Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20571
         (716 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q49Y29 Cluster: Putative uncharacterized protein; n=1; ...    38   0.19 
UniRef50_A0EGR1 Cluster: Chromosome undetermined scaffold_96, wh...    36   0.76 
UniRef50_A2D8S3 Cluster: Surface antigen BspA-like; n=4; Trichom...    36   1.00 
UniRef50_Q8MUN1 Cluster: Rhoptry-associated protein 3; n=2; Plas...    35   1.7  

>UniRef50_Q49Y29 Cluster: Putative uncharacterized protein; n=1;
           Staphylococcus saprophyticus subsp. saprophyticus ATCC
           15305|Rep: Putative uncharacterized protein -
           Staphylococcus saprophyticus subsp. saprophyticus
           (strain ATCC 15305 /DSM 20229)
          Length = 693

 Score = 38.3 bits (85), Expect = 0.19
 Identities = 23/65 (35%), Positives = 34/65 (52%)
 Frame = +3

Query: 351 GNYKFSGNTSTSMKL*HINYNTLKVYSIKSIGMNWMSL**TDKPYSFVRIFLRHD*SNNI 530
           G +KF+G    S KL +IN  +  + S KSI M WMSL    K Y + R+   H+     
Sbjct: 87  GAFKFNGE-GISRKL-YINIKSFDLSSCKSISMGWMSLVDLHKQYIYKRLVTEHNDDPGK 144

Query: 531 VICML 545
           +I ++
Sbjct: 145 IIALI 149


>UniRef50_A0EGR1 Cluster: Chromosome undetermined scaffold_96, whole
           genome shotgun sequence; n=3; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_96,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 494

 Score = 36.3 bits (80), Expect = 0.76
 Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 6/92 (6%)
 Frame = -3

Query: 591 RNLTKMFGVTLP--EEVEAYIL---LYYSIN-HVLKKSLQMSMVYRFIIVTSSSFRYF*C 430
           R +T +F +     EE++ YI    LYYS   H L K L +S   +   +  +S  Y   
Sbjct: 191 RKITILFNLDCASNEEIDNYIANANLYYSYTFHQLNKELDVSPYQQTENIDLTSLYY--- 247

Query: 429 YKL*GYCNLYVKVSLTYLYFPKIYSFPSSKYH 334
            K+  Y  +Y++ S +YL +   Y FP S  H
Sbjct: 248 -KVGKYIKIYLQYSQSYLEYNPFYFFPRSVQH 278


>UniRef50_A2D8S3 Cluster: Surface antigen BspA-like; n=4; Trichomonas
            vaginalis G3|Rep: Surface antigen BspA-like - Trichomonas
            vaginalis G3
          Length = 1474

 Score = 35.9 bits (79), Expect = 1.00
 Identities = 23/60 (38%), Positives = 34/60 (56%)
 Frame = +3

Query: 261  GRYQVSQFLAY*SGNKNIKLFTFLCGIYSMGNYKFSGNTSTSMKL*HINYNTLKVYSIKS 440
            G Y + Q+  Y   N N+ +  F  G+YS+G Y FS NT+    L H+N+N   ++SI S
Sbjct: 1365 GLYSIDQYAFY---NSNVTVVNFNNGLYSIGQYAFS-NTN----LTHVNFNE-SLHSIDS 1415


>UniRef50_Q8MUN1 Cluster: Rhoptry-associated protein 3; n=2;
           Plasmodium falciparum|Rep: Rhoptry-associated protein 3
           - Plasmodium falciparum
          Length = 400

 Score = 35.1 bits (77), Expect = 1.7
 Identities = 21/91 (23%), Positives = 40/91 (43%)
 Frame = -1

Query: 422 FKGIVIYMLKFH*RTCISRKFIVSHRVNTTKKCK*FNVFVSTSIRKKLRNLVPTYV*LFN 243
           F  +   M+K H R  +   + V +R     K K F        RK L+N V  Y+ L +
Sbjct: 298 FSDMKAKMVKGHKRFLMEFDYAVKNRTYALPKVKGFRFLKQLFQRKNLKNFVGMYINLLS 357

Query: 242 MNN*FVTKTSCQVFSVSISCHCQGNVRQRVD 150
               F+ +   ++F  +++C+ + +  +  D
Sbjct: 358 TEIDFLAEDFVEMFDTTMNCYGRQHAARAAD 388


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 631,811,908
Number of Sequences: 1657284
Number of extensions: 11810849
Number of successful extensions: 20892
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20327
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20888
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57851245060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)