Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20573
(498 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81113-5|CAB03282.3| 404|Caenorhabditis elegans Hypothetical pr... 60 7e-10
AF164430-1|AAF82632.1| 404|Caenorhabditis elegans LIS-1 protein. 60 7e-10
AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical... 42 3e-04
Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical pr... 40 8e-04
AL032627-14|CAA21549.1| 386|Caenorhabditis elegans Hypothetical... 38 0.005
Z78544-3|CAB01760.1| 395|Caenorhabditis elegans Hypothetical pr... 37 0.007
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ... 37 0.007
Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical pr... 37 0.009
Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical pr... 37 0.009
AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein. 37 0.009
Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical pr... 36 0.012
U53340-3|AAA96208.1| 578|Caenorhabditis elegans Hypothetical pr... 34 0.050
U23139-7|AAK31492.1| 929|Caenorhabditis elegans Hypothetical pr... 34 0.066
Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical p... 33 0.15
Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical pr... 33 0.15
Z66561-2|CAA91460.1| 331|Caenorhabditis elegans Hypothetical pr... 33 0.15
Z73978-3|CAA98293.1| 501|Caenorhabditis elegans Hypothetical pr... 31 0.35
Z69664-1|CAA93514.1| 325|Caenorhabditis elegans Hypothetical pr... 31 0.35
Z81490-1|CAB04014.1| 510|Caenorhabditis elegans Hypothetical pr... 31 0.61
U80447-3|AAB37807.2| 910|Caenorhabditis elegans Hypothetical pr... 31 0.61
AF330595-1|AAK00353.1| 510|Caenorhabditis elegans SMU-1 protein. 31 0.61
Z70213-1|CAA94175.1| 1354|Caenorhabditis elegans Hypothetical pr... 30 0.81
Z68315-3|CAA92670.1| 430|Caenorhabditis elegans Hypothetical pr... 30 1.1
AF016428-6|AAK71396.2| 1733|Caenorhabditis elegans Hypothetical ... 29 1.4
AL110500-12|CAB60432.1| 362|Caenorhabditis elegans Hypothetical... 29 2.5
Z79639-1|CAB01916.1| 2948|Caenorhabditis elegans Hypothetical pr... 28 3.3
AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical ... 28 3.3
Z83122-11|CAB05603.2| 648|Caenorhabditis elegans Hypothetical p... 28 4.3
Z81073-10|CAB03035.2| 648|Caenorhabditis elegans Hypothetical p... 28 4.3
AY572975-1|AAT77228.1| 580|Caenorhabditis elegans KQT-3 potassi... 28 4.3
AL032648-2|CAA21699.2| 621|Caenorhabditis elegans Hypothetical ... 28 4.3
AF047661-5|AAU05544.1| 822|Caenorhabditis elegans Hypothetical ... 28 4.3
U23177-2|AAA64331.2| 538|Caenorhabditis elegans Hypothetical pr... 27 5.7
Z80215-3|CAB02270.1| 496|Caenorhabditis elegans Hypothetical pr... 27 7.6
U28730-7|AAA68258.2| 665|Caenorhabditis elegans Abnormal cell l... 27 7.6
AF275253-1|AAG28037.1| 665|Caenorhabditis elegans LIN-23 protein. 27 7.6
AF047651-2|AAL13318.1| 486|Caenorhabditis elegans Hypothetical ... 27 7.6
AF047651-1|AAK67207.1| 484|Caenorhabditis elegans Hypothetical ... 27 7.6
U23449-4|AAC24299.2| 534|Caenorhabditis elegans Hypothetical pr... 27 10.0
U21321-1|AAG00051.1| 507|Caenorhabditis elegans Fizzy (cdc20 pr... 27 10.0
AL132904-21|CAE54912.1| 133|Caenorhabditis elegans Hypothetical... 27 10.0
AF045642-2|AAC02580.1| 643|Caenorhabditis elegans Dynein chain,... 27 10.0
>Z81113-5|CAB03282.3| 404|Caenorhabditis elegans Hypothetical
protein T03F6.5 protein.
Length = 404
Score = 60.5 bits (140), Expect = 7e-10
Identities = 22/40 (55%), Positives = 32/40 (80%)
Frame = +1
Query: 4 RCLKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWECR 123
RC+K + AH HF +++ FH++ P+VI+GSVD + KVWECR
Sbjct: 365 RCMKAIEAHEHFVSTVAFHQTSPFVITGSVDMSCKVWECR 404
Score = 38.3 bits (85), Expect = 0.003
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +1
Query: 7 CLKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWECR*KHCHFS 144
CLK+L H H +S+ F + +V+S S D T+K W+ +C ++
Sbjct: 183 CLKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDISTGYCVYT 228
Score = 36.7 bits (81), Expect = 0.009
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +1
Query: 10 LKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWECR*KHC 135
L TL AH ++ L FH Y+IS + D+T++VWE + C
Sbjct: 325 LFTLLAHENWVRGLAFHPKGKYLISVADDKTLRVWELSAQRC 366
>AF164430-1|AAF82632.1| 404|Caenorhabditis elegans LIS-1 protein.
Length = 404
Score = 60.5 bits (140), Expect = 7e-10
Identities = 22/40 (55%), Positives = 32/40 (80%)
Frame = +1
Query: 4 RCLKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWECR 123
RC+K + AH HF +++ FH++ P+VI+GSVD + KVWECR
Sbjct: 365 RCMKAIEAHEHFVSTVAFHQTSPFVITGSVDMSCKVWECR 404
Score = 38.3 bits (85), Expect = 0.003
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +1
Query: 7 CLKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWECR*KHCHFS 144
CLK+L H H +S+ F + +V+S S D T+K W+ +C ++
Sbjct: 183 CLKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDISTGYCVYT 228
Score = 36.7 bits (81), Expect = 0.009
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +1
Query: 10 LKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWECR*KHC 135
L TL AH ++ L FH Y+IS + D+T++VWE + C
Sbjct: 325 LFTLLAHENWVRGLAFHPKGKYLISVADDKTLRVWELSAQRC 366
>AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical
protein Y71F9AL.17 protein.
Length = 1232
Score = 41.5 bits (93), Expect = 3e-04
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1
Query: 4 RCLKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVW 114
RC+ TL H + + FH P++IS S DQTV++W
Sbjct: 86 RCIFTLLGHLDYIRTTFFHHKYPWIISASDDQTVRIW 122
Score = 35.5 bits (78), Expect = 0.022
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 19 LYAHHHFATSLDFHRSLPYVISGSVDQTVKVWE 117
L H+H+ FH + V S S+DQTV+VW+
Sbjct: 133 LTGHNHYVMCAQFHPTEDLVASASLDQTVRVWD 165
Score = 33.9 bits (74), Expect = 0.066
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +1
Query: 55 FHRSLPYVISGSVDQTVKVWECR*KHCHFSNLNSPMISLSLYFH 186
FH P +SG D +KVW + K C F+ L + +FH
Sbjct: 61 FHHDQPIFVSGGDDYKIKVWNYKQKRCIFTLLGHLDYIRTTFFH 104
Score = 29.9 bits (64), Expect = 1.1
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 19 LYAHHHFATSLDFHRSLPYVISGSVDQTVKVW 114
L H + FH + P ++SGS D+ VK+W
Sbjct: 203 LEGHDRGVNWVAFHHTNPILVSGSDDRQVKIW 234
Score = 29.5 bits (63), Expect = 1.4
Identities = 10/36 (27%), Positives = 23/36 (63%)
Frame = +1
Query: 10 LKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWE 117
L + H++ +S+ FH + ++S S D++++VW+
Sbjct: 244 LDSCRGHYNNVSSVIFHPNADLILSNSEDKSIRVWD 279
>Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical
protein F38E11.5 protein.
Length = 1000
Score = 40.3 bits (90), Expect = 8e-04
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +1
Query: 7 CLKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVW 114
C++TL H +S+ FH LP +I+GS D TV++W
Sbjct: 221 CVQTLDGHAQNVSSVCFHPELPLIITGSEDSTVRLW 256
Score = 36.7 bits (81), Expect = 0.009
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +1
Query: 25 AHHHFATSLDFHRSLPYVISGSVDQTVKVWE 117
AH + SL H +LPYVIS S D VK+W+
Sbjct: 97 AHSDYLRSLVVHPTLPYVISSSDDMLVKMWD 127
Score = 33.5 bits (73), Expect = 0.087
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +1
Query: 16 TLYAHHHFATSLDFHRS--LPYVISGSVDQTVKVWECR*KHC 135
TL H +D++ PY+ISG+ D VK+W+ + K C
Sbjct: 180 TLEGHEKGVNCVDYYHGGEKPYIISGADDHLVKIWDYQNKTC 221
>AL032627-14|CAA21549.1| 386|Caenorhabditis elegans Hypothetical
protein Y41C4A.11 protein.
Length = 386
Score = 37.5 bits (83), Expect = 0.005
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +1
Query: 25 AHHHFATSLDFHRSLPYVISGSVDQTVKVWE 117
AH F SL H +LPY+IS S D+ ++VW+
Sbjct: 189 AHSDFIRSLTVHPTLPYLISASDDRKIRVWD 219
Score = 27.9 bits (59), Expect = 4.3
Identities = 14/38 (36%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +1
Query: 4 RCLKTLY-AHHHFATSLDFHRSLPYVISGSVDQTVKVW 114
+C++TL AH + T + ++ ++ISG+ D TVK+W
Sbjct: 309 KCIETLKNAHKNNVTFVTPFKT--WIISGAEDSTVKIW 344
Score = 26.6 bits (56), Expect = 10.0
Identities = 11/31 (35%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +1
Query: 28 HHHFATSLDFHRSLPYV-ISGSVDQTVKVWE 117
H H+ + + P + +SGS+D+T+KVW+
Sbjct: 233 HAHYIMQIAVNPEDPEMFVSGSLDKTLKVWK 263
>Z78544-3|CAB01760.1| 395|Caenorhabditis elegans Hypothetical
protein K04G11.4 protein.
Length = 395
Score = 37.1 bits (82), Expect = 0.007
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +1
Query: 4 RCLKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWECR*KHCHFS 144
RC+KTL H ++ F+ S + SGS D+T+++W R + FS
Sbjct: 181 RCVKTLKGHTNYVFCCCFNPSGTLIASGSFDETIRIWCARNGNTIFS 227
Score = 27.5 bits (58), Expect = 5.7
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +1
Query: 28 HHHFATSLDFHRSLPYVISGSVDQTVKVWE 117
H +S+ F+R Y+ SGS D V++W+
Sbjct: 231 HEDPVSSVCFNRDGAYLASGSYDGIVRIWD 260
Score = 27.1 bits (57), Expect = 7.6
Identities = 11/38 (28%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +1
Query: 7 CLKTLYAHHHFA-TSLDFHRSLPYVISGSVDQTVKVWE 117
C+KTL H T + F + Y+++ +++ T+K+W+
Sbjct: 266 CVKTLIDEEHPPITHVKFSPNGKYILASNLNNTLKLWD 303
>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
protein Y32H12A.8 protein.
Length = 3901
Score = 37.1 bits (82), Expect = 0.007
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
Frame = +1
Query: 25 AHHHFATSLDFHRSLPYV-ISGSVDQTVKVWECR*KHCH---FSNLNSPMI 165
+H AT LD+H + PY+ +SGS D TVK ++ R K H FS+ N I
Sbjct: 142 SHERSATCLDWHATTPYILVSGSRDCTVKSYDMRVKDNHQLTFSDRNCESI 192
>Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical
protein F55B12.3b protein.
Length = 585
Score = 36.7 bits (81), Expect = 0.009
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +1
Query: 4 RCLKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWE 117
RC++TL H++ SL F V SGS+D +++VW+
Sbjct: 407 RCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWD 444
Score = 31.1 bits (67), Expect = 0.46
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 4 RCLKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWECR*KHC 135
R L TL+ HH + F + V+SG D TVK+W C
Sbjct: 367 RHLATLHGHHAAVRCVQFDGTT--VVSGGYDFTVKIWNAHTGRC 408
Score = 29.5 bits (63), Expect = 1.4
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = +1
Query: 73 YVISGSVDQTVKVW 114
Y++SGS D+TVKVW
Sbjct: 308 YIVSGSTDRTVKVW 321
>Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical
protein F55B12.3a protein.
Length = 587
Score = 36.7 bits (81), Expect = 0.009
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +1
Query: 4 RCLKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWE 117
RC++TL H++ SL F V SGS+D +++VW+
Sbjct: 409 RCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWD 446
Score = 31.1 bits (67), Expect = 0.46
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 4 RCLKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWECR*KHC 135
R L TL+ HH + F + V+SG D TVK+W C
Sbjct: 369 RHLATLHGHHAAVRCVQFDGTT--VVSGGYDFTVKIWNAHTGRC 410
Score = 29.5 bits (63), Expect = 1.4
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = +1
Query: 73 YVISGSVDQTVKVW 114
Y++SGS D+TVKVW
Sbjct: 310 YIVSGSTDRTVKVW 323
>AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein.
Length = 587
Score = 36.7 bits (81), Expect = 0.009
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +1
Query: 4 RCLKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWE 117
RC++TL H++ SL F V SGS+D +++VW+
Sbjct: 409 RCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWD 446
Score = 31.1 bits (67), Expect = 0.46
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +1
Query: 4 RCLKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWECR*KHC 135
R L TL+ HH + F + V+SG D TVK+W C
Sbjct: 369 RHLATLHGHHAAVRCVQFDGTT--VVSGGYDFTVKIWNAHTGRC 410
Score = 29.5 bits (63), Expect = 1.4
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = +1
Query: 73 YVISGSVDQTVKVW 114
Y++SGS D+TVKVW
Sbjct: 310 YIVSGSTDRTVKVW 323
>Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical
protein C14B1.4 protein.
Length = 376
Score = 36.3 bits (80), Expect = 0.012
Identities = 14/45 (31%), Positives = 27/45 (60%)
Frame = +1
Query: 1 TRCLKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWECR*KHC 135
+R KTL H+++ +F+ V+SGS D++V++W+ + C
Sbjct: 161 SRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMC 205
Score = 35.5 bits (78), Expect = 0.022
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +1
Query: 7 CLKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWECR*KHC 135
C+KTL AH +++ F+R + SGS D V++W+ C
Sbjct: 205 CIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQC 247
>U53340-3|AAA96208.1| 578|Caenorhabditis elegans Hypothetical
protein F02E8.5 protein.
Length = 578
Score = 34.3 bits (75), Expect = 0.050
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +1
Query: 1 TRCLKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWECR*KHC 135
+R L TL H T + F++S +SGS D+ +K+W+ + + C
Sbjct: 368 SRLLSTLSGHSDQVTCVKFYQSHS-AVSGSADRVIKIWDIQNQRC 411
>U23139-7|AAK31492.1| 929|Caenorhabditis elegans Hypothetical
protein F13H8.2 protein.
Length = 929
Score = 33.9 bits (74), Expect = 0.066
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +1
Query: 16 TLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWECR*KHCHFS 144
+LY H T +D S ++GSVD++VKVW CH S
Sbjct: 581 SLYGHSLPVTCVDIAPSSKLCVTGSVDKSVKVWGLDFGDCHKS 623
>Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical
protein D2030.9b protein.
Length = 530
Score = 32.7 bits (71), Expect = 0.15
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +1
Query: 28 HHHFATSLDFHRSLPYVISGSVDQTVKVWECR*KHCHFSNLN 153
H T +D + Y++S S DQT+KVW+ R FSN++
Sbjct: 317 HRDGVTHVDSRQDERYLLSNSKDQTIKVWDLR----KFSNMS 354
>Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical
protein D2030.9a protein.
Length = 571
Score = 32.7 bits (71), Expect = 0.15
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +1
Query: 28 HHHFATSLDFHRSLPYVISGSVDQTVKVWECR*KHCHFSNLN 153
H T +D + Y++S S DQT+KVW+ R FSN++
Sbjct: 358 HRDGVTHVDSRQDERYLLSNSKDQTIKVWDLR----KFSNMS 395
>Z66561-2|CAA91460.1| 331|Caenorhabditis elegans Hypothetical
protein F08G12.2 protein.
Length = 331
Score = 32.7 bits (71), Expect = 0.15
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1
Query: 22 YAHHHFATSLDFHRSLPYVISGSVDQTVKVWECR 123
Y + + T++ F+ S VISG +D +KVW+ R
Sbjct: 162 YTNRYQQTAVTFNDSSDQVISGGIDNVLKVWDMR 195
>Z73978-3|CAA98293.1| 501|Caenorhabditis elegans Hypothetical
protein ZC302.2a protein.
Length = 501
Score = 31.5 bits (68), Expect = 0.35
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +1
Query: 7 CLKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWE 117
CL+T+ H ++ F+ + S D+TV+VW+
Sbjct: 289 CLRTMRGHTNYVFCCSFNPQSSLIASAGFDETVRVWD 325
>Z69664-1|CAA93514.1| 325|Caenorhabditis elegans Hypothetical
protein K04D7.1 protein.
Length = 325
Score = 31.5 bits (68), Expect = 0.35
Identities = 11/38 (28%), Positives = 24/38 (63%)
Frame = +1
Query: 4 RCLKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWE 117
R +++L H+HF + + + +SGS D+T+++W+
Sbjct: 60 RPVRSLTGHNHFVSDVVISSDGQFALSGSWDKTLRLWD 97
>Z81490-1|CAB04014.1| 510|Caenorhabditis elegans Hypothetical
protein CC4.3 protein.
Length = 510
Score = 30.7 bits (66), Expect = 0.61
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +1
Query: 4 RCLKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWECR*KHC 135
+CLK + H + T + + ++IS S D +++VW + C
Sbjct: 340 KCLKEMRGHSSYITDVRYSDEGNHIISCSTDGSIRVWHGKSGEC 383
>U80447-3|AAB37807.2| 910|Caenorhabditis elegans Hypothetical
protein F55F8.3 protein.
Length = 910
Score = 30.7 bits (66), Expect = 0.61
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 10 LKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVW 114
L L H +S+D H + +++SGS D+T+K+W
Sbjct: 481 LDILSGHESAISSIDIHGN--HIVSGSWDRTIKMW 513
>AF330595-1|AAK00353.1| 510|Caenorhabditis elegans SMU-1 protein.
Length = 510
Score = 30.7 bits (66), Expect = 0.61
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +1
Query: 4 RCLKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWECR*KHC 135
+CLK + H + T + + ++IS S D +++VW + C
Sbjct: 340 KCLKEMRGHSSYITDVRYSDEGNHIISCSTDGSIRVWHGKSGEC 383
>Z70213-1|CAA94175.1| 1354|Caenorhabditis elegans Hypothetical protein
ZK930.1 protein.
Length = 1354
Score = 30.3 bits (65), Expect = 0.81
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +1
Query: 19 LYAHHHFATSLDFHRSLPYVISGSVDQTVKVWECR 123
L+ H T L +R +SGS D TVKVW+ R
Sbjct: 964 LHEHSGKITKLCANRESDLFLSGSTDGTVKVWKTR 998
>Z68315-3|CAA92670.1| 430|Caenorhabditis elegans Hypothetical
protein F28C6.3 protein.
Length = 430
Score = 29.9 bits (64), Expect = 1.1
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +1
Query: 10 LKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWE 117
++TLY H ++ FH +ISGS D+TVK+++
Sbjct: 163 IRTLYDHVDDVNTVIFHPRDSILISGSNDKTVKLFD 198
Score = 28.7 bits (61), Expect = 2.5
Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +1
Query: 4 RCLKTLYAHHHFAT--SLDFHRSLPYVISGSVDQTVKVWECR*KHC 135
RC++T H ++ S F ++ Y+++ +D VK+WE C
Sbjct: 292 RCVETFKRAHDGSSICSAKFTKNGKYILTSGMDSIVKLWELSTNRC 337
>AF016428-6|AAK71396.2| 1733|Caenorhabditis elegans Hypothetical
protein T05C3.2 protein.
Length = 1733
Score = 29.5 bits (63), Expect = 1.4
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +1
Query: 1 TRCLKTLYAHHHFATSLDF--HRSLPYVISGSVDQTVKVW 114
T L++L AH +LD H+ +IS S+D T+K+W
Sbjct: 1324 TELLRSLDAHFGRILNLDSVSHQGQNILISSSLDHTIKIW 1363
>AL110500-12|CAB60432.1| 362|Caenorhabditis elegans Hypothetical
protein Y87G2A.11 protein.
Length = 362
Score = 28.7 bits (61), Expect = 2.5
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 10 LKTLYAHHHFATSLDFHRSLPYVISGSVDQ-TVKVWECR 123
LK AH H S+DF+ +L +VI+ D V++W+ R
Sbjct: 201 LKIRDAHIHRTISMDFNPNLQHVIATCGDDGYVRIWDTR 239
>Z79639-1|CAB01916.1| 2948|Caenorhabditis elegans Hypothetical protein
F54E4.1 protein.
Length = 2948
Score = 28.3 bits (60), Expect = 3.3
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +1
Query: 49 LDFHRSLPYVISGSVDQTVKVWE 117
+D H P+ ++GS D ++KVW+
Sbjct: 2674 IDSHPHAPFYVTGSSDGSIKVWK 2696
>AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical
protein W07E6.2 protein.
Length = 473
Score = 28.3 bits (60), Expect = 3.3
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 1 TRCLKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWE 117
TRC ++ H S F + SGS DQT+++W+
Sbjct: 95 TRCSASIPGHGEPVISAQFSPDGRGLASGSGDQTMRIWD 133
>Z83122-11|CAB05603.2| 648|Caenorhabditis elegans Hypothetical
protein F30F8.8 protein.
Length = 648
Score = 27.9 bits (59), Expect = 4.3
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +1
Query: 49 LDFHRSLPYVISGSVDQTVKVWE 117
+D+H + Y+ GS D+ V+VW+
Sbjct: 483 IDYHPNCNYIAGGSDDRYVRVWD 505
>Z81073-10|CAB03035.2| 648|Caenorhabditis elegans Hypothetical
protein F30F8.8 protein.
Length = 648
Score = 27.9 bits (59), Expect = 4.3
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +1
Query: 49 LDFHRSLPYVISGSVDQTVKVWE 117
+D+H + Y+ GS D+ V+VW+
Sbjct: 483 IDYHPNCNYIAGGSDDRYVRVWD 505
>AY572975-1|AAT77228.1| 580|Caenorhabditis elegans KQT-3 potassium
channel protein.
Length = 580
Score = 27.9 bits (59), Expect = 4.3
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +1
Query: 10 LKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWE--CR*KH 132
L T+ H HFA L + + V+ SV+ V++W CR K+
Sbjct: 55 LSTVEEHSHFAAELLYILEIVLVVFFSVEFIVRLWSAGCRSKY 97
>AL032648-2|CAA21699.2| 621|Caenorhabditis elegans Hypothetical
protein Y54G9A.3 protein.
Length = 621
Score = 27.9 bits (59), Expect = 4.3
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +1
Query: 10 LKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWE--CR*KH 132
L T+ H HFA L + + V+ SV+ V++W CR K+
Sbjct: 96 LSTVEEHSHFAAELLYILEIVLVVFFSVEFIVRLWSAGCRSKY 138
>AF047661-5|AAU05544.1| 822|Caenorhabditis elegans Hypothetical
protein M70.4 protein.
Length = 822
Score = 27.9 bits (59), Expect = 4.3
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +3
Query: 231 QFASNNIDLLSFIIVVYFVQLTMLCLYTHFHDLDLSGSN*ICNP 362
+ S+ ID L F YFV + YT F DL++ N NP
Sbjct: 388 EMGSSMIDRLKFRASWYFVGQKGIGAYTPFEDLNIPQGNNWANP 431
>U23177-2|AAA64331.2| 538|Caenorhabditis elegans Hypothetical
protein C56G2.4 protein.
Length = 538
Score = 27.5 bits (58), Expect = 5.7
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -1
Query: 450 LYTLRKQEQADNYLGSYCNGMCESMPK 370
L+ L Q + L SYC GMCE+ K
Sbjct: 414 LFVLLAQPASMQTLESYCEGMCETRKK 440
>Z80215-3|CAB02270.1| 496|Caenorhabditis elegans Hypothetical
protein C36B1.5 protein.
Length = 496
Score = 27.1 bits (57), Expect = 7.6
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +1
Query: 4 RCLKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWECR 123
RC+ L H S+++ + +I+GS D ++KVW+ R
Sbjct: 371 RCIMFLDGHTKEIHSVEWMPNGYEMITGSSDNSMKVWDLR 410
>U28730-7|AAA68258.2| 665|Caenorhabditis elegans Abnormal cell
lineage protein 23 protein.
Length = 665
Score = 27.1 bits (57), Expect = 7.6
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +1
Query: 7 CLKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWECR*KHC 135
C + L H L + + +ISGS D TV+VW+ C
Sbjct: 254 CSRILSGHTGSVLCLQYDNRV--IISGSSDATVRVWDVETGEC 294
Score = 27.1 bits (57), Expect = 7.6
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 10 LKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWE 117
++TL H L + L V+SGS D T+++W+
Sbjct: 378 VRTLAGHRRGIACLQYRGRL--VVSGSSDNTIRLWD 411
Score = 27.1 bits (57), Expect = 7.6
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +1
Query: 7 CLKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWE 117
CL+ L H + F ++SG+ D +KVW+
Sbjct: 417 CLRVLEGHEELVRCIRFDEKR--IVSGAYDGKIKVWD 451
Score = 26.6 bits (56), Expect = 10.0
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 13 KTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVW 114
+ L H +DF Y++S S D+T+KVW
Sbjct: 339 RVLVGHRAAVNVVDFDDR--YIVSASGDRTIKVW 370
>AF275253-1|AAG28037.1| 665|Caenorhabditis elegans LIN-23 protein.
Length = 665
Score = 27.1 bits (57), Expect = 7.6
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +1
Query: 7 CLKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWECR*KHC 135
C + L H L + + +ISGS D TV+VW+ C
Sbjct: 254 CSRILSGHTGSVLCLQYDNRV--IISGSSDATVRVWDVETGEC 294
Score = 27.1 bits (57), Expect = 7.6
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 10 LKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWE 117
++TL H L + L V+SGS D T+++W+
Sbjct: 378 VRTLAGHRRGIACLQYRGRL--VVSGSSDNTIRLWD 411
Score = 27.1 bits (57), Expect = 7.6
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +1
Query: 7 CLKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWE 117
CL+ L H + F ++SG+ D +KVW+
Sbjct: 417 CLRVLEGHEELVRCIRFDEKR--IVSGAYDGKIKVWD 451
Score = 26.6 bits (56), Expect = 10.0
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 13 KTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVW 114
+ L H +DF Y++S S D+T+KVW
Sbjct: 339 RVLVGHRAAVNVVDFDDR--YIVSASGDRTIKVW 370
>AF047651-2|AAL13318.1| 486|Caenorhabditis elegans Hypothetical
protein C05D2.10b protein.
Length = 486
Score = 27.1 bits (57), Expect = 7.6
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 28 HHHFATSLDFHRSLPYVISGSVDQTVKVWECR 123
H TS+ F+ ++S S D TVK+W+ R
Sbjct: 364 HQDSVTSVSFNTDYR-IVSSSDDATVKIWDLR 394
>AF047651-1|AAK67207.1| 484|Caenorhabditis elegans Hypothetical
protein C05D2.10a protein.
Length = 484
Score = 27.1 bits (57), Expect = 7.6
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 28 HHHFATSLDFHRSLPYVISGSVDQTVKVWECR 123
H TS+ F+ ++S S D TVK+W+ R
Sbjct: 362 HQDSVTSVSFNTDYR-IVSSSDDATVKIWDLR 392
>U23449-4|AAC24299.2| 534|Caenorhabditis elegans Hypothetical
protein K06A1.5 protein.
Length = 534
Score = 26.6 bits (56), Expect = 10.0
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +1
Query: 4 RCLKTLYAHHHFATSLDFHRSLPYVISGSVDQTVKVWE 117
R L T H +S +S VISGS D+T+K W+
Sbjct: 323 RLLSTFSGHTDKVSSARLFQS-HNVISGSADRTIKNWD 359
>U21321-1|AAG00051.1| 507|Caenorhabditis elegans Fizzy (cdc20
protein family) homologprotein 1 protein.
Length = 507
Score = 26.6 bits (56), Expect = 10.0
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 28 HHHFATSLDFHRSLPYVISGSVDQTVKVWECR 123
H T+L++ +SGS D+T K+W+ R
Sbjct: 314 HCRDVTALEWSADENMCVSGSSDRTAKIWDGR 345
>AL132904-21|CAE54912.1| 133|Caenorhabditis elegans Hypothetical
protein Y111B2A.28 protein.
Length = 133
Score = 26.6 bits (56), Expect = 10.0
Identities = 8/18 (44%), Positives = 15/18 (83%)
Frame = +1
Query: 70 PYVISGSVDQTVKVWECR 123
PYV +GS+D T+++++ R
Sbjct: 73 PYVTAGSIDGTIRIFDAR 90
>AF045642-2|AAC02580.1| 643|Caenorhabditis elegans Dynein chain,
light intermediateprotein 1 protein.
Length = 643
Score = 26.6 bits (56), Expect = 10.0
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 6/56 (10%)
Frame = +1
Query: 28 HHHFATSLDFHRSLPYV------ISGSVDQTVKVWECR*KHCHFSNLNSPMISLSL 177
H T ++FHR+ V IS S D TVK+W + + FS + P + L +
Sbjct: 482 HSGTLTGIEFHRASGVVDFSHLFISSSHDWTVKLWSTKDANLKFSFESHPDLVLDV 537
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,160,877
Number of Sequences: 27780
Number of extensions: 220520
Number of successful extensions: 648
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 647
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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