Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20573
(498 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_32323| Best HMM Match : WD40 (HMM E-Value=0) 43 2e-04
SB_13408| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_25894| Best HMM Match : Coatomer_WDAD (HMM E-Value=0) 39 0.003
SB_34371| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.014
SB_57108| Best HMM Match : WD40 (HMM E-Value=7.00649e-45) 36 0.025
SB_37154| Best HMM Match : WD40 (HMM E-Value=7.00649e-45) 36 0.025
SB_10223| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.043
SB_36694| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.075
SB_40766| Best HMM Match : WD40 (HMM E-Value=1.19993e-41) 33 0.099
SB_43456| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.13
SB_42943| Best HMM Match : WD40 (HMM E-Value=0) 31 0.40
SB_36541| Best HMM Match : WD40 (HMM E-Value=0) 31 0.40
SB_30344| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.40
SB_32324| Best HMM Match : WD40 (HMM E-Value=6.4e-21) 31 0.40
SB_19258| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.40
SB_40725| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.53
SB_5618| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.53
SB_3361| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.53
SB_20382| Best HMM Match : WD40 (HMM E-Value=1.7e-23) 31 0.70
SB_47540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.70
SB_57808| Best HMM Match : WD40 (HMM E-Value=2.5e-22) 29 1.6
SB_40185| Best HMM Match : WD40 (HMM E-Value=0) 29 1.6
SB_31688| Best HMM Match : WD40 (HMM E-Value=3.3e-10) 29 1.6
SB_42895| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_23517| Best HMM Match : WD40 (HMM E-Value=0) 29 2.1
SB_54574| Best HMM Match : WD40 (HMM E-Value=0) 28 3.7
SB_48711| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_46758| Best HMM Match : WD40 (HMM E-Value=5.8e-13) 28 4.9
SB_25576| Best HMM Match : WD40 (HMM E-Value=1.6e-30) 28 4.9
SB_6110| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_48750| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.5
SB_34510| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.5
SB_20870| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.5
SB_6741| Best HMM Match : WD40 (HMM E-Value=0) 27 6.5
SB_40103| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.5
SB_24139| Best HMM Match : WD40 (HMM E-Value=8.29989e-42) 27 6.5
SB_52576| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_50716| Best HMM Match : WD40 (HMM E-Value=0) 27 8.6
SB_48737| Best HMM Match : WD40 (HMM E-Value=1.5e-36) 27 8.6
SB_26375| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_19094| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_11169| Best HMM Match : WD40 (HMM E-Value=5.5001e-42) 27 8.6
>SB_32323| Best HMM Match : WD40 (HMM E-Value=0)
Length = 611
Score = 42.7 bits (96), Expect = 2e-04
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +1
Query: 4 RCLKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWECR*KHC 135
RCL TL H + + FH P+++S S DQT+++W + + C
Sbjct: 84 RCLFTLLGHLDYIRTTFFHHEYPWILSSSDDQTIRIWNWQSRTC 127
Score = 41.5 bits (93), Expect = 4e-04
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1
Query: 7 CLKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWE 117
C+ L H+H+ FH S V+S S+DQTV+VW+
Sbjct: 127 CICVLTGHNHYVMCAQFHPSEDMVVSASLDQTVRVWD 163
Score = 33.9 bits (74), Expect = 0.075
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +1
Query: 49 LDFHRSLPYVISGSVDQTVKVWECR*KHCHFSNLNSPMISLSLYFH 186
++FH P +SG D +KVW + K C F+ L + +FH
Sbjct: 57 INFHTVQPLFVSGGDDYKIKVWNYKQKRCLFTLLGHLDYIRTTFFH 102
Score = 29.9 bits (64), Expect = 1.2
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 19 LYAHHHFATSLDFHRSLPYVISGSVDQTVKVW 114
L H + FH ++P ++SG+ D+ VK+W
Sbjct: 203 LEGHDRGVNWVAFHPTMPLIVSGADDRQVKLW 234
>SB_13408| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 227
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/36 (47%), Positives = 25/36 (69%)
Frame = +1
Query: 10 LKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWE 117
++TLY H T+L+FH P +ISGS D TVK+++
Sbjct: 19 IRTLYDHAEEVTALEFHPCAPVLISGSKDCTVKLFD 54
>SB_25894| Best HMM Match : Coatomer_WDAD (HMM E-Value=0)
Length = 1066
Score = 38.7 bits (86), Expect = 0.003
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +1
Query: 7 CLKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVW 114
C++TL H + + FH LP +++GS D TV+VW
Sbjct: 119 CVQTLEGHAQNISCVGFHPELPIILTGSEDGTVRVW 154
Score = 31.1 bits (67), Expect = 0.53
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 25 AHHHFATSLDFHRSLPYVISGSVDQTVKVWE 117
AH + S+ H PYV++ S D +K+W+
Sbjct: 13 AHSDYLRSIAVHPQQPYVLTSSDDMLIKLWD 43
Score = 30.3 bits (65), Expect = 0.92
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +1
Query: 70 PYVISGSVDQTVKVWECR*KHC 135
PY+ISG+ D+ VK+W+ + K C
Sbjct: 98 PYLISGADDRLVKIWDYQNKTC 119
>SB_34371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 644
Score = 36.3 bits (80), Expect = 0.014
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +1
Query: 7 CLKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWECR*KHC 135
C+ TLY H +D H + V+SGS D T++VW+ +C
Sbjct: 391 CMHTLYGHTSTVRCMDMHEEV--VVSGSRDGTLRVWDTTTGNC 431
Score = 35.1 bits (77), Expect = 0.032
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +1
Query: 4 RCLKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWECR*KHC 135
+C+ TL H + SL F + Y++SGS+D +++VW C
Sbjct: 470 QCIHTLQGHTNRVYSLQFDGT--YIVSGSLDTSIRVWHAETGQC 511
Score = 33.1 bits (72), Expect = 0.13
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 4 RCLKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWECR*KHC 135
+CL TL H + ++ + ++SG+ D TVK+W+ C
Sbjct: 510 QCLHTLVGHQSLTSGMELRNNT--LVSGNADSTVKIWDITTGQC 551
Score = 31.5 bits (68), Expect = 0.40
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 4 RCLKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWECR*KHC 135
+CL+TL H S + ++SGS D+T+KVW +C
Sbjct: 350 KCLRTLTGHTGGVWSSQLSGHI--IVSGSTDRTLKVWNAETGYC 391
Score = 28.7 bits (61), Expect = 2.8
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Frame = +1
Query: 4 RCLKTLYA---HHHFATSLDFHRSLPYVISGSVDQTVKVWE 117
+CL+TL H T L F S +VI+ S D TVK+W+
Sbjct: 550 QCLQTLAGPNKHQSAVTCLQF--SSKFVITSSDDGTVKIWD 588
>SB_57108| Best HMM Match : WD40 (HMM E-Value=7.00649e-45)
Length = 243
Score = 35.5 bits (78), Expect = 0.025
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +1
Query: 7 CLKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWE 117
CL TL HH T L+ VISGS+D +K W+
Sbjct: 202 CLMTLAGHHDAVTCLNLTLDRRKVISGSLDHNLKFWD 238
Score = 28.3 bits (60), Expect = 3.7
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +1
Query: 76 VISGSVDQTVKVWECR*KHC 135
V+SGS D+T+KVW+ + +C
Sbjct: 97 VVSGSYDKTLKVWDIKTGNC 116
>SB_37154| Best HMM Match : WD40 (HMM E-Value=7.00649e-45)
Length = 870
Score = 35.5 bits (78), Expect = 0.025
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +1
Query: 7 CLKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWE 117
CL TL HH T L+ VISGS+D +K W+
Sbjct: 829 CLMTLAGHHDAVTCLNLTLDRRKVISGSLDHNLKFWD 865
Score = 28.3 bits (60), Expect = 3.7
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +1
Query: 76 VISGSVDQTVKVWECR*KHC 135
V+SGS D+T+KVW+ + +C
Sbjct: 724 VVSGSYDKTLKVWDIKTGNC 743
>SB_10223| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 945
Score = 34.7 bits (76), Expect = 0.043
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +1
Query: 7 CLKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWECR*KHC 135
C+ L H + L+F P+V+SGS D+T+K+W C
Sbjct: 634 CVLVLQGHEGAVSCLEF--DAPFVLSGSADKTIKLWNVESGDC 674
Score = 30.3 bits (65), Expect = 0.92
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 10 LKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWECR*KHC 135
L LY H + L F + ++SGS D T++VW+ R C
Sbjct: 595 LHVLYGHKGCVSCLRFDENT--LVSGSHDSTIRVWDMRTWEC 634
>SB_36694| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1803
Score = 33.9 bits (74), Expect = 0.075
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +1
Query: 1 TRCLKT-LYAHHHFATSLDFHRSLPYVISGSVDQTVKVWECR*KHCHFSNLNSP 159
T C+ T L H F +F S ++IS S+D T +VW H H + L P
Sbjct: 1623 TECVLTALGGHDMFCQYTEFSPSGEFIISSSIDNTAQVWRFD-THRHVTTLQHP 1675
Score = 28.7 bits (61), Expect = 2.8
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +1
Query: 10 LKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWE 117
L++L H TSL F ++ ++S ++D+ +KVW+
Sbjct: 1257 LRSLEGHEDRVTSLAFSKNGKRLVSVALDKKLKVWD 1292
Score = 27.9 bits (59), Expect = 4.9
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 19 LYAHHHFATSLDFHRSLPYVISGSVDQTVKVWEC 120
L H + + F + SGS D+TV+VW+C
Sbjct: 1454 LGGHSDWVMDVAFSSDGALLTSGSRDRTVRVWDC 1487
>SB_40766| Best HMM Match : WD40 (HMM E-Value=1.19993e-41)
Length = 1487
Score = 33.5 bits (73), Expect = 0.099
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1
Query: 4 RCLKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVW 114
R L+ L H +SL F S P +ISG+ D+TV++W
Sbjct: 1370 RLLEVLAGHEAPVSSLAFSPSHPVLISGAWDKTVRLW 1406
>SB_43456| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 359
Score = 33.1 bits (72), Expect = 0.13
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +1
Query: 4 RCLKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWECR-*KHCHFSNLNSPMISLSL 177
R + + H TSL F + ++SGS+D+ VKV++ + K H + SP++SL++
Sbjct: 223 RLVTSFSNHQKTITSLCFDGAYKRLLSGSIDRNVKVYDLQDYKVVHSMDYPSPILSLAV 281
>SB_42943| Best HMM Match : WD40 (HMM E-Value=0)
Length = 273
Score = 31.5 bits (68), Expect = 0.40
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = +1
Query: 13 KTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWE 117
K+L H+HF + + + +SGS D+T+++W+
Sbjct: 94 KSLTGHNHFVSDVVMSSDGQFALSGSWDKTLRLWD 128
>SB_36541| Best HMM Match : WD40 (HMM E-Value=0)
Length = 1070
Score = 31.5 bits (68), Expect = 0.40
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +1
Query: 4 RCLKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWECR*KH 132
+ +K L AH H ++ R+ ++S S D TVKVW+ H
Sbjct: 792 KLVKDLNAHTHAVMRIELLRAHNMLVSSSRDGTVKVWDVANAH 834
Score = 27.5 bits (58), Expect = 6.5
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 7 CLKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVW 114
C +TL H + + + +ISGS D+ VK+W
Sbjct: 496 CTQTLIGHSSWISCVAMTTDGKTIISGSNDKNVKMW 531
>SB_30344| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 418
Score = 31.5 bits (68), Expect = 0.40
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = +1
Query: 7 CLKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWECR*KHCHFS 144
C+ T H H +H ++ S S+D T K+W+ + C ++
Sbjct: 237 CVLTFADHTHAVWGCTWHSKGDFLASCSMDNTSKIWDLNSERCRYT 282
Score = 27.1 bits (57), Expect = 8.6
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Frame = +1
Query: 4 RCLKTLYAHHHFATSLDFHRSLPY---VISGSVDQTVKVWECR 123
RC TL H S+ F LPY +++ S D+T+ +W+ R
Sbjct: 278 RCRYTLRGHADSVNSIVF---LPYSNTLLTSSADKTLSLWDAR 317
>SB_32324| Best HMM Match : WD40 (HMM E-Value=6.4e-21)
Length = 123
Score = 31.5 bits (68), Expect = 0.40
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = +1
Query: 13 KTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWE 117
K+L H+HF + + + +SGS D+T+++W+
Sbjct: 57 KSLTGHNHFVSDVVMSSDGQFALSGSWDKTLRLWD 91
>SB_19258| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 459
Score = 31.5 bits (68), Expect = 0.40
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 7 CLKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVW 114
CL+ L HH ++ F Y+ SGS D+ V +W
Sbjct: 325 CLQVLSKHHEPVYTISFSPDGRYLASGSFDKRVHIW 360
>SB_40725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 428
Score = 31.1 bits (67), Expect = 0.53
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = +1
Query: 10 LKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWECR*KHCHFS 144
L+TL H SLDFH +V SGS+D +K H FS
Sbjct: 145 LRTLTGHKSSIRSLDFHPFGDFVASGSLDTNLKGHTDCVNHLRFS 189
>SB_5618| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 801
Score = 31.1 bits (67), Expect = 0.53
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +1
Query: 4 RCLKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWECR*KHC 135
+ LK H F + F ++IS S D T+K+W + C
Sbjct: 340 KTLKEFRGHTSFVNDVIFTADAHHIISASSDGTIKIWNIKSTEC 383
>SB_3361| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 247
Score = 31.1 bits (67), Expect = 0.53
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 7 CLKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKV 111
C+ T Y F S++FH S + +G D TVK+
Sbjct: 104 CVHTFYDPGGFVNSVEFHPSGTCIAAGGTDSTVKI 138
Score = 30.3 bits (65), Expect = 0.92
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1
Query: 10 LKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWECR*KHC 135
L +L AH ++ F ++SGS D+T+K+W+ K C
Sbjct: 63 LYSLNAHMNWVRCAKFSPDGRLIVSGSDDKTIKLWDRTSKDC 104
>SB_20382| Best HMM Match : WD40 (HMM E-Value=1.7e-23)
Length = 437
Score = 30.7 bits (66), Expect = 0.70
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +1
Query: 16 TLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWECR*KHCHFS 144
+LY H ++D +++GS D+ +K+W CH S
Sbjct: 241 SLYGHKLPVMAMDISSDSTLIVTGSADKNIKIWGLDFGDCHKS 283
>SB_47540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 622
Score = 30.7 bits (66), Expect = 0.70
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +1
Query: 4 RCLKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWECR 123
RC+ TL H L + ++ SGSVD TV +W +
Sbjct: 79 RCVHTLRQHSGDVLDLAWSPDDSFLASGSVDNTVTIWNAQ 118
>SB_57808| Best HMM Match : WD40 (HMM E-Value=2.5e-22)
Length = 195
Score = 29.5 bits (63), Expect = 1.6
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Frame = +1
Query: 4 RCL--KTLYAHHHFATSLDFHRSLPYVISGSVD--QTVKVWECR 123
RC+ KTL H +D+H ++SGS D Q +K+W+ R
Sbjct: 144 RCMEEKTLRGHGADVKCIDWHPHKSLLVSGSKDSQQPIKLWDTR 187
>SB_40185| Best HMM Match : WD40 (HMM E-Value=0)
Length = 503
Score = 29.5 bits (63), Expect = 1.6
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +1
Query: 10 LKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWE 117
L+ H + FH + Y+ +GS D+TV++W+
Sbjct: 160 LRIFAGHVSDVNKVAFHPNCNYIATGSSDRTVRLWD 195
>SB_31688| Best HMM Match : WD40 (HMM E-Value=3.3e-10)
Length = 841
Score = 29.5 bits (63), Expect = 1.6
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = +1
Query: 4 RCLKTLYAHHHFATSLDFHRSL-PYVISGSVDQTVKVWECR*KHCHFSNLNSPMISLSLY 180
+CL+TL H + FH S V SG + V++W+ + C + SL
Sbjct: 19 KCLRTLQGHPRTPWCIAFHPSADELVASGCLGGEVRIWDLK-GGCEMYTPPDRAVIASLA 77
Query: 181 FH 186
FH
Sbjct: 78 FH 79
>SB_42895| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 29.1 bits (62), Expect = 2.1
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +1
Query: 10 LKTLYAHHHFATSL-DFHRSLPYVISGSVDQTVKV 111
+K L H F S R + YV+SGS D T+KV
Sbjct: 32 MKRLKGHTSFVNSCCPSRRGMQYVVSGSDDSTIKV 66
>SB_23517| Best HMM Match : WD40 (HMM E-Value=0)
Length = 860
Score = 29.1 bits (62), Expect = 2.1
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +1
Query: 76 VISGSVDQTVKVWECR 123
+ISGS D T++ W+CR
Sbjct: 671 IISGSYDSTIRCWDCR 686
>SB_54574| Best HMM Match : WD40 (HMM E-Value=0)
Length = 1050
Score = 28.3 bits (60), Expect = 3.7
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 28 HHHFATSLDFHRSLPYVISGSVDQTVKVW 114
H +A S+ + ++SGS D+TVK+W
Sbjct: 759 HKGWAHSVGISKDSSKLVSGSEDETVKIW 787
>SB_48711| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 27.9 bits (59), Expect = 4.9
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +1
Query: 10 LKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVW 114
+ T H + L F R + S S D+TVK+W
Sbjct: 149 IHTFKGHRDVISGLAFRRGSHQLFSASHDKTVKIW 183
>SB_46758| Best HMM Match : WD40 (HMM E-Value=5.8e-13)
Length = 125
Score = 27.9 bits (59), Expect = 4.9
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +1
Query: 4 RCLKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWE 117
+ L TL+ H +D + +GS D+TV++W+
Sbjct: 10 KLLCTLFGHTGSVFCVDLDDAAKRAFTGSADRTVRIWD 47
>SB_25576| Best HMM Match : WD40 (HMM E-Value=1.6e-30)
Length = 326
Score = 27.9 bits (59), Expect = 4.9
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +1
Query: 13 KTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWECR*KHC 135
+TL H L F + ++ S S D T+K+W+ + C
Sbjct: 97 RTLKGHTDAVQDLAFDHTGKFLASSSADMTIKLWDFQGFEC 137
>SB_6110| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2051
Score = 27.9 bits (59), Expect = 4.9
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 10 LKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVW 114
L+T H SL S Y +S S D+TVK+W
Sbjct: 1731 LQTFTGHSGAVRSLCIQDSEHYFLSASKDKTVKLW 1765
>SB_48750| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 31
Score = 27.5 bits (58), Expect = 6.5
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = +1
Query: 70 PYVISGSVDQTVKVWE 117
PY+ISG+ D+ VK+W+
Sbjct: 14 PYLISGADDRLVKIWD 29
>SB_34510| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1845
Score = 27.5 bits (58), Expect = 6.5
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = +1
Query: 7 CLKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWECR*KHC 135
C+K HH+ L+ + +GS DQTV+ + + C
Sbjct: 1359 CVKVYDGHHNAVNCLEISEDRTRLFTGSNDQTVRSYNVKTAVC 1401
>SB_20870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2032
Score = 27.5 bits (58), Expect = 6.5
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +1
Query: 10 LKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWECR 123
L+TLY H H T + L +SGS D T V R
Sbjct: 1860 LQTLYGHDHEVTCVVLSWELDMAVSGSRDGTCIVHTAR 1897
>SB_6741| Best HMM Match : WD40 (HMM E-Value=0)
Length = 714
Score = 27.5 bits (58), Expect = 6.5
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +1
Query: 7 CLKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWE 117
CL L H F + ++ISGS D+T +W+
Sbjct: 90 CLAVLEGHTGAVRVCRFSPNSQFLISGSADETFIIWD 126
>SB_40103| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 284
Score = 27.5 bits (58), Expect = 6.5
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = +1
Query: 355 VIRLYFWHRFAH 390
+IR Y+WHR+AH
Sbjct: 73 IIRHYYWHRYAH 84
>SB_24139| Best HMM Match : WD40 (HMM E-Value=8.29989e-42)
Length = 198
Score = 27.5 bits (58), Expect = 6.5
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +1
Query: 7 CLKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWE 117
CL L H F + ++ISGS D+T +W+
Sbjct: 90 CLAVLEGHTGAVRVCRFSPNSQFLISGSADETFIIWD 126
>SB_52576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1649
Score = 27.1 bits (57), Expect = 8.6
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +1
Query: 10 LKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWE 117
L L H +L +++SG+ D TVK+W+
Sbjct: 741 LNKLLDHTKLVYTLALSPHADFLVSGAFDHTVKIWD 776
Score = 27.1 bits (57), Expect = 8.6
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 16 TLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWECR*KHCHFSN 147
TL H ++ + + +IS S D+TVK+W+ + C F N
Sbjct: 785 TLKGHKNWVSGVLVTPDSKRIISSSYDKTVKIWDV--ETCAFVN 826
>SB_50716| Best HMM Match : WD40 (HMM E-Value=0)
Length = 494
Score = 27.1 bits (57), Expect = 8.6
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 13 KTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVW 114
+ L H +DF Y++S S D+T+KVW
Sbjct: 307 RVLVGHRAAVNVVDFDDK--YIVSASGDRTIKVW 338
Score = 27.1 bits (57), Expect = 8.6
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 10 LKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWE 117
++TL H L + L V+SGS D T+++W+
Sbjct: 346 VRTLNGHRRGIACLQYRDRL--VVSGSSDNTIRLWD 379
Score = 27.1 bits (57), Expect = 8.6
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +1
Query: 7 CLKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWE 117
CL+ L H + F ++SG+ D +KVW+
Sbjct: 385 CLRVLEGHEELVRCIRFDNKR--IVSGAYDGKIKVWD 419
>SB_48737| Best HMM Match : WD40 (HMM E-Value=1.5e-36)
Length = 885
Score = 27.1 bits (57), Expect = 8.6
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 61 RSLPYVISGSVDQTVKVWECR*KHC 135
RSL ++SGS D VK+W K C
Sbjct: 77 RSLSVLLSGSCDGEVKLWNLPTKDC 101
>SB_26375| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 297
Score = 27.1 bits (57), Expect = 8.6
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +1
Query: 43 TSLDFHRSLPYVISGSVDQTVKVWECR*KHCHFSNLNS 156
T++ FH ++ +G D + ++W+ R K FS S
Sbjct: 86 TAVGFHEDGKWMFTGGEDSSARIWDLR-KQIDFSRTRS 122
>SB_19094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 27.1 bits (57), Expect = 8.6
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +1
Query: 10 LKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWECR*KHC 135
L +L H + +S+ +IS S D+++KVW+ + C
Sbjct: 80 LASLKEHDNVVSSVSVDCEKSRIISASWDRSIKVWDLTSEQC 121
>SB_11169| Best HMM Match : WD40 (HMM E-Value=5.5001e-42)
Length = 383
Score = 27.1 bits (57), Expect = 8.6
Identities = 11/41 (26%), Positives = 19/41 (46%)
Frame = +1
Query: 13 KTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWECR*KHC 135
+TL H + F Y+ SGS D+++++W C
Sbjct: 182 RTLRGHQGAVNVVAFSLDNRYIFSGSDDKSIRIWSRESSKC 222
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,095,162
Number of Sequences: 59808
Number of extensions: 296367
Number of successful extensions: 755
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 620
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 752
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1075029208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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