Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20575
         (719 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_04_0366 - 16832018-16832371,16832746-16834752,16835109-16835480     30   2.1  
04_04_0752 - 27791126-27791167,27791792-27791863,27792771-277928...    30   2.1  
06_03_0610 - 22715637-22716797                                         29   4.9  
01_05_0475 - 22571571-22572466,22572626-22572947                       29   4.9  
09_04_0619 - 19001350-19001359,19001737-19001800,19001955-190020...    28   6.5  
02_04_0624 + 24538095-24538183,24538429-24538612,24538725-245388...    28   8.6  

>11_04_0366 - 16832018-16832371,16832746-16834752,16835109-16835480
          Length = 910

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 12/35 (34%), Positives = 23/35 (65%)
 Frame = +1

Query: 514 MCELWKSELLQILSDLHLAIDELLLSAMTLCKYCL 618
           +C+ +K E+LQ L + H+ ++EL + + T+   CL
Sbjct: 817 VCDPFKEEILQRLVNSHMMLEELHIESDTINSICL 851


>04_04_0752 -
           27791126-27791167,27791792-27791863,27792771-27792855,
           27792971-27793236,27794117-27794301,27794925-27795018,
           27795193-27795284,27795401-27795539,27796101-27796385
          Length = 419

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = +2

Query: 422 MYFVNWIDHTFEVLSKLSEVVYKNDYKENLGCVSSGNLNCCR 547
           ++F++W   T +V SK+     K+ +K  L  +      CCR
Sbjct: 349 IFFISWSPDTSKVRSKMLYASSKDRFKRELDGIQDNGAVCCR 390


>06_03_0610 - 22715637-22716797
          Length = 386

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = -1

Query: 539 NSDFQSSHIPNFLYNHFYRQ 480
           N DF++S I + + NHFYRQ
Sbjct: 107 NVDFEASTINSIIANHFYRQ 126


>01_05_0475 - 22571571-22572466,22572626-22572947
          Length = 405

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
 Frame = +3

Query: 114 EIHPSIG--EIRKKLQVKHIEEQELIKIREVIALCCNQIKKCVVNLLGISS 260
           E+ P IG  EI KK  V+H+  +E++K +    +C N     + NLLG  S
Sbjct: 108 EVLPIIGPQEIGKKTLVEHVLNEEMVKRKFSCIICLN--SDGLRNLLGDGS 156


>09_04_0619 -
           19001350-19001359,19001737-19001800,19001955-19002099,
           19002434-19002917,19003175-19003260,19003417-19003484,
           19003565-19003709,19004561-19004677
          Length = 372

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = -1

Query: 587 SSNSSIAR*RSLSICSNSDFQSSHIPNFLYNH 492
           S +S +AR   L ICS SD     IP   Y H
Sbjct: 315 SGDSYLARALDLKICSESDVFVPAIPGLFYGH 346


>02_04_0624 +
           24538095-24538183,24538429-24538612,24538725-24538886,
           24538988-24539225,24539301-24539370,24539439-24539530,
           24539799-24539836,24540018-24540039,24540462-24540618,
           24540702-24540753,24542144-24542207,24542279-24542362,
           24543418-24543543,24543622-24543818,24543903-24544091,
           24544186-24544434,24544507-24544556,24544977-24545059,
           24545164-24545449,24545751-24545794,24545878-24546626
          Length = 1074

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
 Frame = -1

Query: 113 LNQKRN*ILCRFCRVIRKLKFYFMH---YKFIISKFLL 9
           LNQ+ N I    CRV + ++ YF++   YK  IS  LL
Sbjct: 523 LNQEMNSICSNGCRVAKCMREYFIYKKNYKSAISSMLL 560


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,209,733
Number of Sequences: 37544
Number of extensions: 294316
Number of successful extensions: 705
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 704
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1874582652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)