Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20574
(728 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical pr... 35 0.052
U23448-8|AAL27226.1| 849|Caenorhabditis elegans Dnaj domain (pr... 34 0.091
U23448-7|AAM81128.1| 868|Caenorhabditis elegans Dnaj domain (pr... 34 0.091
U23448-6|AAL27225.1| 915|Caenorhabditis elegans Dnaj domain (pr... 34 0.091
U23448-5|AAL27227.1| 912|Caenorhabditis elegans Dnaj domain (pr... 34 0.091
AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical ... 33 0.16
AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical ... 33 0.16
Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical pr... 32 0.37
U38378-1|AAA79751.1| 418|Caenorhabditis elegans Hypothetical pr... 30 1.5
AL110499-3|CAE18038.1| 437|Caenorhabditis elegans Hypothetical ... 29 2.6
Z73102-15|CAA97416.1| 401|Caenorhabditis elegans Hypothetical p... 29 3.4
U61948-6|AAB03142.1| 497|Caenorhabditis elegans Hypothetical pr... 29 4.5
AC024770-5|AAK84605.2| 684|Caenorhabditis elegans Hypothetical ... 29 4.5
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z35599-2|CAD91629.2| 584|Caenorhabditis elegans Hypothetical pr... 28 7.9
Z35599-1|CAA84659.2| 581|Caenorhabditis elegans Hypothetical pr... 28 7.9
U41108-2|AAQ23121.2| 639|Caenorhabditis elegans Tropomodulin pr... 28 7.9
AL117193-1|CAB54981.1| 767|Caenorhabditis elegans Hypothetical ... 28 7.9
AF016663-5|AAC70880.1| 864|Caenorhabditis elegans Hypothetical ... 28 7.9
AC024817-16|AAF59585.2| 610|Caenorhabditis elegans Hypothetical... 28 7.9
>Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical
protein B0393.4 protein.
Length = 803
Score = 35.1 bits (77), Expect = 0.052
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 550 QEVSQSIPKTPPLQKKPTSPRKIIEPV-PPTPNRSAETVELLPQFELKLPKRPAR 711
Q ++ ++ TPP +P+SP + EP+ PP P E V++L E P P R
Sbjct: 32 QLLNVALTATPPPSVEPSSPTRPSEPIPPPLPEPIPELVQILLAAEPNKPSVPKR 86
>U23448-8|AAL27226.1| 849|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform b
protein.
Length = 849
Score = 34.3 bits (75), Expect = 0.091
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 533 LPMKSFRKSHSPSQRLHHCKRNLHHH 610
LP R H PS ++HH NLHHH
Sbjct: 128 LPSTPSRVPHHPSSQVHHFHHNLHHH 153
>U23448-7|AAM81128.1| 868|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform d
protein.
Length = 868
Score = 34.3 bits (75), Expect = 0.091
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 533 LPMKSFRKSHSPSQRLHHCKRNLHHH 610
LP R H PS ++HH NLHHH
Sbjct: 128 LPSTPSRVPHHPSSQVHHFHHNLHHH 153
>U23448-6|AAL27225.1| 915|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform a
protein.
Length = 915
Score = 34.3 bits (75), Expect = 0.091
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 533 LPMKSFRKSHSPSQRLHHCKRNLHHH 610
LP R H PS ++HH NLHHH
Sbjct: 128 LPSTPSRVPHHPSSQVHHFHHNLHHH 153
>U23448-5|AAL27227.1| 912|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform c
protein.
Length = 912
Score = 34.3 bits (75), Expect = 0.091
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +2
Query: 533 LPMKSFRKSHSPSQRLHHCKRNLHHH 610
LP R H PS ++HH NLHHH
Sbjct: 128 LPSTPSRVPHHPSSQVHHFHHNLHHH 153
>AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical
protein R148.3a protein.
Length = 1115
Score = 33.5 bits (73), Expect = 0.16
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = +1
Query: 508 EADELMNDFADEVFQEVSQSIPKTPPLQKKPTSPRKII--EPVPPTPNRSAETVE 666
E +E M + A++ V QS+P+TP QK P P + + EP+P P A+ ++
Sbjct: 241 EEEERMKNVAEQP-PLVLQSLPETPEAQKLPEEPLEPVTPEPIPEAPVPIAQYIQ 294
>AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical
protein R148.3b protein.
Length = 1130
Score = 33.5 bits (73), Expect = 0.16
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = +1
Query: 508 EADELMNDFADEVFQEVSQSIPKTPPLQKKPTSPRKII--EPVPPTPNRSAETVE 666
E +E M + A++ V QS+P+TP QK P P + + EP+P P A+ ++
Sbjct: 241 EEEERMKNVAEQP-PLVLQSLPETPEAQKLPEEPLEPVTPEPIPEAPVPIAQYIQ 294
>Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical
protein ZK1010.5 protein.
Length = 756
Score = 32.3 bits (70), Expect = 0.37
Identities = 20/62 (32%), Positives = 25/62 (40%)
Frame = +1
Query: 529 DFADEVFQEVSQSIPKTPPLQKKPTSPRKIIEPVPPTPNRSAETVELLPQFELKLPKRPA 708
D +E EV P +PP + P+ EPV PN S T LPQ P P
Sbjct: 572 DAPEEPATEVPNPQPPSPPSPEPEPEPKSTPEPVTDGPNESQSTA--LPQQTTDAPVDPV 629
Query: 709 RD 714
+
Sbjct: 630 TE 631
>U38378-1|AAA79751.1| 418|Caenorhabditis elegans Hypothetical
protein R11F4.3 protein.
Length = 418
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +1
Query: 574 KTPPLQKKPTSPRKIIEPVPPTPNRSAETVELLPQFELKLPKRPA 708
+ PP+ PT+P P PP P R+ + +P E++ P+ P+
Sbjct: 164 EVPPIPDAPTNPPTTTTPPPPPPTRAPRPI--IPT-EVRRPQMPS 205
>AL110499-3|CAE18038.1| 437|Caenorhabditis elegans Hypothetical
protein Y62F5A.10 protein.
Length = 437
Score = 29.5 bits (63), Expect = 2.6
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = +1
Query: 526 NDFADEVFQEVSQSIP-KTPPLQKK-PTSPRKIIEPVP--PTPNRSAETVE 666
N F +++ S P KTP Q PT+ R+I EPVP PTP S V+
Sbjct: 81 NVFHEQLTAPARSSTPLKTPAAQSPTPTADRQIGEPVPVAPTPALSEAPVK 131
>Z73102-15|CAA97416.1| 401|Caenorhabditis elegans Hypothetical
protein B0035.14 protein.
Length = 401
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +2
Query: 551 RKSHSPSQRLHHCKRNLHHHGKLLNLFPLLQIAVQKLL 664
R ++ Q+ HH ++ +G LL L PL+ I V LL
Sbjct: 257 RARYAQQQQYHHYEQQQSPYGPLLQLLPLIAIMVIGLL 294
>U61948-6|AAB03142.1| 497|Caenorhabditis elegans Hypothetical
protein C46A5.1 protein.
Length = 497
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 574 KTPPLQKKPTSPRKIIEPVPPTPNRSAETVELLPQFEL-KLPKRPARD 714
K+ +K+P +K+I+P+ P PN V L+ +L + P++P D
Sbjct: 63 KSKVTKKQPK--KKVIKPLAPVPNEQLGEVVLVKNVKLPETPQKPEND 108
>AC024770-5|AAK84605.2| 684|Caenorhabditis elegans Hypothetical
protein Y39H10A.6 protein.
Length = 684
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +3
Query: 177 QILKNHGVLIEPQSQDEKNETKSTVKK 257
Q L+NH L P+SQD+ ET+S ++K
Sbjct: 21 QRLQNHAQL-SPRSQDDPEETESVIRK 46
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +1
Query: 571 PKTPPLQKKPTSPRKIIEPVPPTPNR 648
P+TPP + PR P+PP P R
Sbjct: 172 PRTPPSPEPRNPPRTPPSPIPPPPPR 197
>Z35599-2|CAD91629.2| 584|Caenorhabditis elegans Hypothetical
protein F25F2.1b protein.
Length = 584
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/42 (26%), Positives = 28/42 (66%)
Frame = +2
Query: 5 KKIQKES*RKRNS*ERNQESSQEKEKQTSRYNKTKYTSIADE 130
KK +++S +K+NS E+ + ++K+K+ + + + +S ++E
Sbjct: 17 KKKKEKSTQKKNSLEKKNKKDKKKQKERKKKKEARDSSTSEE 58
>Z35599-1|CAA84659.2| 581|Caenorhabditis elegans Hypothetical
protein F25F2.1a protein.
Length = 581
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/42 (26%), Positives = 28/42 (66%)
Frame = +2
Query: 5 KKIQKES*RKRNS*ERNQESSQEKEKQTSRYNKTKYTSIADE 130
KK +++S +K+NS E+ + ++K+K+ + + + +S ++E
Sbjct: 17 KKKKEKSTQKKNSLEKKNKKDKKKQKERKKKKEARDSSTSEE 58
>U41108-2|AAQ23121.2| 639|Caenorhabditis elegans Tropomodulin
protein 2, isoform b protein.
Length = 639
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +1
Query: 568 IPKTPPLQKKPTSPRKIIEPVPPTPNRSAETVELLPQFELK 690
+PK P KK P+K+ +PP +S + E P K
Sbjct: 266 VPKLAPEPKKEPEPKKMAPKIPPAVPKSLVSPEPKPSLAPK 306
>AL117193-1|CAB54981.1| 767|Caenorhabditis elegans Hypothetical
protein Y105C5A.1 protein.
Length = 767
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +1
Query: 547 FQEVSQSIPKTPPLQKKPTSPRKIIEPVPPTPNRSAETVELLPQFELKLPKRP 705
FQ +++ P P++ S IE +PP P R+ E P+ L+ P+ P
Sbjct: 22 FQLQNRTRPAPTPIEYITLSSDDEIEVIPPPPKRAKMMEEQKPKDLLENPQLP 74
>AF016663-5|AAC70880.1| 864|Caenorhabditis elegans Hypothetical
protein F21E9.5 protein.
Length = 864
Score = 27.9 bits (59), Expect = 7.9
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 574 KTPPLQKKPTSPRKIIEPVPP 636
KTPP + PT P + EP+PP
Sbjct: 375 KTPPPPQLPTPPPIMAEPLPP 395
>AC024817-16|AAF59585.2| 610|Caenorhabditis elegans Hypothetical
protein Y54G2A.13 protein.
Length = 610
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/61 (24%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
Frame = +1
Query: 496 KYKDEADELMNDFADEVFQEVSQSIPKTPPLQ-KKPTSPRKIIEPVPPTPNRSAETVELL 672
K K + ++ND ++ + P T + T+ K+ P PP P + T L
Sbjct: 113 KCKSASTSVVNDSSNTSATATQTTTPLTTTFTLENATTKEKVTTPTPPPPTTTTPTTTLK 172
Query: 673 P 675
P
Sbjct: 173 P 173
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,871,955
Number of Sequences: 27780
Number of extensions: 253017
Number of successful extensions: 1573
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1395
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1570
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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