
marina DSM 3645|Rep: HhH-GPD protein - Blastopirellula
marina DSM 3645
Length = 221
Score = 37.5 bits (83), Expect = 0.33
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Frame = +2
Query: 320 EELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIP-------DSV-EKLCKLNGVGPKM 475
EEL ++I P G+++ K K ++ + + ++GD+ DS+ E L LNG+GP+
Sbjct: 69 EELAEIIRPAGYYRLKAKRLQNLMRYVVDVHSGDLEAMFACSVDSLREDLLALNGIGPET 128
Query: 476 AHICMKVAWN 505
A + A N
Sbjct: 129 ADAILLYAGN 138
>UniRef50_Q5V120 Cluster: Endonuclease III; n=3;
Halobacteriaceae|Rep: Endonuclease III - Haloarcula
marismortui (Halobacterium marismortui)
Length = 278
Score = 37.5 bits (83), Expect = 0.33
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +1
Query: 523 VDTHVHRICNRIGWVKKPTKTPEET-RLALQSWLPFEQWSEVNPLLVGFGQTICQPIKPN 699
VDTHVHRI R+G P ET R L+ +P + + ++ FG+ C KP
Sbjct: 188 VDTHVHRIARRMGLA--PADADHETVRAYLERDVPAAKCGFGHTAIIQFGREYCSARKPA 245
Query: 700 C 702
C
Sbjct: 246 C 246
>UniRef50_Q9CH97 Cluster: A/G-specific adenine glycosylase; n=3;
Lactococcus lactis|Rep: A/G-specific adenine glycosylase
- Lactococcus lactis subsp. lactis (Streptococcus
lactis)
Length = 387
Score = 37.1 bits (82), Expect = 0.43
Identities = 18/71 (25%), Positives = 38/71 (53%)
Frame = +2
Query: 266 QRLRARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKL 445
+R + T++ + D EL +L +G++ ++ + +K + ++YNG PD++ +
Sbjct: 57 ERFMKKYPTIETLAQADDAELLKLWEGLGYY-SRARNLKIAAQEVVDKYNGKFPDNLADI 115
Query: 446 CKLNGVGPKMA 478
L G+GP A
Sbjct: 116 LSLKGIGPYTA 126
>UniRef50_Q2RI70 Cluster: HhH-GPD; n=1; Moorella thermoacetica ATCC
39073|Rep: HhH-GPD - Moorella thermoacetica (strain ATCC
39073)
Length = 257
Score = 37.1 bits (82), Expect = 0.43
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +2
Query: 260 AMQRLRARGLTVDNVLSMSD-EELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDI 424
A+ L+A GL ++ + EEL I P G+++ K K +K L+E+YNG +
Sbjct: 72 AIANLKAAGLLSPEAMARATIEELEPHIRPTGYYRVKAKKLKAFMNYLQERYNGSL 127
>UniRef50_A0LF51 Cluster: HhH-GPD family protein; n=1;
Syntrophobacter fumaroxidans MPOB|Rep: HhH-GPD family
protein - Syntrophobacter fumaroxidans (strain DSM 10017
/ MPOB)
Length = 222
Score = 37.1 bits (82), Expect = 0.43
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +1
Query: 523 VDTHVHRICNRIGWVKKPTKTPEETRLALQSWLP-FEQWSEVNPLLVGFGQTICQPIKPN 699
VDT+ HR+ +R GWV++ E + P + E++ LLV G C+ P
Sbjct: 148 VDTYTHRVFSRHGWVQESPSYDELRGFFMDCLEPDVGLFQELHALLVRTGHLFCRK-TPR 206
Query: 700 CGEC 711
CG C
Sbjct: 207 CGGC 210
>UniRef50_A4R3A5 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 375
Score = 37.1 bits (82), Expect = 0.43
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Frame = +1
Query: 523 VDTHVHRICNRIGWVKKPTKTP-EETRLALQSWLPFEQWSEVNPLLVGFGQTI--CQPIK 693
VDTHVHR+ +GW +P T EE L L + +P E ++ LL+ G+ C+
Sbjct: 281 VDTHVHRLTGMLGW--RPAGTSREEAHLHLDARIPDEDKYGLHVLLITHGKRCAECKAGG 338
Query: 694 PNCGEC 711
+ G+C
Sbjct: 339 KSSGKC 344
>UniRef50_Q0W1Z4 Cluster: Putative DNA glycosylase; n=1; uncultured
methanogenic archaeon RC-I|Rep: Putative DNA glycosylase
- Uncultured methanogenic archaeon RC-I
Length = 212
Score = 37.1 bits (82), Expect = 0.43
Identities = 25/96 (26%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Frame = +2
Query: 293 VDNVLSMSDEELGQLIYPVG-FWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGP 469
VD + E++ + P+G +W+ + K ++ ++G+IPD+ E L + GVG
Sbjct: 59 VDQLAEADIEDIKATLKPLGLYWRAN--HFKMAAEYIQRTFSGNIPDNKEDLKNIPGVGD 116
Query: 470 KMAHICMKVAWNKS---LESVLTHMYIG-YAIGLDG 565
A + VA+ K ++S + + Y +GL+G
Sbjct: 117 YAAGAILAVAFRKKSCIVDSNIARVLNRYYGLGLNG 152
>UniRef50_Q0W1A0 Cluster: Predicted endonuclease III; n=1;
uncultured methanogenic archaeon RC-I|Rep: Predicted
endonuclease III - Uncultured methanogenic archaeon RC-I
Length = 243
Score = 37.1 bits (82), Expect = 0.43
Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +1
Query: 517 IGVDTHVHRICNRIGWVKKPTKTP-EETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIK 693
I VDTHV RI R+G V P K E+ R L +P + L+ FG+ IC+
Sbjct: 144 IPVDTHVFRITKRLGIV--PEKADHEKARQILMEKVPEGLRGSTHVALIKFGREICKAQN 201
Query: 694 PNCGEC 711
P +C
Sbjct: 202 PRHDQC 207
Score = 33.9 bits (74), Expect = 4.0
Identities = 23/91 (25%), Positives = 44/91 (48%), Gaps = 8/91 (8%)
Frame = +2
Query: 290 TVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDI-------PDSVEK-L 445
T + + S + + LI G + K K IK + ++ ++Y+G + P+ K L
Sbjct: 61 TPEQLASAPESAIADLIRIGGLHEQKAKLIKNISQLVIDEYDGTLDFVCETDPEVARKEL 120
Query: 446 CKLNGVGPKMAHICMKVAWNKSLESVLTHMY 538
+ GVGPK A + + ++ + V TH++
Sbjct: 121 LTIKGVGPKTADCVLLFSCDRDVIPVDTHVF 151
>UniRef50_Q9A623 Cluster: Endonuclease III family protein; n=2;
Caulobacter|Rep: Endonuclease III family protein -
Caulobacter crescentus (Caulobacter vibrioides)
Length = 241
Score = 36.7 bits (81), Expect = 0.57
Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = +1
Query: 523 VDTHVHRICNRIGWV-KKPTKTPEETRLAL--QSWLPFEQWSEVNPLLV-GFGQTICQPI 690
VDTHV R+ RIG V T T +A+ SW + E++ L+ G GQ +C
Sbjct: 152 VDTHVDRVARRIGLVGSGDTTNTYHTLMAMAPASWTA-DDLFELHWLMKRGLGQMLCGAE 210
Query: 691 KPNCGEC 711
P CG C
Sbjct: 211 APKCGAC 217
>UniRef50_Q67NN1 Cluster: A/G-specific adenine glycosylase; n=1;
Symbiobacterium thermophilum|Rep: A/G-specific adenine
glycosylase - Symbiobacterium thermophilum
Length = 365
Score = 36.7 bits (81), Expect = 0.57
Identities = 18/86 (20%), Positives = 45/86 (52%)
Frame = +2
Query: 266 QRLRARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKL 445
+R AR T++ + +E++ + +G++ ++ + + + +Y G +PD + +
Sbjct: 47 ERWMARFPTLEALADAPEEQVLKAWEGLGYY-SRARNLHAAAREVVARYGGTVPDDPDAV 105
Query: 446 CKLNGVGPKMAHICMKVAWNKSLESV 523
L G+GP A + +A+N+ + +V
Sbjct: 106 ASLKGIGPYTAGAILSIAFNRPVPAV 131
>UniRef50_Q6UQ60 Cluster: TspRI; n=1; Thermus sp. R|Rep: TspRI -
Thermus sp. R
Length = 225
Score = 36.7 bits (81), Expect = 0.57
Identities = 28/85 (32%), Positives = 39/85 (45%), Gaps = 5/85 (5%)
Frame = +1
Query: 472 NGTYLYEGCLEQVTGIGVDTHVHRICNRI-GWVKKPTKTPEETRLAL-QSWLPFEQWSEV 645
N +Y C +V VD +V R+ +R+ G++ K EE AL Q + EV
Sbjct: 130 NAVLIYSTCARKVA---VDVNVARVVSRVFGFILVNGKDREENLWALAQRLVECTSGCEV 186
Query: 646 NPL---LVGFGQTICQPIKPNCGEC 711
L L+ G+ IC P KP C C
Sbjct: 187 RSLNWALLDVGREICHPTKPRCPLC 211
Score = 32.7 bits (71), Expect = 9.3
Identities = 17/60 (28%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +2
Query: 305 LSMSDE-ELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGPKMAH 481
L+ +DE EL Q++ P+GF + + +K+ + ++ G++P EK+ L G +A+
Sbjct: 71 LARADEAELEQMLRPLGFQRVRASALKRAAEEVCTRWGGNLPLEEEKIASLPRSGRYVAN 130
>UniRef50_Q6K6R4 Cluster: Putative transcriptional activator DEMETER;
n=1; Oryza sativa (japonica cultivar-group)|Rep: Putative
transcriptional activator DEMETER - Oryza sativa subsp.
japonica (Rice)
Length = 1552
Score = 36.7 bits (81), Expect = 0.57
Identities = 26/80 (32%), Positives = 35/80 (43%), Gaps = 17/80 (21%)
Frame = +1
Query: 523 VDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQ------WS-----------EVNP 651
VDT+V RIC R+GWV PE +L L P + W E++
Sbjct: 1283 VDTNVARICVRLGWVPL-QPLPESLQLHLLELYPLLEHIQKYIWPRLCKLDQLILYELHY 1341
Query: 652 LLVGFGQTICQPIKPNCGEC 711
++ FG+ C KPNC C
Sbjct: 1342 QMITFGKVFCSKSKPNCNSC 1361
>UniRef50_Q0E138 Cluster: Os02g0494700 protein; n=3; Oryza sativa|Rep:
Os02g0494700 protein - Oryza sativa subsp. japonica
(Rice)
Length = 1648
Score = 36.7 bits (81), Expect = 0.57
Identities = 26/80 (32%), Positives = 35/80 (43%), Gaps = 17/80 (21%)
Frame = +1
Query: 523 VDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQ------WS-----------EVNP 651
VDT+V RIC R+GWV PE +L L P + W E++
Sbjct: 1307 VDTNVARICVRLGWVPL-QPLPESLQLHLLELYPLLEHIQKYIWPRLCKLDQLILYELHY 1365
Query: 652 LLVGFGQTICQPIKPNCGEC 711
++ FG+ C KPNC C
Sbjct: 1366 QMITFGKVFCSKSKPNCNSC 1385
>UniRef50_Q2LY55 Cluster: A/g-specific DNA glycosylase; n=1;
Syntrophus aciditrophicus SB|Rep: A/g-specific DNA
glycosylase - Syntrophus aciditrophicus (strain SB)
Length = 373
Score = 36.3 bits (80), Expect = 0.76
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = +1
Query: 523 VDTHVHRICNRIGWVKKPTKTPEETRL--AL-QSWLPFEQWSEVNPLLVGFGQTICQPIK 693
VD +V R+ +R+ +V P RL AL + +P Q N L+ G +C+P
Sbjct: 155 VDGNVKRVLSRLFFVDSPVDLTSTRRLLSALAEKLVPARQPGRFNQALMELGAVLCRPKT 214
Query: 694 PNCGEC 711
P C +C
Sbjct: 215 PLCSDC 220
>UniRef50_O31584 Cluster: YfhQ protein; n=18; Bacillaceae|Rep: YfhQ
protein - Bacillus subtilis
Length = 369
Score = 36.3 bits (80), Expect = 0.76
Identities = 18/78 (23%), Positives = 42/78 (53%)
Frame = +2
Query: 290 TVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGP 469
TV+ + +E++ + +G++ ++V+ ++ +K++Y G +P + L GVGP
Sbjct: 70 TVEALADADEEKVLKAWEGLGYY-SRVRNLQSAVKEVKQEYGGIVPPDEKDFGGLKGVGP 128
Query: 470 KMAHICMKVAWNKSLESV 523
+ +A+NK + +V
Sbjct: 129 YTKGAVLSIAYNKPIPAV 146
>UniRef50_Q0JPK6 Cluster: Os01g0217900 protein; n=3; Oryza sativa|Rep:
Os01g0217900 protein - Oryza sativa subsp. japonica
(Rice)
Length = 1927
Score = 36.3 bits (80), Expect = 0.76
Identities = 26/80 (32%), Positives = 35/80 (43%), Gaps = 17/80 (21%)
Frame = +1
Query: 523 VDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQ------WS-----------EVNP 651
VDT+V RIC R+GWV PE +L L P + W E++
Sbjct: 1514 VDTNVGRICVRLGWVPL-QPLPESLQLHLLEMYPMLENIQKYLWPRLCKLDQRTLYELHY 1572
Query: 652 LLVGFGQTICQPIKPNCGEC 711
++ FG+ C KPNC C
Sbjct: 1573 QMITFGKVFCTKSKPNCNAC 1592
>UniRef50_Q978W9 Cluster: Endonuclease III; n=3; Thermoplasma|Rep:
Endonuclease III - Thermoplasma volcanium
Length = 244
Score = 36.3 bits (80), Expect = 0.76
Identities = 20/75 (26%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Frame = +2
Query: 260 AMQRLRARGLT-VDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNG-----D 421
A+ L++ G+T +++V + E+ +LI GF+ K + +K + ++ ++NG D
Sbjct: 64 AIANLKSHGITKLEDVCKIEKNEIAKLIRSSGFYNQKAERLKAVSCLIVGEFNGIDRIKD 123
Query: 422 IPDSVEKLCKLNGVG 466
I E+L + G+G
Sbjct: 124 IDAFAERLKSIKGIG 138
>UniRef50_Q4J8R2 Cluster: Endonuclease III; n=1; Sulfolobus
acidocaldarius|Rep: Endonuclease III - Sulfolobus
acidocaldarius
Length = 223
Score = 36.3 bits (80), Expect = 0.76
Identities = 16/64 (25%), Positives = 34/64 (53%)
Frame = +1
Query: 523 VDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIKPNC 702
+DTH+ R+ +R+G++ K + + ++ E ++ LL+ G+ C+ KP C
Sbjct: 147 IDTHIRRVISRLGFLGSSPKYKDISEY-FKTRFSSEDLLNLHHLLIAHGRKTCKSRKPIC 205
Query: 703 GECL 714
+C+
Sbjct: 206 DKCV 209
>UniRef50_UPI0000D56982 Cluster: PREDICTED: similar to radial
spokehead-like 3; n=1; Tribolium castaneum|Rep:
PREDICTED: similar to radial spokehead-like 3 -
Tribolium castaneum
Length = 579
Score = 35.9 bits (79), Expect = 1.00
Identities = 15/41 (36%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Frame = +1
Query: 511 TGIGVDTHVHRICNRIG--WVKKPTKTPEETRLALQSWLPF 627
+G+G + +V+ +C+ IG WV+ P TP++ R+A Q + F
Sbjct: 265 SGVGANKNVYYVCSEIGEPWVQLPDVTPKQIRVARQIYKTF 305
>UniRef50_Q8CV61 Cluster: A/G-specific adenine glycosylase; n=1;
Oceanobacillus iheyensis|Rep: A/G-specific adenine
glycosylase - Oceanobacillus iheyensis
Length = 354
Score = 35.9 bits (79), Expect = 1.00
Identities = 16/78 (20%), Positives = 45/78 (57%)
Frame = +2
Query: 290 TVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGP 469
TV ++ ++++ + +G++ ++ + ++ + + YNG+IP++ ++L L G+GP
Sbjct: 67 TVYDLAKADEQDVLKSWEGLGYY-SRARNLQTAVREVVDTYNGEIPNNEKELASLKGIGP 125
Query: 470 KMAHICMKVAWNKSLESV 523
+ +A+N+ + +V
Sbjct: 126 YTKGAILSIAFNQPVPAV 143
>UniRef50_Q2AG48 Cluster: HhH-GPD; n=2; Clostridia|Rep: HhH-GPD -
Halothermothrix orenii H 168
Length = 224
Score = 35.9 bits (79), Expect = 1.00
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 8/69 (11%)
Frame = +2
Query: 296 DNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSV--------EKLCK 451
+ +L + +E L ++I P G++ K + IK L E Y G + + +KL +
Sbjct: 73 EELLHLEEEILAKMIKPAGYYNMKARKIKAFINFLFEDYGGSLDEMFQEPLSKIRDKLLE 132
Query: 452 LNGVGPKMA 478
+ G+GP+ A
Sbjct: 133 VYGIGPETA 141
Score = 33.1 bits (72), Expect = 7.0
Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +1
Query: 523 VDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQ--WSEVNPLLVGFGQTICQPIKP 696
+D + RI +RIG++++ ++ + + LP ++E + LLV G+ IC+ P
Sbjct: 156 IDAYTKRIFSRIGYIEENIGYHTLQKMIMDN-LPARTGIYNEYHALLVALGKEICKKNNP 214
Query: 697 NCGEC 711
C +C
Sbjct: 215 LCEKC 219
>UniRef50_A7DHR9 Cluster: A/G-specific adenine glycosylase; n=2;
Methylobacterium extorquens PA1|Rep: A/G-specific
adenine glycosylase - Methylobacterium extorquens PA1
Length = 441
Score = 35.9 bits (79), Expect = 1.00
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +1
Query: 523 VDTHVHRICNRIGWVKKPTKTPE-ETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIKPN 699
VD +V R+ +R+ ++ P + RL Q+ +P + + L+ G T+C P +P
Sbjct: 174 VDGNVERVMSRLHAIETPLPAARAQIRLFTQALVPERRPGDFAQALMDLGATLCTPKRPA 233
Query: 700 CGEC 711
C C
Sbjct: 234 CALC 237
>UniRef50_A6PBP1 Cluster: HhH-GPD family protein; n=1; Shewanella
sediminis HAW-EB3|Rep: HhH-GPD family protein -
Shewanella sediminis HAW-EB3
Length = 243
Score = 35.9 bits (79), Expect = 1.00
Identities = 20/66 (30%), Positives = 35/66 (53%)
Frame = +2
Query: 281 RGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNG 460
+ LT + +L++ + Q I P G++ K +YI++ + NG +P S E L G
Sbjct: 87 KALTPEAILALDYDNFKQAIRPAGYYNQKSRYIREFIPFFL-KLNGGVP-SREGLLSCVG 144
Query: 461 VGPKMA 478
+GP+ A
Sbjct: 145 IGPETA 150
>UniRef50_Q6L1H4 Cluster: Endonuclease III; n=1; Picrophilus
torridus|Rep: Endonuclease III - Picrophilus torridus
Length = 215
Score = 35.9 bits (79), Expect = 1.00
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 7/89 (7%)
Frame = +2
Query: 260 AMQRLRARG-LTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNG------ 418
A++ L++ G LT+D ++ M ++L I GF+ K KYIK +K Y
Sbjct: 46 AIESLKSSGQLTIDWIIKMDCKDLALKIRSAGFYNQKAKYIKNACISIKAIYGNLDNMKK 105
Query: 419 DIPDSVEKLCKLNGVGPKMAHICMKVAWN 505
+ + + L L G+GP+ + A N
Sbjct: 106 NFNEVYDFLSGLKGIGPETRDSILLYALN 134
>UniRef50_P95945 Cluster: Endonuclease III; n=1; Sulfolobus
solfataricus|Rep: Endonuclease III - Sulfolobus
solfataricus
Length = 236
Score = 35.9 bits (79), Expect = 1.00
Identities = 20/78 (25%), Positives = 43/78 (55%), Gaps = 6/78 (7%)
Frame = +2
Query: 275 RARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNG------DIPDSV 436
R G+T + + + + ++ + G ++TK K +K+ + I+ E+YNG + ++
Sbjct: 62 RKVGVTPEKLSNANLADIESALKISGLYRTKAKRLKEISRIILERYNGLIDSLLNTSNAR 121
Query: 437 EKLCKLNGVGPKMAHICM 490
++L KL G+G K A + +
Sbjct: 122 DELLKLEGIGEKTADVVL 139
>UniRef50_P46044 Cluster: FeMo cofactor biosynthesis protein nifB;
n=53; Bacteria|Rep: FeMo cofactor biosynthesis protein
nifB - Frankia alni
Length = 510
Score = 35.9 bits (79), Expect = 1.00
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Frame = +2
Query: 275 RARGLTVDNV---LSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEK- 442
R L VD+V ++M D E+G+ IYP W+ K ++ + IL EQ + E+
Sbjct: 169 RIADLNVDHVTITINMIDPEVGERIYPWVAWRGKRYTGREASKILSEQQLAGLAALTERK 228
Query: 443 -LCKLNGV 463
LCK+N V
Sbjct: 229 ILCKVNSV 236
>UniRef50_Q92CE3 Cluster: Lin1229 protein; n=12; Listeria|Rep:
Lin1229 protein - Listeria innocua
Length = 379
Score = 35.5 bits (78), Expect = 1.3
Identities = 20/65 (30%), Positives = 28/65 (43%)
Frame = -3
Query: 689 IG*HIVWPNPTSRGLTSLHCSKGNQLCRARRVSSGVLVGFLTHPILLHILCTCVSTPIPV 510
IG H+VW T L +KG+Q + +G + PI LH + C P+P
Sbjct: 285 IGGHVVWAAITGAALV---IAKGDQKLGMNHIFTGTFWKWFIIPIALHFVWDCPFNPLPA 341
Query: 509 TCSKQ 495
KQ
Sbjct: 342 IAFKQ 346
>UniRef50_Q88SQ0 Cluster: A/G-specific adenine glycosylase; n=2;
Lactobacillus|Rep: A/G-specific adenine glycosylase -
Lactobacillus plantarum
Length = 366
Score = 35.5 bits (78), Expect = 1.3
Identities = 22/91 (24%), Positives = 48/91 (52%)
Frame = +2
Query: 266 QRLRARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKL 445
QR A TV ++ + + +L + +G++ ++V+ +++ L Y+G P + +L
Sbjct: 58 QRFMALFPTVADLAAAPESQLLKAWEGLGYY-SRVRNMQRCAKQLLTDYDGQWPQTAAEL 116
Query: 446 CKLNGVGPKMAHICMKVAWNKSLESVLTHMY 538
+L G+GP A +A+N+ + +V + Y
Sbjct: 117 TELIGIGPYTAGAIASIAFNEPVPAVDGNAY 147
>UniRef50_Q830R8 Cluster: A/G-specific adenine glycosylase; n=46;
Lactobacillales|Rep: A/G-specific adenine glycosylase -
Enterococcus faecalis (Streptococcus faecalis)
Length = 394
Score = 35.5 bits (78), Expect = 1.3
Identities = 16/72 (22%), Positives = 39/72 (54%)
Frame = +2
Query: 290 TVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGP 469
T+ ++ D++L + +G++ ++ + +K + ++ G +PD++E + L G+GP
Sbjct: 72 TIQDLAEAPDDKLLKAWEGLGYY-SRARNLKVAAQQIVSEFGGKMPDTIEDIRSLKGIGP 130
Query: 470 KMAHICMKVAWN 505
A +A+N
Sbjct: 131 YTAGAIGSIAFN 142
>UniRef50_Q4ZLP4 Cluster: A/G-specific adenine glycosylase MutY;
n=3; Pseudomonas syringae group|Rep: A/G-specific
adenine glycosylase MutY - Pseudomonas syringae pv.
syringae (strain B728a)
Length = 355
Score = 35.5 bits (78), Expect = 1.3
Identities = 18/59 (30%), Positives = 34/59 (57%)
Frame = +2
Query: 290 TVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVG 466
TV + ++E+ L +G++ T+ + ++KT I+ ++ G+ P VEKL L G+G
Sbjct: 61 TVQALAEAPEDEVLHLWTGLGYY-TRARNLQKTAKIVVAEHGGEFPRDVEKLILLPGIG 118
>UniRef50_Q1K3W8 Cluster: A/G-specific adenine glycosylase; n=2;
Desulfuromonadales|Rep: A/G-specific adenine glycosylase
- Desulfuromonas acetoxidans DSM 684
Length = 358
Score = 35.5 bits (78), Expect = 1.3
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Frame = +1
Query: 514 GIGVDTHVHR-ICNRIGWVKKPTKTPEETRLA--LQSWLPFEQWSEVNPLLVGFGQTICQ 684
G+ +D +V R +C W P + E +L P + + ++ FG T+C
Sbjct: 137 GVILDGNVRRGLCRLFAWQDDPRSSAAEKQLWQWAAQLTPQQHCHDYAQAIMDFGATLCT 196
Query: 685 PIKPNCGEC 711
P +PNC C
Sbjct: 197 PRQPNCVAC 205
>UniRef50_A1IEQ4 Cluster: A/G-specific adenine glycosylase; n=1;
Candidatus Desulfococcus oleovorans Hxd3|Rep:
A/G-specific adenine glycosylase - Candidatus
Desulfococcus oleovorans Hxd3
Length = 360
Score = 35.5 bits (78), Expect = 1.3
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = +1
Query: 523 VDTHVHRICNRIGWVKKPTKTPEETRLALQS---WLPFEQWSEVNPLLVGFGQTICQPIK 693
VD +V R+ R+ + +P P R+ L+ L F+ N ++ G +C+P +
Sbjct: 139 VDGNVKRVLARLFLLDEPVNRPSNHRVFLEKARLLLAFKDPGTFNQAMMELGALVCKPGR 198
Query: 694 PNCGEC 711
P C +C
Sbjct: 199 PLCDQC 204
>UniRef50_A2DVT5 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 122
Score = 35.5 bits (78), Expect = 1.3
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +2
Query: 284 GLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIP 427
GL+ +N+L + + I V F K K + IK + + E+Y+GDIP
Sbjct: 72 GLSCENMLKTDKSVIEECITKVSFRKRKAQNIKDISKTMLEKYDGDIP 119
>UniRef50_Q5V6M5 Cluster: Endonuclease III; n=3;
Halobacteriaceae|Rep: Endonuclease III - Haloarcula
marismortui (Halobacterium marismortui)
Length = 233
Score = 35.5 bits (78), Expect = 1.3
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +1
Query: 517 IGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIKP 696
+ VDTHV R+ R G V + + T + L + +P E ++ LL+ G+ C P
Sbjct: 159 MAVDTHVERVSKRFGLVTE-SATNKRAHDELDAIIPDELTYPLHVLLITHGREFCSARSP 217
Query: 697 NC 702
+C
Sbjct: 218 DC 219
>UniRef50_A1RTM9 Cluster: HhH-GPD family protein; n=3;
Pyrobaculum|Rep: HhH-GPD family protein - Pyrobaculum
islandicum (strain DSM 4184 / JCM 9189)
Length = 222
Score = 35.5 bits (78), Expect = 1.3
Identities = 22/63 (34%), Positives = 33/63 (52%)
Frame = +1
Query: 523 VDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIKPNC 702
VDTH+ RI R G K E +R ++ LP ++ E++ L+ FG+ IC+ P C
Sbjct: 146 VDTHITRIARRWGIGKS---YDEISRWFIER-LPQHKYLELHLKLIQFGREICKARNPKC 201
Query: 703 GEC 711
C
Sbjct: 202 DVC 204
>UniRef50_Q8F3S2 Cluster: A/G-specific DNA glycosylase; n=4;
Leptospira|Rep: A/G-specific DNA glycosylase -
Leptospira interrogans
Length = 375
Score = 35.1 bits (77), Expect = 1.7
Identities = 18/65 (27%), Positives = 36/65 (55%)
Frame = +2
Query: 314 SDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGPKMAHICMK 493
S+EE+ + +G++ ++ K +KK +L E+Y P++ E+ + GVG A +
Sbjct: 78 SEEEVMKYWKGLGYY-SRAKNLKKGARLLVEKYQSRFPENYEEALLIPGVGSYTASAVLS 136
Query: 494 VAWNK 508
+A+ K
Sbjct: 137 IAYGK 141
>UniRef50_Q5HN66 Cluster: A/G-specific adenine glycosylase; n=16;
Staphylococcus|Rep: A/G-specific adenine glycosylase -
Staphylococcus epidermidis (strain ATCC 35984 / RP62A)
Length = 347
Score = 35.1 bits (77), Expect = 1.7
Identities = 18/78 (23%), Positives = 39/78 (50%)
Frame = +2
Query: 290 TVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGP 469
T+ ++ +++E+ + +G++ ++ + + Y+G++P E KL GVGP
Sbjct: 61 TIQSLSEANEDEVLKYWEGLGYY-SRARNFHTAVKEVNNNYDGEVPYDPESFKKLKGVGP 119
Query: 470 KMAHICMKVAWNKSLESV 523
M +A+N L +V
Sbjct: 120 YTQAAVMSIAFNHPLATV 137
>UniRef50_A6PM32 Cluster: A/G-specific adenine glycosylase; n=10;
Bacteria|Rep: A/G-specific adenine glycosylase -
Victivallis vadensis ATCC BAA-548
Length = 356
Score = 35.1 bits (77), Expect = 1.7
Identities = 17/65 (26%), Positives = 36/65 (55%)
Frame = +2
Query: 314 SDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGPKMAHICMK 493
S+ +L +L +G++ +V+ ++K ++ +Y G+ P VE L L G+G A
Sbjct: 71 SEPQLLKLWEGLGYYN-RVRNLQKAARVIVSEYGGEFPRDVETLRSLPGIGEYTAGAIAS 129
Query: 494 VAWNK 508
+++N+
Sbjct: 130 ISFNR 134
>UniRef50_Q9P9L6 Cluster: U/G and T/G mismatch-specific DNA
glycosylase; n=2; Thermoprotei|Rep: U/G and T/G
mismatch-specific DNA glycosylase - Pyrobaculum
aerophilum
Length = 230
Score = 35.1 bits (77), Expect = 1.7
Identities = 21/65 (32%), Positives = 31/65 (47%)
Frame = +2
Query: 314 SDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGPKMAHICMK 493
S EE+ +I P+G + +KK + L ++NG IP + L L GVG A +
Sbjct: 78 SVEEIKAIIQPLGMEHVRATLLKKLSEELVRRFNGQIPCDRDALKSLPGVGDYAASEVLL 137
Query: 494 VAWNK 508
A K
Sbjct: 138 TACGK 142
>UniRef50_A3MV22 Cluster: Iron-sulfur cluster loop containing
protein; n=4; Pyrobaculum|Rep: Iron-sulfur cluster loop
containing protein - Pyrobaculum calidifontis (strain
JCM 11548 / VA1)
Length = 298
Score = 35.1 bits (77), Expect = 1.7
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 17/82 (20%)
Frame = +1
Query: 517 IGVDTHVHRICNRIGWVKKP---------TKTPEETRL---ALQSWLPFEQWSEVNPL-- 654
+ VD H+ RI R+G V+ T E+ RL +W ++++++P
Sbjct: 191 VPVDNHLSRISYRLGIVEVDYDFLESGVETNREEDIRLRETVKTAWRIVAKFADLHPFAL 250
Query: 655 ---LVGFGQTICQPIKPNCGEC 711
L FG+TIC +PNCG+C
Sbjct: 251 DDFLWNFGRTICTRERPNCGQC 272
>UniRef50_A3ZT46 Cluster: A/G-specific adenine glycosylase; n=1;
Blastopirellula marina DSM 3645|Rep: A/G-specific
adenine glycosylase - Blastopirellula marina DSM 3645
Length = 358
Score = 34.7 bits (76), Expect = 2.3
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = +1
Query: 556 IGWVKKPTKTPEETRL--ALQSWLPFEQWSEVNPLLVGFGQTICQPIKPNCGEC 711
+ + + PTKT + L + LP E S N L+ G IC P P CG C
Sbjct: 152 LAYREDPTKTAGQRLLWQFAEHILPTEDVSSFNQALMELGSEICTPRNPQCGVC 205
>UniRef50_Q6JJ31 Cluster: Putative endonuclease III protein; n=1;
Ipomoea trifida|Rep: Putative endonuclease III protein -
Ipomoea trifida (Morning glory)
Length = 1687
Score = 34.7 bits (76), Expect = 2.3
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +1
Query: 523 VDTHVHRICNRIGWVK-KPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIKPN 699
VDT++ RI R+GWV +P + L Q L ++ L+ FG+ IC PN
Sbjct: 1225 VDTNIARIVVRLGWVPLEPLPGDLQIHLLDQYVLHYQ--------LITFGKVICTKKNPN 1276
Query: 700 CGEC 711
C C
Sbjct: 1277 CNAC 1280
>UniRef50_Q58829 Cluster: Putative endonuclease MJ1434; n=4;
cellular organisms|Rep: Putative endonuclease MJ1434 -
Methanococcus jannaschii
Length = 220
Score = 34.7 bits (76), Expect = 2.3
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 10/103 (9%)
Frame = +2
Query: 260 AMQRLRARGLTVD-NVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQY-NGDIPDS 433
A+ L+ L + +L++ +++L +LI P GF+ K K +K T + E Y N +
Sbjct: 52 AINNLKMEDLLEEVKILNVDEDKLKELIRPAGFYNLKAKRLKNVTKFIVENYGNTEEMAK 111
Query: 434 VEK--------LCKLNGVGPKMAHICMKVAWNKSLESVLTHMY 538
+K L +NGVG + A + A ++ ES + Y
Sbjct: 112 TDKDTLILRAELLSINGVGKETADSILLYALDR--ESFVVDAY 152
>UniRef50_Q9KEC2 Cluster: Adenine glycosylase; n=6; Bacillaceae|Rep:
Adenine glycosylase - Bacillus halodurans
Length = 372
Score = 34.3 bits (75), Expect = 3.0
Identities = 14/73 (19%), Positives = 42/73 (57%)
Frame = +2
Query: 290 TVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGP 469
T++ + ++++ + +G++ ++ + ++ + E Y G++P + +++ KL GVGP
Sbjct: 67 TLETLAYAEEDQVLKAWEGLGYY-SRARNLQSAVREVVESYGGEVPSTRKEISKLKGVGP 125
Query: 470 KMAHICMKVAWNK 508
A + +A+++
Sbjct: 126 YTAGAILSIAYDQ 138
>UniRef50_A7CQ19 Cluster: Helix-hairpin-helix motif; n=1;
Opitutaceae bacterium TAV2|Rep: Helix-hairpin-helix
motif - Opitutaceae bacterium TAV2
Length = 160
Score = 34.3 bits (75), Expect = 3.0
Identities = 17/48 (35%), Positives = 29/48 (60%)
Frame = +2
Query: 395 ILKEQYNGDIPDSVEKLCKLNGVGPKMAHICMKVAWNKSLESVLTHMY 538
+L E+++G +P + E+L +L GVG K A + M A+ V TH++
Sbjct: 39 LLLEKHHGQVPRTFEELEELPGVGHKTASVVMSQAFGYPAFPVDTHIH 86
>UniRef50_Q4D017 Cluster: A/G-specific adenine glycosylase,
putative; n=2; Trypanosoma|Rep: A/G-specific adenine
glycosylase, putative - Trypanosoma cruzi
Length = 451
Score = 34.3 bits (75), Expect = 3.0
Identities = 18/78 (23%), Positives = 40/78 (51%)
Frame = +2
Query: 290 TVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGP 469
TV + S+E + +G+++ + Y+KK + + +NG +P + +L ++ G+GP
Sbjct: 80 TVAVLAEASEESVKTAWSGLGYYR-RALYLKKGAEYVMKHFNGKLPVTAVELQQIPGIGP 138
Query: 470 KMAHICMKVAWNKSLESV 523
A + + + + SV
Sbjct: 139 YTAAAISSICFGEKVASV 156
>UniRef50_Q5SH32 Cluster: A/G-specific adenine glycosylase; n=2;
Thermus thermophilus|Rep: A/G-specific adenine
glycosylase - Thermus thermophilus (strain HB8 / ATCC
27634 / DSM 579)
Length = 325
Score = 33.9 bits (74), Expect = 4.0
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +1
Query: 523 VDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEV-NPLLVGFGQTICQPIKPN 699
VD +V R+ +R+ + ++ K E LA Q LP V N L+ G T+C P +P
Sbjct: 129 VDGNVRRVLSRL-FARESPKEKELFALA-QGLLPEGVDPGVWNQALMELGATVCLPKRPR 186
Query: 700 CGEC 711
CG C
Sbjct: 187 CGAC 190
>UniRef50_A7BA81 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 278
Score = 33.9 bits (74), Expect = 4.0
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 8/87 (9%)
Frame = +1
Query: 475 GTYLYEGCLEQVTGIGV---DTHVHRICNRI--GWVKKPTKTPEETR-LALQSWLPFE-- 630
GTY L GI V DT+V R+ R G P TP + + + LP +
Sbjct: 96 GTYTASALLAFRHGIRVPVLDTNVRRVLVRFLDGREFPPHTTPSKAETMRADAILPEDGH 155
Query: 631 QWSEVNPLLVGFGQTICQPIKPNCGEC 711
+EV+ L+ FG +C + P+C EC
Sbjct: 156 HAAEVSLSLMEFGALVCTQLNPSCDEC 182
>UniRef50_A5P905 Cluster: Endonuclease III family protein; n=3;
Erythrobacter|Rep: Endonuclease III family protein -
Erythrobacter sp. SD-21
Length = 239
Score = 33.9 bits (74), Expect = 4.0
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Frame = +1
Query: 517 IGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFE----QWSEVNPLLVGFGQTICQ 684
I +D H RI R+G V P + + + +P E + E + L+ GQT C+
Sbjct: 156 IVLDGHHTRILQRMGLVP-PKASTDRAFEVIMPVMPKEWHGADFDEHHLLMKKLGQTTCR 214
Query: 685 PIKPNCGECL 714
P P+C CL
Sbjct: 215 PAAPDCAACL 224
>UniRef50_A1WUK4 Cluster: HhH-GPD family protein; n=1;
Halorhodospira halophila SL1|Rep: HhH-GPD family protein
- Halorhodospira halophila (strain DSM 244 / SL1)
(Ectothiorhodospirahalophila (strain DSM 244 / SL1))
Length = 234
Score = 31.5 bits (68), Expect(2) = 4.9
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +1
Query: 523 VDTHVHRICNRIGWVKKPTKTPEETRLALQSWL--PFEQWSEVNPLLVGFGQTICQPIKP 696
VD + RI R+GW+ + + E R +++ L ++E++ +V G+ C+P P
Sbjct: 154 VDAYTRRILQRLGWI-QGDEGYERLRGGVEAALGPNTAAFNELHAQIVALGKDTCRP-TP 211
Query: 697 NCGEC 711
C +C
Sbjct: 212 RCPDC 216
Score = 21.0 bits (42), Expect(2) = 4.9
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +1
Query: 478 TYLYEGCLE 504
TYL EGC+E
Sbjct: 106 TYLQEGCME 114
>UniRef50_Q1K3N2 Cluster: HhH-GPD; n=1; Desulfuromonas acetoxidans
DSM 684|Rep: HhH-GPD - Desulfuromonas acetoxidans DSM
684
Length = 220
Score = 33.5 bits (73), Expect = 5.3
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +1
Query: 523 VDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQ--WSEVNPLLVGFGQTICQPIKP 696
VD + RI +R+G + + R A+Q LP + ++E + LLV G+ C+ P
Sbjct: 145 VDAYTRRIFSRLGLLDAKARYDMVQRYAMQH-LPADTSLFNEFHALLVELGKVCCRSRNP 203
Query: 697 NCGEC 711
C C
Sbjct: 204 RCEAC 208
>UniRef50_A7DAW0 Cluster: HhH-GPD family protein; n=4;
Proteobacteria|Rep: HhH-GPD family protein -
Methylobacterium extorquens PA1
Length = 254
Score = 33.5 bits (73), Expect = 5.3
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
Frame = +1
Query: 505 QVTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWS-----EVNPLLVGFG 669
++ + VD+H HR+ R G + + L++ LP + WS + + +L+ G
Sbjct: 167 RMPALPVDSHHHRVAQRTGLIGAKVDVGP-SHAVLRAQLP-DDWSAQKLYDNHEVLMLHG 224
Query: 670 QTICQPIKPNCGECL 714
Q +C P CG C+
Sbjct: 225 QRVCFHRSPTCGRCV 239
>UniRef50_A1RWH1 Cluster: HhH-GPD family protein; n=1; Thermofilum
pendens Hrk 5|Rep: HhH-GPD family protein - Thermofilum
pendens (strain Hrk 5)
Length = 236
Score = 33.5 bits (73), Expect = 5.3
Identities = 17/63 (26%), Positives = 31/63 (49%)
Frame = +1
Query: 523 VDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIKPNC 702
+DTHV R+ R+G + + + +L + E + + L+ G+T+C+ P C
Sbjct: 159 IDTHVRRVSVRLGLARPGSYRAMQK--SLHGFFREEARLDAHLYLIKLGRTLCRAKNPLC 216
Query: 703 GEC 711
EC
Sbjct: 217 DEC 219
Score = 33.1 bits (72), Expect = 7.0
Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 9/88 (10%)
Frame = +2
Query: 254 LTAMQRLRAR-GLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDI-- 424
L A L R G+ + + EL + I P G + K K IK+ +L E+Y DI
Sbjct: 62 LKAFASLEERVGVECEKIRKAGLSELAEAIRPAGLQEQKAKAIKQVASLLYEKYGCDIGK 121
Query: 425 ------PDSVEKLCKLNGVGPKMAHICM 490
+ + +L ++ G+G K + +
Sbjct: 122 LLSRGVEEVIRELKQIEGIGDKTIDVLL 149
>UniRef50_UPI00015BB143 Cluster: HhH-GPD family protein; n=1;
Ignicoccus hospitalis KIN4/I|Rep: HhH-GPD family protein
- Ignicoccus hospitalis KIN4/I
Length = 212
Score = 33.1 bits (72), Expect = 7.0
Identities = 21/63 (33%), Positives = 29/63 (46%)
Frame = +1
Query: 523 VDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQPIKPNC 702
VDTHV R+ R+G V +RL L + E + L+ G+ C+ KP C
Sbjct: 139 VDTHVKRVAKRLGLVDGNAYKEVSSRL---KELFKGRTREAHMYLILLGRKYCKAKKPLC 195
Query: 703 GEC 711
EC
Sbjct: 196 SEC 198
>UniRef50_UPI0000DAE4DF Cluster: hypothetical protein
Rgryl_01000482; n=1; Rickettsiella grylli|Rep:
hypothetical protein Rgryl_01000482 - Rickettsiella
grylli
Length = 354
Score = 33.1 bits (72), Expect = 7.0
Identities = 19/81 (23%), Positives = 43/81 (53%)
Frame = +2
Query: 266 QRLRARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKL 445
QR T+ ++ + S +E+ +L +G++ + +++ + I++E+Y G P ++ L
Sbjct: 55 QRFTHHFPTLSSLANASLDEVIRLWSGLGYY-ARARHLHRCAQIIEEKYKGKFPQALILL 113
Query: 446 CKLNGVGPKMAHICMKVAWNK 508
L G+G A +A+N+
Sbjct: 114 QNLPGIGRSTAGAIRALAFNQ 134
>UniRef50_Q92AX1 Cluster: Lin1797 protein; n=11; Listeria|Rep:
Lin1797 protein - Listeria innocua
Length = 365
Score = 33.1 bits (72), Expect = 7.0
Identities = 14/78 (17%), Positives = 44/78 (56%)
Frame = +2
Query: 290 TVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGP 469
T+++ ++ + ++ + +G++ ++V+ ++ + ++G++P + + L GVGP
Sbjct: 71 TMESFVNADEADILKAWEGLGYY-SRVRNLQTAMKQVMTDFSGEVPSDLTTILSLKGVGP 129
Query: 470 KMAHICMKVAWNKSLESV 523
A + +A+N++ +V
Sbjct: 130 YTAGAILSIAYNQAEPAV 147
>UniRef50_Q6ALY8 Cluster: Probable endonuclease III; n=1;
Desulfotalea psychrophila|Rep: Probable endonuclease III
- Desulfotalea psychrophila
Length = 206
Score = 33.1 bits (72), Expect = 7.0
Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 8/84 (9%)
Frame = +2
Query: 287 LTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNG--------DIPDSVEK 442
L D +L++ ++ L +LI P GF+ K + ++ E Y G ++ + +
Sbjct: 47 LNYDALLALPEKALAELIKPAGFFNVKAARLGNLLVMIAENYGGKIDALLADELGQARQA 106
Query: 443 LCKLNGVGPKMAHICMKVAWNKSL 514
L K+ GVG + A + A K +
Sbjct: 107 LLKVRGVGEETADAILLYAAGKPI 130
>UniRef50_Q1GD89 Cluster: A/G-specific adenine glycosylase; n=10;
Alphaproteobacteria|Rep: A/G-specific adenine
glycosylase - Silicibacter sp. (strain TM1040)
Length = 353
Score = 33.1 bits (72), Expect = 7.0
Identities = 21/87 (24%), Positives = 44/87 (50%)
Frame = +2
Query: 266 QRLRARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKL 445
+R R V ++ + D ++ +G++ + + + K ++ E++ G PD+ E L
Sbjct: 66 ERFTRRWPRVGDLAAAEDGDVMAEWAGLGYY-ARARNLLKCARVVAEEFEGVFPDAYEGL 124
Query: 446 CKLNGVGPKMAHICMKVAWNKSLESVL 526
L G+GP A +A+++ E+VL
Sbjct: 125 IALPGIGPYTAAAISAIAFDRP-ETVL 150
>UniRef50_A7RIG3 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 470
Score = 33.1 bits (72), Expect = 7.0
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Frame = +1
Query: 505 QVTGIGVDTHVHRICNR---IGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQT 675
+ TG+ VD +V R+ +R IG T + +P ++ + N ++ FG T
Sbjct: 167 EATGV-VDGNVIRVLSRLRRIGADMTSNTTMDHFWSLAHRLVPNDRPGDFNQAMMEFGAT 225
Query: 676 ICQPIKPNCGECL 714
+C P P C +C+
Sbjct: 226 LCTPKTPQCSKCV 238
>UniRef50_A3LVQ0 Cluster: Predicted protein; n=5;
Saccharomycetales|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 789
Score = 33.1 bits (72), Expect = 7.0
Identities = 21/85 (24%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = +2
Query: 131 VSNNIHNHTHPNLYILKLLIGVQISMLSF-SDAIKPNQGPS*LTAMQRLRARGLTVDNVL 307
+SN I N PN ++L L + + + + I+ N+ P+ + L + ++
Sbjct: 647 LSNYISNRDWPNAFLLALTLDHSMRLYNVVKSCIEANEDPNSAIGSEPLE------ETII 700
Query: 308 SMSDEELGQLIYPVGFWKTKVKYIK 382
+SDE+L +L V W T K+ +
Sbjct: 701 QLSDEQLLKLFKKVRDWNTNFKFFE 725
>UniRef50_Q64A66 Cluster: 8-oxoguanine DNA glycosylase; n=1;
uncultured archaeon GZfos33E1|Rep: 8-oxoguanine DNA
glycosylase - uncultured archaeon GZfos33E1
Length = 288
Score = 33.1 bits (72), Expect = 7.0
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = +2
Query: 308 SMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVEKLCKLNGVGPKMAHIC 487
S++ +L ++ Y F K +K +L+E N D + ++L L GVGPK+A
Sbjct: 153 SVNKIKLCKVGYRAKFLSEIAKQVKNNPNLLEELRNSDYLELWDELRSLPGVGPKVADCV 212
Query: 488 MKVAWNK 508
A++K
Sbjct: 213 SLFAFDK 219
>UniRef50_A2SSI3 Cluster: HhH-GPD family protein; n=1;
Methanocorpusculum labreanum Z|Rep: HhH-GPD family
protein - Methanocorpusculum labreanum (strain ATCC
43576 / DSM 4855 / Z)
Length = 292
Score = 33.1 bits (72), Expect = 7.0
Identities = 14/53 (26%), Positives = 29/53 (54%)
Frame = +2
Query: 377 IKKTTGILKEQYNGDIPDSVEKLCKLNGVGPKMAHICMKVAWNKSLESVLTHM 535
++K G++ +YNG +P+ L L G+GP + A+N+ + + T++
Sbjct: 106 LQKLAGVIVNEYNGTVPEDPLVLKNLPGIGPATSCSIAAFAFNRPVVFIETNI 158
>UniRef50_A6Q9J3 Cluster: Endonuclease III; n=1; Sulfurovum sp.
NBC37-1|Rep: Endonuclease III - Sulfurovum sp. (strain
NBC37-1)
Length = 202
Score = 32.7 bits (71), Expect = 9.3
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Frame = +2
Query: 287 LTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNG----DIPDSVEKLCKL 454
LT++ +L + + +L + IYP GF+ K + G + E + + E L K
Sbjct: 60 LTLEGLLKLDEVQLKEHIYPSGFYNQKAPRLLTLAGNIAEDFRTFERFQSEVTREWLLKQ 119
Query: 455 NGVGPKMA 478
GVGP+ A
Sbjct: 120 KGVGPETA 127
>UniRef50_A7QBI8 Cluster: Chromosome chr13 scaffold_74, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr13 scaffold_74, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 975
Score = 32.7 bits (71), Expect = 9.3
Identities = 26/80 (32%), Positives = 34/80 (42%), Gaps = 17/80 (21%)
Frame = +1
Query: 523 VDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQ------WS-----------EVNP 651
VDT+V RI R+GWV PE +L L P + W E++
Sbjct: 548 VDTNVGRIAVRLGWVPLQP-LPESLQLHLLELYPMLESIQKYLWPRLCKLDQRTLYELHY 606
Query: 652 LLVGFGQTICQPIKPNCGEC 711
L+ FG+ C KPNC C
Sbjct: 607 QLITFGKVFCTKHKPNCNAC 626
>UniRef50_A7RXJ0 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 185
Score = 32.7 bits (71), Expect = 9.3
Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 5/43 (11%)
Frame = +1
Query: 409 VQWRHPRFSRKVVQT-EWCWS*NG----TYLYEGCLEQVTGIG 522
V+W+HP+ + ++++ + CWS G TYL G L +TG+G
Sbjct: 122 VRWQHPKKTNGILKSFKVCWSLEGVQGGTYLAPGTLYTLTGLG 164
>UniRef50_Q9SJQ6 Cluster: Protein ROS1; n=1; Arabidopsis thaliana|Rep:
Protein ROS1 - Arabidopsis thaliana (Mouse-ear cress)
Length = 1393
Score = 32.7 bits (71), Expect = 9.3
Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 17/80 (21%)
Frame = +1
Query: 523 VDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQ------WS-----------EVNP 651
VDT+V RI R+GWV PE +L L P + W E++
Sbjct: 970 VDTNVGRIAVRLGWVPLQP-LPESLQLHLLEMYPMLESIQKYLWPRLCKLDQKTLYELHY 1028
Query: 652 LLVGFGQTICQPIKPNCGEC 711
++ FG+ C KPNC C
Sbjct: 1029 QMITFGKVFCTKSKPNCNAC 1048
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 706,347,816
Number of Sequences: 1657284
Number of extensions: 14461917
Number of successful extensions: 36537
Number of sequences better than 10.0: 231
Number of HSP's better than 10.0 without gapping: 34906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36402
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57851245060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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