Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20572
         (677 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.       46   1e-06
AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsiv...    33   0.011
AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsiv...    31   0.025
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    25   2.9  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    23   8.9  
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    23   8.9  

>AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.
          Length = 525

 Score = 46.0 bits (104), Expect = 1e-06
 Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
 Frame = +1

Query: 247 CPAKKLVVGVAMYGRGWTGVHDYNDDIPFTGVANGPV-KGTWQDGVVDYREIVNGITSGT 423
           C  +KLV+G+ +YGR +T     N  I    V  G V + T + GV+ Y E    + +  
Sbjct: 267 CTGRKLVLGIPLYGRNFTLASAANTQIGAPTVGGGTVGRYTREPGVMGYNEFCEKLATEA 326

Query: 424 WQYFYDKVAQAPYVWNPTTGDLVTYDD 504
           W   + +  Q PY         V YDD
Sbjct: 327 WDLRWSEEQQVPYA--VRNNQWVGYDD 351



 Score = 25.4 bits (53), Expect = 1.7
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +3

Query: 507 KSVIEKGKYVRNNKLGGLFAWEIDADN 587
           +SV  K KY+ +  LGG   W ++ D+
Sbjct: 353 RSVQLKVKYLLDQGLGGAMVWSLETDD 379


>AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsive
           protein 1 protein.
          Length = 447

 Score = 32.7 bits (71), Expect = 0.011
 Identities = 18/38 (47%), Positives = 20/38 (52%)
 Frame = +1

Query: 250 PAKKLVVGVAMYGRGWTGVHDYNDDIPFTGVANGPVKG 363
           P  K+VVG+A YGRGW  V D       TGV   P  G
Sbjct: 296 PLDKIVVGIATYGRGWRLVGDSG----ITGVPPIPADG 329


>AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsive
           protein 2 protein.
          Length = 439

 Score = 31.5 bits (68), Expect = 0.025
 Identities = 17/43 (39%), Positives = 20/43 (46%)
 Frame = +1

Query: 250 PAKKLVVGVAMYGRGWTGVHDYNDDIPFTGVANGPVKGTWQDG 378
           PA KL+V +  +GRGW      N D   TGV   P  G    G
Sbjct: 288 PASKLIVSIPTFGRGW----KMNGDSGITGVPPLPADGPSNPG 326


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 10/17 (58%), Positives = 13/17 (76%), Gaps = 1/17 (5%)
 Frame = +1

Query: 148 RHSGTPDCSIC-SILES 195
           RH+ +PDC  C SI+ES
Sbjct: 901 RHASSPDCPACVSIVES 917


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -1

Query: 431 YCHVPEVMPFT 399
           YC+VPEV+P T
Sbjct: 830 YCNVPEVVPET 840


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -1

Query: 62  SCPNRRLWQRSTRKFYQS 9
           SCP+R LW+R+  +  +S
Sbjct: 437 SCPDRDLWKRAMEEEIKS 454


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 772,677
Number of Sequences: 2352
Number of extensions: 17086
Number of successful extensions: 31
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68159265
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)