Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20576
         (718 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011182-1|AAR88543.1|  391|Drosophila melanogaster RE40459p pro...   132   5e-31
AE014134-3322|AAF53949.2|  388|Drosophila melanogaster CG9272-PA...   132   5e-31
BT021240-1|AAX33388.1|  827|Drosophila melanogaster RE74651p pro...    31   1.6  
AF173374-1|AAD52607.1|  377|Drosophila melanogaster unknown prot...    31   1.6  
AE014298-2107|AAN09655.2|  827|Drosophila melanogaster CG33968-P...    31   1.6  

>BT011182-1|AAR88543.1|  391|Drosophila melanogaster RE40459p
           protein.
          Length = 391

 Score =  132 bits (319), Expect = 5e-31
 Identities = 53/71 (74%), Positives = 61/71 (85%)
 Frame = +1

Query: 505 QVTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQ 684
           ++TGIGVD HVHR+ NR+GWV KPTK PE+TR+AL+ WLPF  WSEVN L VGFGQTIC 
Sbjct: 304 KITGIGVDVHVHRLSNRLGWVPKPTKEPEQTRVALEKWLPFSLWSEVNHLFVGFGQTICT 363

Query: 685 PIKPNCGECLN 717
           P+KPNCGECLN
Sbjct: 364 PVKPNCGECLN 374



 Score =  101 bits (242), Expect = 1e-21
 Identities = 48/83 (57%), Positives = 58/83 (69%)
 Frame = +2

Query: 260 AMQRLRARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVE 439
           AM RL+ RGLT   V  M   EL  L++PV F+K K KY+K+T  IL ++Y  DIPD+V+
Sbjct: 222 AMNRLKDRGLTPLKVKEMPVTELENLLHPVSFYKNKAKYLKQTVEILTDKYGSDIPDNVK 281

Query: 440 KLCKLNGVGPKMAHICMKVAWNK 508
            L  L GVGPKMAHICM VAWNK
Sbjct: 282 DLVALPGVGPKMAHICMAVAWNK 304



 Score = 29.1 bits (62), Expect = 6.3
 Identities = 13/17 (76%), Positives = 16/17 (94%)
 Frame = +3

Query: 198 RYQCLVSLMLSSQTKDQ 248
           R+Q LV+LMLSSQTKD+
Sbjct: 201 RFQNLVALMLSSQTKDR 217


>AE014134-3322|AAF53949.2|  388|Drosophila melanogaster CG9272-PA
           protein.
          Length = 388

 Score =  132 bits (319), Expect = 5e-31
 Identities = 53/71 (74%), Positives = 61/71 (85%)
 Frame = +1

Query: 505 QVTGIGVDTHVHRICNRIGWVKKPTKTPEETRLALQSWLPFEQWSEVNPLLVGFGQTICQ 684
           ++TGIGVD HVHR+ NR+GWV KPTK PE+TR+AL+ WLPF  WSEVN L VGFGQTIC 
Sbjct: 299 KITGIGVDVHVHRLSNRLGWVPKPTKEPEQTRVALEKWLPFSLWSEVNHLFVGFGQTICT 358

Query: 685 PIKPNCGECLN 717
           P+KPNCGECLN
Sbjct: 359 PVKPNCGECLN 369



 Score =  101 bits (242), Expect = 1e-21
 Identities = 48/83 (57%), Positives = 58/83 (69%)
 Frame = +2

Query: 260 AMQRLRARGLTVDNVLSMSDEELGQLIYPVGFWKTKVKYIKKTTGILKEQYNGDIPDSVE 439
           AM RL+ RGLT   V  M   EL  L++PV F+K K KY+K+T  IL ++Y  DIPD+V+
Sbjct: 217 AMNRLKDRGLTPLKVKEMPVTELENLLHPVSFYKNKAKYLKQTVEILTDKYGSDIPDNVK 276

Query: 440 KLCKLNGVGPKMAHICMKVAWNK 508
            L  L GVGPKMAHICM VAWNK
Sbjct: 277 DLVALPGVGPKMAHICMAVAWNK 299



 Score = 30.7 bits (66), Expect = 2.1
 Identities = 14/17 (82%), Positives = 16/17 (94%)
 Frame = +3

Query: 198 RYQCLVSLMLSSQTKDQ 248
           R+Q LV+LMLSSQTKDQ
Sbjct: 196 RFQNLVALMLSSQTKDQ 212


>BT021240-1|AAX33388.1|  827|Drosophila melanogaster RE74651p
           protein.
          Length = 827

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
 Frame = -2

Query: 498 ATFIQICAILGPTPFSLHNFSTESGMSPLYCSFRIPVVFFMYFTF-VFQNPTGY 340
           AT   + ++LGP P    N+   S  + +Y +F  P+ + ++F++ VF +  GY
Sbjct: 647 ATVCVLASLLGPAPMGDINYVYNSTHAAIYAAF-APIAWCLFFSWIVFVSHNGY 699


>AF173374-1|AAD52607.1|  377|Drosophila melanogaster unknown
           protein.
          Length = 377

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
 Frame = -2

Query: 498 ATFIQICAILGPTPFSLHNFSTESGMSPLYCSFRIPVVFFMYFTF-VFQNPTGY 340
           AT   + ++LGP P    N+   S  + +Y +F  P+ + ++F++ VF +  GY
Sbjct: 197 ATVCVLASLLGPAPMGDINYVYNSTHAAIYAAF-APIAWCLFFSWIVFVSHNGY 249


>AE014298-2107|AAN09655.2|  827|Drosophila melanogaster CG33968-PA
           protein.
          Length = 827

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
 Frame = -2

Query: 498 ATFIQICAILGPTPFSLHNFSTESGMSPLYCSFRIPVVFFMYFTF-VFQNPTGY 340
           AT   + ++LGP P    N+   S  + +Y +F  P+ + ++F++ VF +  GY
Sbjct: 647 ATVCVLASLLGPAPMGDINYVYNSTHAAIYAAF-APIAWCLFFSWIVFVSHNGY 699


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,188,192
Number of Sequences: 53049
Number of extensions: 694487
Number of successful extensions: 1664
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1664
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3190721655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)