Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20575
         (719 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    30   0.016
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    30   0.016
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    24   1.4  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    24   1.4  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   7.6  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 30.3 bits (65), Expect = 0.016
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -1

Query: 512 PNFLYNHFYRQLRTILTKPQMCDQSNSQNTLWSH 411
           P   Y HF  +L T+L         N+ NT+WSH
Sbjct: 118 PRICYYHFTLELYTVLGAACQVCTPNATNTVWSH 151



 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +1

Query: 604 CKYCLPSDQHIVKARCQVVLRE 669
           C+ C P+  + V + CQ VL +
Sbjct: 137 CQVCTPNATNTVWSHCQCVLAD 158


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 30.3 bits (65), Expect = 0.016
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -1

Query: 512 PNFLYNHFYRQLRTILTKPQMCDQSNSQNTLWSH 411
           P   Y HF  +L T+L         N+ NT+WSH
Sbjct: 118 PRICYYHFTLELYTVLGAACQVCTPNATNTVWSH 151



 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +1

Query: 604 CKYCLPSDQHIVKARCQVVLRE 669
           C+ C P+  + V + CQ VL +
Sbjct: 137 CQVCTPNATNTVWSHCQCVLAD 158


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/37 (24%), Positives = 26/37 (70%), Gaps = 2/37 (5%)
 Frame = +3

Query: 105 LIKEIHPSIGEIRKKLQVKHIEEQELIK--IREVIAL 209
           +++E++  +G+I+KK   + ++E + ++  ++EV+ L
Sbjct: 338 IVEEMNEVLGDIKKKPTYQDLQEMKYLERCVKEVLRL 374


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/37 (24%), Positives = 26/37 (70%), Gaps = 2/37 (5%)
 Frame = +3

Query: 105 LIKEIHPSIGEIRKKLQVKHIEEQELIK--IREVIAL 209
           +++E++  +G+I+KK   + ++E + ++  ++EV+ L
Sbjct: 338 IVEEMNEVLGDIKKKPTYQDLQEMKYLERCVKEVLRL 374


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = -2

Query: 136 SPILGCISLIKSVIKYFVDSAELSGSSNFILCIISSLFLN 17
           SPI   I +I + + YF+      G   +I C I  L  N
Sbjct: 499 SPIFIIIPVILTSVCYFMIGLNSQGFRFYIACGIMILVAN 538


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,828
Number of Sequences: 336
Number of extensions: 3392
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)