Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20568
         (722 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q2F5V8 Cluster: Stathmin; n=3; Endopterygota|Rep: Stath...    84   3e-15
UniRef50_UPI0000D5639F Cluster: PREDICTED: similar to CG31641-PC...    58   2e-07
UniRef50_Q8IPK0 Cluster: CG31641-PB, isoform B; n=10; Diptera|Re...    52   1e-05
UniRef50_Q4CWB9 Cluster: Putative uncharacterized protein; n=3; ...    38   0.19 
UniRef50_A5USK8 Cluster: Transposase, IS111A/IS1328/IS1533; n=38...    33   9.4  
UniRef50_Q5DHZ8 Cluster: SJCHGC05109 protein; n=1; Schistosoma j...    33   9.4  
UniRef50_A0BZW7 Cluster: Chromosome undetermined scaffold_14, wh...    33   9.4  

>UniRef50_Q2F5V8 Cluster: Stathmin; n=3; Endopterygota|Rep: Stathmin
           - Bombyx mori (Silk moth)
          Length = 291

 Score = 84.2 bits (199), Expect = 3e-15
 Identities = 41/41 (100%), Positives = 41/41 (100%)
 Frame = +1

Query: 1   NKLTTAELNREKEIQKKLDFVKKEERRAELVRQNKSARTET 123
           NKLTTAELNREKEIQKKLDFVKKEERRAELVRQNKSARTET
Sbjct: 244 NKLTTAELNREKEIQKKLDFVKKEERRAELVRQNKSARTET 284


>UniRef50_UPI0000D5639F Cluster: PREDICTED: similar to CG31641-PC,
           isoform C; n=1; Tribolium castaneum|Rep: PREDICTED:
           similar to CG31641-PC, isoform C - Tribolium castaneum
          Length = 352

 Score = 58.0 bits (134), Expect = 2e-07
 Identities = 26/36 (72%), Positives = 33/36 (91%)
 Frame = +1

Query: 1   NKLTTAELNREKEIQKKLDFVKKEERRAELVRQNKS 108
           +KLTTAELNREKE+Q+KL+ +KK E+RAE VRQNK+
Sbjct: 306 SKLTTAELNREKEMQRKLENIKKNEKRAETVRQNKA 341



 Score = 33.9 bits (74), Expect = 4.1
 Identities = 16/33 (48%), Positives = 21/33 (63%)
 Frame = +1

Query: 4   KLTTAELNREKEIQKKLDFVKKEERRAELVRQN 102
           KLT AE  RE+EIQ+KL+  KK       V+Q+
Sbjct: 256 KLTIAEQKREQEIQRKLEIAKKHNEHLMEVKQS 288


>UniRef50_Q8IPK0 Cluster: CG31641-PB, isoform B; n=10; Diptera|Rep:
           CG31641-PB, isoform B - Drosophila melanogaster (Fruit
           fly)
          Length = 302

 Score = 52.0 bits (119), Expect = 1e-05
 Identities = 25/36 (69%), Positives = 30/36 (83%)
 Frame = +1

Query: 1   NKLTTAELNREKEIQKKLDFVKKEERRAELVRQNKS 108
           NKL  AE  REKE+QKK++ V+K ERRAELVRQNK+
Sbjct: 251 NKLFAAEQKREKELQKKIEKVQKLERRAELVRQNKA 286


>UniRef50_Q4CWB9 Cluster: Putative uncharacterized protein; n=3;
           Trypanosoma cruzi|Rep: Putative uncharacterized protein
           - Trypanosoma cruzi
          Length = 258

 Score = 38.3 bits (85), Expect = 0.19
 Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
 Frame = +3

Query: 39  NTEETRFRQEGGATRRAGPAEQERPHRDRGPALLRLERGPPTH--ASHA-HVTTVRFDIC 209
           NT+E R R +GG+ R     +++R   DR  A+LR E   P      H  H+T  + D+C
Sbjct: 101 NTKEKR-RLQGGSPRSHEREKEQRAAMDREQAILRYELSIPRRRVVDHLLHLTASQLDLC 159

Query: 210 HT-PT 221
           HT PT
Sbjct: 160 HTMPT 164


>UniRef50_A5USK8 Cluster: Transposase, IS111A/IS1328/IS1533; n=38;
           Roseiflexus sp. RS-1|Rep: Transposase,
           IS111A/IS1328/IS1533 - Roseiflexus sp. RS-1
          Length = 320

 Score = 32.7 bits (71), Expect = 9.4
 Identities = 16/40 (40%), Positives = 24/40 (60%)
 Frame = +1

Query: 1   NKLTTAELNREKEIQKKLDFVKKEERRAELVRQNKSARTE 120
           N+LT A  N    IQK +D++ +E R  E  R N++ RT+
Sbjct: 148 NRLTAAAPNLRPGIQKHIDWLDQEIRALEQERDNEAERTD 187


>UniRef50_Q5DHZ8 Cluster: SJCHGC05109 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC05109 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 143

 Score = 32.7 bits (71), Expect = 9.4
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = +3

Query: 564 LSMLNKEYYLVMLLGHSFMKYNKYIIVCASMIEWIIFIYN*EILNS 701
           L  +N   +LV L+G+  M YNK I+ C   +   + +YN  + N+
Sbjct: 90  LRQMNINIFLVFLVGYLRMNYNKKIVCCFIYLYLRVCVYNFSLHNT 135


>UniRef50_A0BZW7 Cluster: Chromosome undetermined scaffold_14, whole
           genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_14,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 343

 Score = 32.7 bits (71), Expect = 9.4
 Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
 Frame = +3

Query: 537 YLHVKRAKS-LSMLNKEYYLVMLLGHSFMKYNKYIIVC--ASMIEWIIFIYN 683
           Y  +KR KS   +LNK+  + ++   + + Y   I +C   S I ++IF++N
Sbjct: 199 YFKIKRIKSQYELLNKQINIQLMFARNLILYPSVIFICWLPSQIIFLIFVFN 250


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 576,798,288
Number of Sequences: 1657284
Number of extensions: 9995138
Number of successful extensions: 28707
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 27527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28685
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 58677691418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)