Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20575
         (719 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    24   1.3  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    24   1.3  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    24   1.3  
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              22   5.1  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 7/27 (25%), Positives = 15/27 (55%)
 Frame = +2

Query: 422 MYFVNWIDHTFEVLSKLSEVVYKNDYK 502
           +YF+ W+ +    L+ L   ++  DY+
Sbjct: 363 VYFITWLGYVNSALNPLIYTIFNLDYR 389


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 7/27 (25%), Positives = 15/27 (55%)
 Frame = +2

Query: 422 MYFVNWIDHTFEVLSKLSEVVYKNDYK 502
           +YF+ W+ +    L+ L   ++  DY+
Sbjct: 363 VYFITWLGYVNSALNPLIYTIFNLDYR 389


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 7/27 (25%), Positives = 15/27 (55%)
 Frame = +2

Query: 422 MYFVNWIDHTFEVLSKLSEVVYKNDYK 502
           +YF+ W+ +    L+ L   ++  DY+
Sbjct: 363 VYFITWLGYVNSALNPLIYTIFNLDYR 389


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -2

Query: 187 LINSCSSMCLTCNFFRISPILGCISLIKSV 98
           LI  CS++  T    +I+ I  CI+  K++
Sbjct: 100 LITECSAISDTNVHLKITKIFQCITKFKTI 129


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,432
Number of Sequences: 438
Number of extensions: 4089
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22292145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)