Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20570
(724 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66564-5|CAC42300.2| 198|Caenorhabditis elegans Hypothetical pr... 152 3e-37
Z66564-2|CAA91474.1| 248|Caenorhabditis elegans Hypothetical pr... 152 3e-37
Z73910-2|CAA98138.1| 248|Caenorhabditis elegans Hypothetical pr... 143 1e-34
U05038-1|AAA61872.1| 248|Caenorhabditis elegans 14-3-3 protein ... 142 3e-34
Z73910-3|CAA98135.1| 125|Caenorhabditis elegans Hypothetical pr... 66 3e-11
U80437-19|AAB37630.2| 580|Caenorhabditis elegans Conserved olig... 28 5.9
AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical... 28 5.9
AF068711-1|AAC17775.2| 1121|Caenorhabditis elegans Hypothetical ... 28 5.9
Z47357-2|CAD54175.1| 464|Caenorhabditis elegans Hypothetical pr... 28 7.8
AC084155-9|AAO25978.1| 423|Caenorhabditis elegans Hypothetical ... 28 7.8
AC084155-8|AAG23358.2| 499|Caenorhabditis elegans Hypothetical ... 28 7.8
>Z66564-5|CAC42300.2| 198|Caenorhabditis elegans Hypothetical
protein F52D10.3b protein.
Length = 198
Score = 152 bits (368), Expect = 3e-37
Identities = 75/84 (89%), Positives = 77/84 (91%)
Frame = +1
Query: 256 ERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLG 435
ERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSE+KQQMAKEYR KVEKELR+IC DVL
Sbjct: 42 ERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSEKKQQMAKEYREKVEKELRDICQDVLN 101
Query: 436 LLDKHLIPKASNPESKVFYLKMKG 507
LLDK LIPKA ESKVFYLKMKG
Sbjct: 102 LLDKFLIPKAGAAESKVFYLKMKG 125
Score = 126 bits (305), Expect = 1e-29
Identities = 57/70 (81%), Positives = 67/70 (95%)
Frame = +3
Query: 510 YYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILNS 689
YYRYLAEVA+G+ R+SVVE SQ++YQ+AF+I+K KMQPTHPIRLGLALNFSVF+YEILN+
Sbjct: 127 YYRYLAEVASGDDRNSVVEKSQQSYQEAFDIAKDKMQPTHPIRLGLALNFSVFFYEILNA 186
Query: 690 PDKACQLAKQ 719
PDKACQLAKQ
Sbjct: 187 PDKACQLAKQ 196
Score = 66.9 bits (156), Expect = 1e-11
Identities = 33/40 (82%), Positives = 35/40 (87%)
Frame = +2
Query: 134 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSN 253
MS KEELV RAKLAEQAERYDDMAA+MK+VTE G ELSN
Sbjct: 1 MSDGKEELVNRAKLAEQAERYDDMAASMKKVTELGAELSN 40
>Z66564-2|CAA91474.1| 248|Caenorhabditis elegans Hypothetical
protein F52D10.3a protein.
Length = 248
Score = 152 bits (368), Expect = 3e-37
Identities = 75/84 (89%), Positives = 77/84 (91%)
Frame = +1
Query: 256 ERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLG 435
ERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSE+KQQMAKEYR KVEKELR+IC DVL
Sbjct: 42 ERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSEKKQQMAKEYREKVEKELRDICQDVLN 101
Query: 436 LLDKHLIPKASNPESKVFYLKMKG 507
LLDK LIPKA ESKVFYLKMKG
Sbjct: 102 LLDKFLIPKAGAAESKVFYLKMKG 125
Score = 128 bits (309), Expect = 4e-30
Identities = 58/71 (81%), Positives = 68/71 (95%)
Frame = +3
Query: 510 YYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILNS 689
YYRYLAEVA+G+ R+SVVE SQ++YQ+AF+I+K KMQPTHPIRLGLALNFSVF+YEILN+
Sbjct: 127 YYRYLAEVASGDDRNSVVEKSQQSYQEAFDIAKDKMQPTHPIRLGLALNFSVFFYEILNA 186
Query: 690 PDKACQLAKQA 722
PDKACQLAKQA
Sbjct: 187 PDKACQLAKQA 197
Score = 66.9 bits (156), Expect = 1e-11
Identities = 33/40 (82%), Positives = 35/40 (87%)
Frame = +2
Query: 134 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSN 253
MS KEELV RAKLAEQAERYDDMAA+MK+VTE G ELSN
Sbjct: 1 MSDGKEELVNRAKLAEQAERYDDMAASMKKVTELGAELSN 40
>Z73910-2|CAA98138.1| 248|Caenorhabditis elegans Hypothetical
protein M117.2 protein.
Length = 248
Score = 143 bits (347), Expect = 1e-34
Identities = 71/84 (84%), Positives = 76/84 (90%)
Frame = +1
Query: 256 ERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLG 435
ERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSE+KQQ+AKEYRVKVE+EL +IC DVL
Sbjct: 42 ERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSEKKQQLAKEYRVKVEQELNDICQDVLK 101
Query: 436 LLDKHLIPKASNPESKVFYLKMKG 507
LLD+ LI KA ESKVFYLKMKG
Sbjct: 102 LLDEFLIVKAGAAESKVFYLKMKG 125
Score = 118 bits (284), Expect = 4e-27
Identities = 57/71 (80%), Positives = 64/71 (90%)
Frame = +3
Query: 510 YYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILNS 689
YYRYLAEVA+ E R +VVE SQKAYQ+A +I+K KMQPTHPIRLGLALNFSVFYYEILN+
Sbjct: 127 YYRYLAEVAS-EDRAAVVEKSQKAYQEALDIAKDKMQPTHPIRLGLALNFSVFYYEILNT 185
Query: 690 PDKACQLAKQA 722
P+ ACQLAKQA
Sbjct: 186 PEHACQLAKQA 196
Score = 66.5 bits (155), Expect = 2e-11
Identities = 34/40 (85%), Positives = 35/40 (87%)
Frame = +2
Query: 134 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSN 253
MS EELVQRAKLAEQAERYDDMAAAMK+VTE G ELSN
Sbjct: 1 MSDTVEELVQRAKLAEQAERYDDMAAAMKKVTEQGQELSN 40
>U05038-1|AAA61872.1| 248|Caenorhabditis elegans 14-3-3 protein
protein.
Length = 248
Score = 142 bits (343), Expect = 3e-34
Identities = 70/84 (83%), Positives = 75/84 (89%)
Frame = +1
Query: 256 ERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELREICYDVLG 435
ERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSE+KQQ+AKEYRVKVE+EL +IC DVL
Sbjct: 42 ERNLLSVAYKNVVGARRSSWRVISSIEQKTEGSEKKQQLAKEYRVKVEQELNDICQDVLK 101
Query: 436 LLDKHLIPKASNPESKVFYLKMKG 507
LLD+ LI KA ESK FYLKMKG
Sbjct: 102 LLDEFLIVKAGAAESKAFYLKMKG 125
Score = 118 bits (284), Expect = 4e-27
Identities = 57/71 (80%), Positives = 64/71 (90%)
Frame = +3
Query: 510 YYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILNS 689
YYRYLAEVA+ E R +VVE SQKAYQ+A +I+K KMQPTHPIRLGLALNFSVFYYEILN+
Sbjct: 127 YYRYLAEVAS-EDRAAVVEKSQKAYQEALDIAKDKMQPTHPIRLGLALNFSVFYYEILNT 185
Query: 690 PDKACQLAKQA 722
P+ ACQLAKQA
Sbjct: 186 PEHACQLAKQA 196
Score = 66.5 bits (155), Expect = 2e-11
Identities = 34/40 (85%), Positives = 35/40 (87%)
Frame = +2
Query: 134 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSN 253
MS EELVQRAKLAEQAERYDDMAAAMK+VTE G ELSN
Sbjct: 1 MSDTVEELVQRAKLAEQAERYDDMAAAMKKVTEQGQELSN 40
>Z73910-3|CAA98135.1| 125|Caenorhabditis elegans Hypothetical
protein M117.3 protein.
Length = 125
Score = 65.7 bits (153), Expect = 3e-11
Identities = 33/71 (46%), Positives = 46/71 (64%)
Frame = +3
Query: 510 YYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILNS 689
++RYL + R S+ AYQ+A I+K KMQPTHPIRLGLALN S +++LN
Sbjct: 5 HFRYLVQY-DDINREEHAHKSRIAYQEALGIAKDKMQPTHPIRLGLALNASALNFDVLNL 63
Query: 690 PDKACQLAKQA 722
P +A ++A+ A
Sbjct: 64 PKEANEIAQSA 74
>U80437-19|AAB37630.2| 580|Caenorhabditis elegans Conserved
oligomeric golgi (cog)component protein 5 protein.
Length = 580
Score = 28.3 bits (60), Expect = 5.9
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = +2
Query: 113 SPLPSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNG 256
SP +S E V++ AE A+ D A KE TE VEL NG
Sbjct: 156 SPSKASEKDAAVEVSVEKVD-AETAQESDSPQEAEKEKTEPQVELENG 202
>AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical
protein Y111B2A.14 protein.
Length = 1481
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/47 (31%), Positives = 29/47 (61%)
Frame = +1
Query: 277 AYKNVVGARRSSWRVISSIEQKTEGSERKQQMAKEYRVKVEKELREI 417
A K+ + A++ R+ ++K E ERK++ +E + + E+E+REI
Sbjct: 984 AEKDRIEAKKFEERMKKE-QEKQEEKERKEREKREEKERKEREIREI 1029
>AF068711-1|AAC17775.2| 1121|Caenorhabditis elegans Hypothetical
protein R09A1.1 protein.
Length = 1121
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = -1
Query: 157 QFFLVDGHRGRWKRTNSLMP-ELLKPAVLECKHYFFFISNHL 35
QFFL D +G + +++P L++ AV K+Y FF+S +
Sbjct: 975 QFFLEDPSQGYESQGYNVLPGTLIEDAVTTNKYYDFFLSTQI 1016
>Z47357-2|CAD54175.1| 464|Caenorhabditis elegans Hypothetical
protein ZK1128.2b protein.
Length = 464
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +1
Query: 283 KNVVGARRSSWRVISSIEQKTEGSERKQQMAKE 381
KNV+GAR+ +W+ I+ T+G E+ ++A E
Sbjct: 100 KNVIGARQFNWKFIA-----TDGDEKSVRVAHE 127
>AC084155-9|AAO25978.1| 423|Caenorhabditis elegans Hypothetical
protein Y45G5AM.9b protein.
Length = 423
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = -2
Query: 252 LLSSTPVSVTSFIAAAMSSYRSACSANLARCTSSSLSTDIVD 127
LL TP+ T+ ++ SS+ S+ +A + +SSS + ++D
Sbjct: 330 LLLPTPIQATTTSSSTESSHDSSATATNPKTSSSSPPSSVID 371
>AC084155-8|AAG23358.2| 499|Caenorhabditis elegans Hypothetical
protein Y45G5AM.9a protein.
Length = 499
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = -2
Query: 252 LLSSTPVSVTSFIAAAMSSYRSACSANLARCTSSSLSTDIVD 127
LL TP+ T+ ++ SS+ S+ +A + +SSS + ++D
Sbjct: 330 LLLPTPIQATTTSSSTESSHDSSATATNPKTSSSSPPSSVID 371
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,101,151
Number of Sequences: 27780
Number of extensions: 357516
Number of successful extensions: 1065
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1011
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1063
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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