Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20576
         (718 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    23   3.3  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    23   3.3  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    22   4.3  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   7.6  

>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/19 (52%), Positives = 11/19 (57%), Gaps = 1/19 (5%)
 Frame = -3

Query: 182 VSKYINLD-VCGCGYYCSH 129
           +S  IN D  CG GY C H
Sbjct: 362 ISPSINDDGTCGNGYVCEH 380


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/19 (52%), Positives = 11/19 (57%), Gaps = 1/19 (5%)
 Frame = -3

Query: 182 VSKYINLD-VCGCGYYCSH 129
           +S  IN D  CG GY C H
Sbjct: 363 ISPSINDDGTCGNGYVCEH 381


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -3

Query: 197 VHLLKVSKYINLDVCGCGY 141
           +HL+    Y+ ++VC  GY
Sbjct: 280 LHLVVTPYYLLIEVCNAGY 298


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory
          receptor candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +2

Query: 41 SFCYFILHFPTTVNL 85
          +F +FI  FP T+N+
Sbjct: 28 TFAHFICLFPITINI 42


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,765
Number of Sequences: 336
Number of extensions: 4224
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)