Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20576
(718 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y09687-1|CAA70865.1| 303|Homo sapiens endonuclease III homologu... 123 7e-28
U81285-1|AAC51136.1| 304|Homo sapiens endonuclease III protein. 123 7e-28
BC003014-1|AAH03014.1| 304|Homo sapiens NTHL1 protein protein. 123 7e-28
BC000391-1|AAH00391.2| 305|Homo sapiens NTHL1 protein protein. 123 7e-28
AF498098-1|AAM11786.1| 312|Homo sapiens nth endonuclease III-li... 123 7e-28
AC005600-2|AAC34209.1| 312|Homo sapiens hNTH1 protein. 123 7e-28
AB014460-2|BAA32695.1| 304|Homo sapiens NTHL1/NTH1 protein. 123 7e-28
AB001575-1|BAA19413.1| 304|Homo sapiens endonuclease III homolo... 123 7e-28
U79718-1|AAB41534.1| 312|Homo sapiens endonuclease III homolog ... 119 9e-27
BC004153-1|AAH04153.1| 403|Homo sapiens poly(rC) binding protei... 31 4.1
BC003008-1|AAH03008.1| 403|Homo sapiens poly(rC) binding protei... 31 4.1
AK023993-1|BAB14761.1| 403|Homo sapiens protein ( Homo sapiens ... 31 4.1
AF257771-1|AAG02185.1| 369|Homo sapiens RNA binding protein MCG... 31 4.1
AF176330-1|AAG09241.1| 403|Homo sapiens alphaCP-4 protein. 31 4.1
AF092441-1|AAP97216.1| 397|Homo sapiens CBP protein. 31 4.1
X97249-1|CAA65884.1| 756|Homo sapiens leucine-rich primary resp... 30 9.5
U63329-1|AAC50618.1| 535|Homo sapiens mutY homolog protein. 30 9.5
BC012462-1|AAH12462.1| 522|Homo sapiens CENPI protein protein. 30 9.5
BC003178-1|AAH03178.1| 535|Homo sapiens mutY homolog (E. coli) ... 30 9.5
AL359540-10|CAI21721.1| 215|Homo sapiens mutY homolog (E. coli)... 30 9.5
AL359540-9|CAI21718.1| 535|Homo sapiens mutY homolog (E. coli) ... 30 9.5
AL359540-8|CAI21719.1| 546|Homo sapiens mutY homolog (E. coli) ... 30 9.5
AL359540-7|CAI21720.1| 536|Homo sapiens mutY homolog (E. coli) ... 30 9.5
AL359540-6|CAI21716.1| 541|Homo sapiens mutY homolog (E. coli) ... 30 9.5
AL359540-5|CAI21717.1| 546|Homo sapiens mutY homolog (E. coli) ... 30 9.5
AL359540-4|CAI21715.1| 291|Homo sapiens mutY homolog (E. coli) ... 30 9.5
AL359540-3|CAI21713.1| 521|Homo sapiens mutY homolog (E. coli) ... 30 9.5
AL359540-2|CAI21714.1| 522|Homo sapiens mutY homolog (E. coli) ... 30 9.5
AL109963-4|CAB72340.1| 756|Homo sapiens centromere protein I pr... 30 9.5
AL109963-3|CAI42268.1| 522|Homo sapiens centromere protein I pr... 30 9.5
AF527839-1|AAM78555.1| 546|Homo sapiens mutY homolog protein. 30 9.5
AB032929-1|BAA89345.1| 429|Homo sapiens hMYHgamma4 protein. 30 9.5
AB032928-1|BAA89344.1| 521|Homo sapiens hMYHgamma3 protein. 30 9.5
AB032927-1|BAA89343.1| 522|Homo sapiens hMYHgamma2 protein. 30 9.5
AB032926-1|BAA89342.1| 521|Homo sapiens hMYHbeta5 protein. 30 9.5
AB032925-1|BAA89341.1| 521|Homo sapiens hMYHbeta3 protein. 30 9.5
AB032924-1|BAA89340.1| 532|Homo sapiens hMYHbeta1 protein. 30 9.5
AB032923-1|BAA89339.1| 429|Homo sapiens hMYHalpha4 protein. 30 9.5
AB032922-1|BAA89338.1| 535|Homo sapiens hMYHalpha3 protein. 30 9.5
AB032921-1|BAA89337.1| 536|Homo sapiens hMYHalpha2 protein. 30 9.5
AB032920-1|BAA89336.1| 546|Homo sapiens hMYHalpha1 protein. 30 9.5
>Y09687-1|CAA70865.1| 303|Homo sapiens endonuclease III homologue 1
protein.
Length = 303
Score = 123 bits (296), Expect = 7e-28
Identities = 59/94 (62%), Positives = 73/94 (77%), Gaps = 1/94 (1%)
Frame = +2
Query: 260 AMQRLRARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVE 439
AMQRLRARGLTVD++L D LG+LIYPVGFW++KVKYIK+T+ IL++ Y GDIP SV
Sbjct: 141 AMQRLRARGLTVDSILQTDDATLGKLIYPVGFWRSKVKYIKQTSAILQQHYGGDIPASVA 200
Query: 440 KLCKLNGVGPKMAHICMKVAWNK-SLESVLTHMY 538
+L L GVGPKMAH+ M VAW S +V TH++
Sbjct: 201 ELVALPGVGPKMAHLAMAVAWGTVSGIAVDTHVH 234
Score = 109 bits (262), Expect = 1e-23
Identities = 46/70 (65%), Positives = 52/70 (74%)
Frame = +1
Query: 508 VTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQP 687
V+GI VDTHVHRI NR+ W KK TK+PEETR AL+ WLP E W E+N LLVGFGQ C P
Sbjct: 224 VSGIAVDTHVHRIANRLRWTKKATKSPEETRAALEEWLPRELWHEINGLLVGFGQQTCLP 283
Query: 688 IKPNCGECLN 717
+ P C CLN
Sbjct: 284 VHPRCHACLN 293
Score = 35.5 bits (78), Expect = 0.19
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +3
Query: 192 VYRYQCLVSLMLSSQTKDQV 251
V RYQ L+SLMLSSQTKDQV
Sbjct: 118 VRRYQVLLSLMLSSQTKDQV 137
>U81285-1|AAC51136.1| 304|Homo sapiens endonuclease III protein.
Length = 304
Score = 123 bits (296), Expect = 7e-28
Identities = 59/94 (62%), Positives = 73/94 (77%), Gaps = 1/94 (1%)
Frame = +2
Query: 260 AMQRLRARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVE 439
AMQRLRARGLTVD++L D LG+LIYPVGFW++KVKYIK+T+ IL++ Y GDIP SV
Sbjct: 142 AMQRLRARGLTVDSILQTDDATLGKLIYPVGFWRSKVKYIKQTSAILQQHYGGDIPASVA 201
Query: 440 KLCKLNGVGPKMAHICMKVAWNK-SLESVLTHMY 538
+L L GVGPKMAH+ M VAW S +V TH++
Sbjct: 202 ELVALPGVGPKMAHLAMAVAWGTVSGIAVDTHVH 235
Score = 109 bits (262), Expect = 1e-23
Identities = 46/70 (65%), Positives = 52/70 (74%)
Frame = +1
Query: 508 VTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQP 687
V+GI VDTHVHRI NR+ W KK TK+PEETR AL+ WLP E W E+N LLVGFGQ C P
Sbjct: 225 VSGIAVDTHVHRIANRLRWTKKATKSPEETRAALEEWLPRELWHEINGLLVGFGQQTCLP 284
Query: 688 IKPNCGECLN 717
+ P C CLN
Sbjct: 285 VHPRCHACLN 294
Score = 35.5 bits (78), Expect = 0.19
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +3
Query: 192 VYRYQCLVSLMLSSQTKDQV 251
V RYQ L+SLMLSSQTKDQV
Sbjct: 119 VRRYQVLLSLMLSSQTKDQV 138
>BC003014-1|AAH03014.1| 304|Homo sapiens NTHL1 protein protein.
Length = 304
Score = 123 bits (296), Expect = 7e-28
Identities = 59/94 (62%), Positives = 73/94 (77%), Gaps = 1/94 (1%)
Frame = +2
Query: 260 AMQRLRARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVE 439
AMQRLRARGLTVD++L D LG+LIYPVGFW++KVKYIK+T+ IL++ Y GDIP SV
Sbjct: 142 AMQRLRARGLTVDSILQTDDATLGKLIYPVGFWRSKVKYIKQTSAILQQHYGGDIPASVA 201
Query: 440 KLCKLNGVGPKMAHICMKVAWNK-SLESVLTHMY 538
+L L GVGPKMAH+ M VAW S +V TH++
Sbjct: 202 ELVALPGVGPKMAHLAMAVAWGTVSGIAVDTHVH 235
Score = 109 bits (262), Expect = 1e-23
Identities = 46/70 (65%), Positives = 52/70 (74%)
Frame = +1
Query: 508 VTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQP 687
V+GI VDTHVHRI NR+ W KK TK+PEETR AL+ WLP E W E+N LLVGFGQ C P
Sbjct: 225 VSGIAVDTHVHRIANRLRWTKKATKSPEETRAALEEWLPRELWHEINGLLVGFGQQTCLP 284
Query: 688 IKPNCGECLN 717
+ P C CLN
Sbjct: 285 VHPRCHACLN 294
Score = 35.5 bits (78), Expect = 0.19
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +3
Query: 192 VYRYQCLVSLMLSSQTKDQV 251
V RYQ L+SLMLSSQTKDQV
Sbjct: 119 VRRYQVLLSLMLSSQTKDQV 138
>BC000391-1|AAH00391.2| 305|Homo sapiens NTHL1 protein protein.
Length = 305
Score = 123 bits (296), Expect = 7e-28
Identities = 59/94 (62%), Positives = 73/94 (77%), Gaps = 1/94 (1%)
Frame = +2
Query: 260 AMQRLRARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVE 439
AMQRLRARGLTVD++L D LG+LIYPVGFW++KVKYIK+T+ IL++ Y GDIP SV
Sbjct: 143 AMQRLRARGLTVDSILQTDDATLGKLIYPVGFWRSKVKYIKQTSAILQQHYGGDIPASVA 202
Query: 440 KLCKLNGVGPKMAHICMKVAWNK-SLESVLTHMY 538
+L L GVGPKMAH+ M VAW S +V TH++
Sbjct: 203 ELVALPGVGPKMAHLAMAVAWGTVSGIAVDTHVH 236
Score = 109 bits (262), Expect = 1e-23
Identities = 46/70 (65%), Positives = 52/70 (74%)
Frame = +1
Query: 508 VTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQP 687
V+GI VDTHVHRI NR+ W KK TK+PEETR AL+ WLP E W E+N LLVGFGQ C P
Sbjct: 226 VSGIAVDTHVHRIANRLRWTKKATKSPEETRAALEEWLPRELWHEINGLLVGFGQQTCLP 285
Query: 688 IKPNCGECLN 717
+ P C CLN
Sbjct: 286 VHPRCHACLN 295
Score = 35.5 bits (78), Expect = 0.19
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +3
Query: 192 VYRYQCLVSLMLSSQTKDQV 251
V RYQ L+SLMLSSQTKDQV
Sbjct: 120 VRRYQVLLSLMLSSQTKDQV 139
>AF498098-1|AAM11786.1| 312|Homo sapiens nth endonuclease III-like
1 (E. coli) protein.
Length = 312
Score = 123 bits (296), Expect = 7e-28
Identities = 59/94 (62%), Positives = 73/94 (77%), Gaps = 1/94 (1%)
Frame = +2
Query: 260 AMQRLRARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVE 439
AMQRLRARGLTVD++L D LG+LIYPVGFW++KVKYIK+T+ IL++ Y GDIP SV
Sbjct: 150 AMQRLRARGLTVDSILQTDDATLGKLIYPVGFWRSKVKYIKQTSAILQQHYGGDIPASVA 209
Query: 440 KLCKLNGVGPKMAHICMKVAWNK-SLESVLTHMY 538
+L L GVGPKMAH+ M VAW S +V TH++
Sbjct: 210 ELVALPGVGPKMAHLAMAVAWGTVSGIAVDTHVH 243
Score = 109 bits (262), Expect = 1e-23
Identities = 46/70 (65%), Positives = 52/70 (74%)
Frame = +1
Query: 508 VTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQP 687
V+GI VDTHVHRI NR+ W KK TK+PEETR AL+ WLP E W E+N LLVGFGQ C P
Sbjct: 233 VSGIAVDTHVHRIANRLRWTKKATKSPEETRAALEEWLPRELWHEINGLLVGFGQQTCLP 292
Query: 688 IKPNCGECLN 717
+ P C CLN
Sbjct: 293 VHPRCHACLN 302
Score = 35.5 bits (78), Expect = 0.19
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +3
Query: 192 VYRYQCLVSLMLSSQTKDQV 251
V RYQ L+SLMLSSQTKDQV
Sbjct: 127 VRRYQVLLSLMLSSQTKDQV 146
>AC005600-2|AAC34209.1| 312|Homo sapiens hNTH1 protein.
Length = 312
Score = 123 bits (296), Expect = 7e-28
Identities = 59/94 (62%), Positives = 73/94 (77%), Gaps = 1/94 (1%)
Frame = +2
Query: 260 AMQRLRARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVE 439
AMQRLRARGLTVD++L D LG+LIYPVGFW++KVKYIK+T+ IL++ Y GDIP SV
Sbjct: 150 AMQRLRARGLTVDSILQTDDATLGKLIYPVGFWRSKVKYIKQTSAILQQHYGGDIPASVA 209
Query: 440 KLCKLNGVGPKMAHICMKVAWNK-SLESVLTHMY 538
+L L GVGPKMAH+ M VAW S +V TH++
Sbjct: 210 ELVALPGVGPKMAHLAMAVAWGTVSGIAVDTHVH 243
Score = 109 bits (262), Expect = 1e-23
Identities = 46/70 (65%), Positives = 52/70 (74%)
Frame = +1
Query: 508 VTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQP 687
V+GI VDTHVHRI NR+ W KK TK+PEETR AL+ WLP E W E+N LLVGFGQ C P
Sbjct: 233 VSGIAVDTHVHRIANRLRWTKKATKSPEETRAALEEWLPRELWHEINGLLVGFGQQTCLP 292
Query: 688 IKPNCGECLN 717
+ P C CLN
Sbjct: 293 VHPRCHACLN 302
Score = 35.5 bits (78), Expect = 0.19
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +3
Query: 192 VYRYQCLVSLMLSSQTKDQV 251
V RYQ L+SLMLSSQTKDQV
Sbjct: 127 VRRYQVLLSLMLSSQTKDQV 146
>AB014460-2|BAA32695.1| 304|Homo sapiens NTHL1/NTH1 protein.
Length = 304
Score = 123 bits (296), Expect = 7e-28
Identities = 59/94 (62%), Positives = 73/94 (77%), Gaps = 1/94 (1%)
Frame = +2
Query: 260 AMQRLRARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVE 439
AMQRLRARGLTVD++L D LG+LIYPVGFW++KVKYIK+T+ IL++ Y GDIP SV
Sbjct: 142 AMQRLRARGLTVDSILQTDDATLGKLIYPVGFWRSKVKYIKQTSAILQQHYGGDIPASVA 201
Query: 440 KLCKLNGVGPKMAHICMKVAWNK-SLESVLTHMY 538
+L L GVGPKMAH+ M VAW S +V TH++
Sbjct: 202 ELVALPGVGPKMAHLAMAVAWGTVSGIAVDTHVH 235
Score = 109 bits (262), Expect = 1e-23
Identities = 46/70 (65%), Positives = 52/70 (74%)
Frame = +1
Query: 508 VTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQP 687
V+GI VDTHVHRI NR+ W KK TK+PEETR AL+ WLP E W E+N LLVGFGQ C P
Sbjct: 225 VSGIAVDTHVHRIANRLRWTKKATKSPEETRAALEEWLPRELWHEINGLLVGFGQQTCLP 284
Query: 688 IKPNCGECLN 717
+ P C CLN
Sbjct: 285 VHPRCHACLN 294
Score = 35.5 bits (78), Expect = 0.19
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +3
Query: 192 VYRYQCLVSLMLSSQTKDQV 251
V RYQ L+SLMLSSQTKDQV
Sbjct: 119 VRRYQVLLSLMLSSQTKDQV 138
>AB001575-1|BAA19413.1| 304|Homo sapiens endonuclease III homolog
protein.
Length = 304
Score = 123 bits (296), Expect = 7e-28
Identities = 59/94 (62%), Positives = 73/94 (77%), Gaps = 1/94 (1%)
Frame = +2
Query: 260 AMQRLRARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVE 439
AMQRLRARGLTVD++L D LG+LIYPVGFW++KVKYIK+T+ IL++ Y GDIP SV
Sbjct: 142 AMQRLRARGLTVDSILQTDDATLGKLIYPVGFWRSKVKYIKQTSAILQQHYGGDIPASVA 201
Query: 440 KLCKLNGVGPKMAHICMKVAWNK-SLESVLTHMY 538
+L L GVGPKMAH+ M VAW S +V TH++
Sbjct: 202 ELVALPGVGPKMAHLAMAVAWGTVSGIAVDTHVH 235
Score = 109 bits (262), Expect = 1e-23
Identities = 46/70 (65%), Positives = 52/70 (74%)
Frame = +1
Query: 508 VTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQP 687
V+GI VDTHVHRI NR+ W KK TK+PEETR AL+ WLP E W E+N LLVGFGQ C P
Sbjct: 225 VSGIAVDTHVHRIANRLRWTKKATKSPEETRAALEEWLPRELWHEINGLLVGFGQQTCLP 284
Query: 688 IKPNCGECLN 717
+ P C CLN
Sbjct: 285 VHPRCHACLN 294
Score = 35.5 bits (78), Expect = 0.19
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +3
Query: 192 VYRYQCLVSLMLSSQTKDQV 251
V RYQ L+SLMLSSQTKDQV
Sbjct: 119 VRRYQVLLSLMLSSQTKDQV 138
>U79718-1|AAB41534.1| 312|Homo sapiens endonuclease III homolog 1,
hNTH1 protein.
Length = 312
Score = 119 bits (287), Expect = 9e-27
Identities = 57/94 (60%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
Frame = +2
Query: 260 AMQRLRARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVE 439
A+QRLRARGL VD++L D LG+LIYPVGFW++KVKYIK+T+ IL++ Y GDIP SV
Sbjct: 150 AIQRLRARGLAVDSILQTDDATLGKLIYPVGFWRSKVKYIKQTSAILQQHYGGDIPASVA 209
Query: 440 KLCKLNGVGPKMAHICMKVAWNK-SLESVLTHMY 538
+L L GVGPKMAH+ M VAW S +V TH++
Sbjct: 210 ELVALPGVGPKMAHLAMAVAWGTVSGIAVDTHVH 243
Score = 109 bits (262), Expect = 1e-23
Identities = 46/70 (65%), Positives = 52/70 (74%)
Frame = +1
Query: 508 VTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQP 687
V+GI VDTHVHRI NR+ W KK TK+PEETR AL+ WLP E W E+N LLVGFGQ C P
Sbjct: 233 VSGIAVDTHVHRIANRLRWTKKATKSPEETRAALEEWLPRELWHEINGLLVGFGQQTCLP 292
Query: 688 IKPNCGECLN 717
+ P C CLN
Sbjct: 293 VHPRCHACLN 302
Score = 35.5 bits (78), Expect = 0.19
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +3
Query: 192 VYRYQCLVSLMLSSQTKDQV 251
V RYQ L+SLMLSSQTKDQV
Sbjct: 127 VRRYQVLLSLMLSSQTKDQV 146
>BC004153-1|AAH04153.1| 403|Homo sapiens poly(rC) binding protein 4
protein.
Length = 403
Score = 31.1 bits (67), Expect = 4.1
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = +2
Query: 323 ELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGD-IPDSVEKLCKLNGVGPKMAHICMKVA 499
+ G LI G TK+K I++TTG + Q GD +P+S E+ ++GV P +C++
Sbjct: 112 QCGSLIGKAG---TKIKEIRETTG-AQVQVAGDLLPNSTERAVTVSGV-PDAIILCVRQI 166
Query: 500 WNKSLES 520
LES
Sbjct: 167 CAVILES 173
>BC003008-1|AAH03008.1| 403|Homo sapiens poly(rC) binding protein 4
protein.
Length = 403
Score = 31.1 bits (67), Expect = 4.1
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = +2
Query: 323 ELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGD-IPDSVEKLCKLNGVGPKMAHICMKVA 499
+ G LI G TK+K I++TTG + Q GD +P+S E+ ++GV P +C++
Sbjct: 112 QCGSLIGKAG---TKIKEIRETTG-AQVQVAGDLLPNSTERAVTVSGV-PDAIILCVRQI 166
Query: 500 WNKSLES 520
LES
Sbjct: 167 CAVILES 173
>AK023993-1|BAB14761.1| 403|Homo sapiens protein ( Homo sapiens
cDNA FLJ13931 fis, clone Y79AA1000752, moderately
similar to PUTATIVE HETEROGENEOUS NUCLEAR
RIBONUCLEOPROTEIN X. ).
Length = 403
Score = 31.1 bits (67), Expect = 4.1
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = +2
Query: 323 ELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGD-IPDSVEKLCKLNGVGPKMAHICMKVA 499
+ G LI G TK+K I++TTG + Q GD +P+S E+ ++GV P +C++
Sbjct: 112 QCGSLIGKAG---TKIKEIRETTG-AQVQVAGDLLPNSTERAVTVSGV-PDAIILCVRQI 166
Query: 500 WNKSLES 520
LES
Sbjct: 167 CAVILES 173
>AF257771-1|AAG02185.1| 369|Homo sapiens RNA binding protein MCG10
protein.
Length = 369
Score = 31.1 bits (67), Expect = 4.1
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = +2
Query: 323 ELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGD-IPDSVEKLCKLNGVGPKMAHICMKVA 499
+ G LI G TK+K I++TTG + Q GD +P+S E+ ++GV P +C++
Sbjct: 78 QCGSLIGKAG---TKIKEIRETTG-AQVQVAGDLLPNSTERAVTVSGV-PDAIILCVRQI 132
Query: 500 WNKSLES 520
LES
Sbjct: 133 CAVILES 139
>AF176330-1|AAG09241.1| 403|Homo sapiens alphaCP-4 protein.
Length = 403
Score = 31.1 bits (67), Expect = 4.1
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = +2
Query: 323 ELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGD-IPDSVEKLCKLNGVGPKMAHICMKVA 499
+ G LI G TK+K I++TTG + Q GD +P+S E+ ++GV P +C++
Sbjct: 112 QCGSLIGKAG---TKIKEIRETTG-AQVQVAGDLLPNSTERAVTVSGV-PDAIILCVRQI 166
Query: 500 WNKSLES 520
LES
Sbjct: 167 CAVILES 173
>AF092441-1|AAP97216.1| 397|Homo sapiens CBP protein.
Length = 397
Score = 31.1 bits (67), Expect = 4.1
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = +2
Query: 323 ELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDI-PDSVEKLCKLNGVGPKMAHICMKVA 499
+ G LI G TK+K I++TTG + Q GD+ P+S E+ ++GV P +C++
Sbjct: 112 QCGSLIGQAG---TKIKEIRETTG-AQVQVAGDLFPNSTERAVTVSGV-PDAIILCVRQI 166
Query: 500 WNKSLES 520
LES
Sbjct: 167 CAVILES 173
>X97249-1|CAA65884.1| 756|Homo sapiens leucine-rich primary
response protein protein.
Length = 756
Score = 29.9 bits (64), Expect = 9.5
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 601 LALQSWLPFEQWSEVNPLL 657
L L SW+PF +SEV PLL
Sbjct: 456 LQLVSWIPFSSFSEVKPLL 474
>U63329-1|AAC50618.1| 535|Homo sapiens mutY homolog protein.
Length = 535
Score = 29.9 bits (64), Expect = 9.5
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Frame = +1
Query: 505 QVTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQW------SEVNPLLVGF 666
Q TG+ VD +V R+ R V+ P T ++ Q W +Q + N +
Sbjct: 216 QATGV-VDGNVARVLCR---VRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFNQAAMEL 271
Query: 667 GQTICQPIKPNCGEC 711
G T+C P +P C +C
Sbjct: 272 GATVCTPQRPLCSQC 286
>BC012462-1|AAH12462.1| 522|Homo sapiens CENPI protein protein.
Length = 522
Score = 29.9 bits (64), Expect = 9.5
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 601 LALQSWLPFEQWSEVNPLL 657
L L SW+PF +SEV PLL
Sbjct: 456 LQLVSWIPFSSFSEVKPLL 474
>BC003178-1|AAH03178.1| 535|Homo sapiens mutY homolog (E. coli)
protein.
Length = 535
Score = 29.9 bits (64), Expect = 9.5
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Frame = +1
Query: 505 QVTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQW------SEVNPLLVGF 666
Q TG+ VD +V R+ R V+ P T ++ Q W +Q + N +
Sbjct: 216 QATGV-VDGNVARVLCR---VRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFNQAAMEL 271
Query: 667 GQTICQPIKPNCGEC 711
G T+C P +P C +C
Sbjct: 272 GATVCTPQRPLCSQC 286
>AL359540-10|CAI21721.1| 215|Homo sapiens mutY homolog (E. coli)
protein.
Length = 215
Score = 29.9 bits (64), Expect = 9.5
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Frame = +1
Query: 505 QVTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQW------SEVNPLLVGF 666
Q TG+ VD +V R+ R V+ P T ++ Q W +Q + N +
Sbjct: 74 QATGV-VDGNVARVLCR---VRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFNQAAMEL 129
Query: 667 GQTICQPIKPNCGEC 711
G T+C P +P C +C
Sbjct: 130 GATVCTPQRPLCSQC 144
>AL359540-9|CAI21718.1| 535|Homo sapiens mutY homolog (E. coli)
protein.
Length = 535
Score = 29.9 bits (64), Expect = 9.5
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Frame = +1
Query: 505 QVTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQW------SEVNPLLVGF 666
Q TG+ VD +V R+ R V+ P T ++ Q W +Q + N +
Sbjct: 216 QATGV-VDGNVARVLCR---VRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFNQAAMEL 271
Query: 667 GQTICQPIKPNCGEC 711
G T+C P +P C +C
Sbjct: 272 GATVCTPQRPLCSQC 286
>AL359540-8|CAI21719.1| 546|Homo sapiens mutY homolog (E. coli)
protein.
Length = 546
Score = 29.9 bits (64), Expect = 9.5
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Frame = +1
Query: 505 QVTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQW------SEVNPLLVGF 666
Q TG+ VD +V R+ R V+ P T ++ Q W +Q + N +
Sbjct: 227 QATGV-VDGNVARVLCR---VRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFNQAAMEL 282
Query: 667 GQTICQPIKPNCGEC 711
G T+C P +P C +C
Sbjct: 283 GATVCTPQRPLCSQC 297
>AL359540-7|CAI21720.1| 536|Homo sapiens mutY homolog (E. coli)
protein.
Length = 536
Score = 29.9 bits (64), Expect = 9.5
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Frame = +1
Query: 505 QVTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQW------SEVNPLLVGF 666
Q TG+ VD +V R+ R V+ P T ++ Q W +Q + N +
Sbjct: 217 QATGV-VDGNVARVLCR---VRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFNQAAMEL 272
Query: 667 GQTICQPIKPNCGEC 711
G T+C P +P C +C
Sbjct: 273 GATVCTPQRPLCSQC 287
>AL359540-6|CAI21716.1| 541|Homo sapiens mutY homolog (E. coli)
protein.
Length = 541
Score = 29.9 bits (64), Expect = 9.5
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Frame = +1
Query: 505 QVTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQW------SEVNPLLVGF 666
Q TG+ VD +V R+ R V+ P T ++ Q W +Q + N +
Sbjct: 222 QATGV-VDGNVARVLCR---VRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFNQAAMEL 277
Query: 667 GQTICQPIKPNCGEC 711
G T+C P +P C +C
Sbjct: 278 GATVCTPQRPLCSQC 292
>AL359540-5|CAI21717.1| 546|Homo sapiens mutY homolog (E. coli)
protein.
Length = 546
Score = 29.9 bits (64), Expect = 9.5
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Frame = +1
Query: 505 QVTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQW------SEVNPLLVGF 666
Q TG+ VD +V R+ R V+ P T ++ Q W +Q + N +
Sbjct: 227 QATGV-VDGNVARVLCR---VRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFNQAAMEL 282
Query: 667 GQTICQPIKPNCGEC 711
G T+C P +P C +C
Sbjct: 283 GATVCTPQRPLCSQC 297
>AL359540-4|CAI21715.1| 291|Homo sapiens mutY homolog (E. coli)
protein.
Length = 291
Score = 29.9 bits (64), Expect = 9.5
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Frame = +1
Query: 505 QVTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQW------SEVNPLLVGF 666
Q TG+ VD +V R+ R V+ P T ++ Q W +Q + N +
Sbjct: 213 QATGV-VDGNVARVLCR---VRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFNQAAMEL 268
Query: 667 GQTICQPIKPNCGEC 711
G T+C P +P C +C
Sbjct: 269 GATVCTPQRPLCSQC 283
>AL359540-3|CAI21713.1| 521|Homo sapiens mutY homolog (E. coli)
protein.
Length = 521
Score = 29.9 bits (64), Expect = 9.5
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Frame = +1
Query: 505 QVTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQW------SEVNPLLVGF 666
Q TG+ VD +V R+ R V+ P T ++ Q W +Q + N +
Sbjct: 202 QATGV-VDGNVARVLCR---VRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFNQAAMEL 257
Query: 667 GQTICQPIKPNCGEC 711
G T+C P +P C +C
Sbjct: 258 GATVCTPQRPLCSQC 272
>AL359540-2|CAI21714.1| 522|Homo sapiens mutY homolog (E. coli)
protein.
Length = 522
Score = 29.9 bits (64), Expect = 9.5
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Frame = +1
Query: 505 QVTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQW------SEVNPLLVGF 666
Q TG+ VD +V R+ R V+ P T ++ Q W +Q + N +
Sbjct: 203 QATGV-VDGNVARVLCR---VRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFNQAAMEL 258
Query: 667 GQTICQPIKPNCGEC 711
G T+C P +P C +C
Sbjct: 259 GATVCTPQRPLCSQC 273
>AL109963-4|CAB72340.1| 756|Homo sapiens centromere protein I
protein.
Length = 756
Score = 29.9 bits (64), Expect = 9.5
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 601 LALQSWLPFEQWSEVNPLL 657
L L SW+PF +SEV PLL
Sbjct: 456 LQLVSWIPFSSFSEVKPLL 474
>AL109963-3|CAI42268.1| 522|Homo sapiens centromere protein I
protein.
Length = 522
Score = 29.9 bits (64), Expect = 9.5
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 601 LALQSWLPFEQWSEVNPLL 657
L L SW+PF +SEV PLL
Sbjct: 456 LQLVSWIPFSSFSEVKPLL 474
>AF527839-1|AAM78555.1| 546|Homo sapiens mutY homolog protein.
Length = 546
Score = 29.9 bits (64), Expect = 9.5
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Frame = +1
Query: 505 QVTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQW------SEVNPLLVGF 666
Q TG+ VD +V R+ R V+ P T ++ Q W +Q + N +
Sbjct: 227 QATGV-VDGNVARVLCR---VRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFNQAAMEL 282
Query: 667 GQTICQPIKPNCGEC 711
G T+C P +P C +C
Sbjct: 283 GATVCTPQRPLCSQC 297
>AB032929-1|BAA89345.1| 429|Homo sapiens hMYHgamma4 protein.
Length = 429
Score = 29.9 bits (64), Expect = 9.5
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Frame = +1
Query: 505 QVTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQW------SEVNPLLVGF 666
Q TG+ VD +V R+ R V+ P T ++ Q W +Q + N +
Sbjct: 110 QATGV-VDGNVARVLCR---VRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFNQAAMEL 165
Query: 667 GQTICQPIKPNCGEC 711
G T+C P +P C +C
Sbjct: 166 GATVCTPQRPLCSQC 180
>AB032928-1|BAA89344.1| 521|Homo sapiens hMYHgamma3 protein.
Length = 521
Score = 29.9 bits (64), Expect = 9.5
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Frame = +1
Query: 505 QVTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQW------SEVNPLLVGF 666
Q TG+ VD +V R+ R V+ P T ++ Q W +Q + N +
Sbjct: 202 QATGV-VDGNVARVLCR---VRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFNQAAMEL 257
Query: 667 GQTICQPIKPNCGEC 711
G T+C P +P C +C
Sbjct: 258 GATVCTPQRPLCSQC 272
>AB032927-1|BAA89343.1| 522|Homo sapiens hMYHgamma2 protein.
Length = 522
Score = 29.9 bits (64), Expect = 9.5
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Frame = +1
Query: 505 QVTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQW------SEVNPLLVGF 666
Q TG+ VD +V R+ R V+ P T ++ Q W +Q + N +
Sbjct: 203 QATGV-VDGNVARVLCR---VRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFNQAAMEL 258
Query: 667 GQTICQPIKPNCGEC 711
G T+C P +P C +C
Sbjct: 259 GATVCTPQRPLCSQC 273
>AB032926-1|BAA89342.1| 521|Homo sapiens hMYHbeta5 protein.
Length = 521
Score = 29.9 bits (64), Expect = 9.5
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Frame = +1
Query: 505 QVTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQW------SEVNPLLVGF 666
Q TG+ VD +V R+ R V+ P T ++ Q W +Q + N +
Sbjct: 202 QATGV-VDGNVARVLCR---VRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFNQAAMEL 257
Query: 667 GQTICQPIKPNCGEC 711
G T+C P +P C +C
Sbjct: 258 GATVCTPQRPLCSQC 272
>AB032925-1|BAA89341.1| 521|Homo sapiens hMYHbeta3 protein.
Length = 521
Score = 29.9 bits (64), Expect = 9.5
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Frame = +1
Query: 505 QVTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQW------SEVNPLLVGF 666
Q TG+ VD +V R+ R V+ P T ++ Q W +Q + N +
Sbjct: 202 QATGV-VDGNVARVLCR---VRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFNQAAMEL 257
Query: 667 GQTICQPIKPNCGEC 711
G T+C P +P C +C
Sbjct: 258 GATVCTPQRPLCSQC 272
>AB032924-1|BAA89340.1| 532|Homo sapiens hMYHbeta1 protein.
Length = 532
Score = 29.9 bits (64), Expect = 9.5
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Frame = +1
Query: 505 QVTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQW------SEVNPLLVGF 666
Q TG+ VD +V R+ R V+ P T ++ Q W +Q + N +
Sbjct: 213 QATGV-VDGNVARVLCR---VRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFNQAAMEL 268
Query: 667 GQTICQPIKPNCGEC 711
G T+C P +P C +C
Sbjct: 269 GATVCTPQRPLCSQC 283
>AB032923-1|BAA89339.1| 429|Homo sapiens hMYHalpha4 protein.
Length = 429
Score = 29.9 bits (64), Expect = 9.5
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Frame = +1
Query: 505 QVTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQW------SEVNPLLVGF 666
Q TG+ VD +V R+ R V+ P T ++ Q W +Q + N +
Sbjct: 110 QATGV-VDGNVARVLCR---VRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFNQAAMEL 165
Query: 667 GQTICQPIKPNCGEC 711
G T+C P +P C +C
Sbjct: 166 GATVCTPQRPLCSQC 180
>AB032922-1|BAA89338.1| 535|Homo sapiens hMYHalpha3 protein.
Length = 535
Score = 29.9 bits (64), Expect = 9.5
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Frame = +1
Query: 505 QVTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQW------SEVNPLLVGF 666
Q TG+ VD +V R+ R V+ P T ++ Q W +Q + N +
Sbjct: 216 QATGV-VDGNVARVLCR---VRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFNQAAMEL 271
Query: 667 GQTICQPIKPNCGEC 711
G T+C P +P C +C
Sbjct: 272 GATVCTPQRPLCSQC 286
>AB032921-1|BAA89337.1| 536|Homo sapiens hMYHalpha2 protein.
Length = 536
Score = 29.9 bits (64), Expect = 9.5
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Frame = +1
Query: 505 QVTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQW------SEVNPLLVGF 666
Q TG+ VD +V R+ R V+ P T ++ Q W +Q + N +
Sbjct: 217 QATGV-VDGNVARVLCR---VRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFNQAAMEL 272
Query: 667 GQTICQPIKPNCGEC 711
G T+C P +P C +C
Sbjct: 273 GATVCTPQRPLCSQC 287
>AB032920-1|BAA89336.1| 546|Homo sapiens hMYHalpha1 protein.
Length = 546
Score = 29.9 bits (64), Expect = 9.5
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Frame = +1
Query: 505 QVTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQW------SEVNPLLVGF 666
Q TG+ VD +V R+ R V+ P T ++ Q W +Q + N +
Sbjct: 227 QATGV-VDGNVARVLCR---VRAIGADPSSTLVSQQLWGLAQQLVDPARPGDFNQAAMEL 282
Query: 667 GQTICQPIKPNCGEC 711
G T+C P +P C +C
Sbjct: 283 GATVCTPQRPLCSQC 297
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,951,784
Number of Sequences: 237096
Number of extensions: 2275171
Number of successful extensions: 7835
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 7718
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7835
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8399192100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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