Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20573
         (498 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical pro...    23   1.2  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    21   4.7  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   4.7  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   6.2  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   6.2  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    21   8.1  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    21   8.1  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    21   8.1  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   8.1  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   8.1  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    21   8.1  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    21   8.1  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           21   8.1  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    21   8.1  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    21   8.1  

>AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical
           protein protein.
          Length = 86

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +3

Query: 249 IDLLSFIIVVYFVQLTMLCLYTHFHDLDLSGSN 347
           +  L F+I+   V   ++    HFH L LS  N
Sbjct: 26  LSALGFLIIAGCVSPFVIGYVKHFHPLALSNKN 58


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +3

Query: 276 VYFVQLTMLCLYTHFHDLDLS 338
           VYF++L +   +T   D+D+S
Sbjct: 441 VYFLRLAICSRFTEKADIDIS 461


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -3

Query: 388 VRIYAKNINGLQIQFE 341
           VRIY K I   +I FE
Sbjct: 63  VRIYCKEIRFFEISFE 78


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 104 TV*STLPDITYGKLLWK 54
           T  ST  DIT+ + +WK
Sbjct: 397 TTMSTFSDITFMRTVWK 413


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 4   RCLKTLYAHHHFAT 45
           RCL TL  ++H +T
Sbjct: 390 RCLNTLIFYYHIST 403


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
          protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 18 PLCASPLRHQPRFPQ 62
          P C SP +  P++PQ
Sbjct: 40 PACYSPPQVAPQYPQ 54


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
          protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 18 PLCASPLRHQPRFPQ 62
          P C SP +  P++PQ
Sbjct: 40 PACYSPPQVAPQYPQ 54


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
          protein.
          Length = 230

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 18 PLCASPLRHQPRFPQ 62
          P C SP +  P++PQ
Sbjct: 40 PACYSPPQVAPQYPQ 54


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 267 IIVVYFVQLTMLCLYTHF 320
           +I+ YF+ L M   Y H+
Sbjct: 184 VILPYFINLLMELQYCHY 201


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 267 IIVVYFVQLTMLCLYTHF 320
           +I+ YF+ L M   Y H+
Sbjct: 184 VILPYFINLLMELQYCHY 201


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
          protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 18 PLCASPLRHQPRFPQ 62
          P C SP +  P++PQ
Sbjct: 40 PACYSPPQVAPQYPQ 54


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
          protein.
          Length = 297

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 18 PLCASPLRHQPRFPQ 62
          P C SP +  P++PQ
Sbjct: 40 PACYSPPQVAPQYPQ 54


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 18 PLCASPLRHQPRFPQ 62
          P C SP +  P++PQ
Sbjct: 40 PACYSPPQVAPQYPQ 54


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
          protein.
          Length = 157

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 18 PLCASPLRHQPRFPQ 62
          P C SP +  P++PQ
Sbjct: 40 PACYSPPQVAPQYPQ 54


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
          Scr protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 18 PLCASPLRHQPRFPQ 62
          P C SP +  P++PQ
Sbjct: 40 PACYSPPQVAPQYPQ 54


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,110
Number of Sequences: 336
Number of extensions: 2354
Number of successful extensions: 17
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)