Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20568
         (722 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L03426-1|AAA61304.1|  695|Homo sapiens XE7 protein.                    31   3.2  
BC110497-1|AAI10498.1|  695|Homo sapiens splicing factor, argini...    31   3.2  
BC110496-1|AAI10497.1|  695|Homo sapiens splicing factor, argini...    31   3.2  
AL683807-2|CAI41501.1|  695|Homo sapiens chromosome X and Y open...    31   3.2  
X79981-1|CAA56306.1|  784|Homo sapiens VE-cadherin protein.            31   4.2  
X59796-1|CAA42468.1|  780|Homo sapiens cadherin-5 protein.             31   4.2  
U84722-1|AAB41796.1|  784|Homo sapiens vascular endothelial cadh...    31   4.2  
BC117520-1|AAI17521.1|  669|Homo sapiens CDH5 protein protein.         31   4.2  
BC096365-1|AAH96365.1|  662|Homo sapiens CDH5 protein protein.         31   4.2  
BC096364-1|AAH96364.3|  669|Homo sapiens CDH5 protein protein.         31   4.2  
BC096363-1|AAH96363.1|  669|Homo sapiens CDH5 protein protein.         31   4.2  
AB209908-1|BAD93145.1|  807|Homo sapiens cadherin 5, type 2 prep...    31   4.2  
AB035304-1|BAA87418.1|  784|Homo sapiens cadherin-5 protein.           31   4.2  
DQ080434-1|AAZ39562.1|  153|Homo sapiens Bcl-2-like protein prot...    30   9.6  
BC032818-1|AAH32818.1|  153|Homo sapiens chromosome 20 open read...    30   9.6  
AL121906-1|CAC34270.1|  153|Homo sapiens chromosome 20 open read...    30   9.6  

>L03426-1|AAA61304.1|  695|Homo sapiens XE7 protein.
          Length = 695

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 6/49 (12%)
 Frame = +3

Query: 3   QTDHCRAEPGKGNTEET------RFRQEGGATRRAGPAEQERPHRDRGP 131
           + D C  EP KG    T      R ++E    RRA   E  RP ++R P
Sbjct: 575 EQDKCNREPSKGRGRATGDGLADRHKRERSRARRASSREDGRPRKERRP 623


>BC110497-1|AAI10498.1|  695|Homo sapiens splicing factor,
           arginine/serine-rich 17A protein.
          Length = 695

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 6/49 (12%)
 Frame = +3

Query: 3   QTDHCRAEPGKGNTEET------RFRQEGGATRRAGPAEQERPHRDRGP 131
           + D C  EP KG    T      R ++E    RRA   E  RP ++R P
Sbjct: 575 EQDKCNREPSKGRGRATGDGLADRHKRERSRARRASSREDGRPRKERRP 623


>BC110496-1|AAI10497.1|  695|Homo sapiens splicing factor,
           arginine/serine-rich 17A protein.
          Length = 695

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 6/49 (12%)
 Frame = +3

Query: 3   QTDHCRAEPGKGNTEET------RFRQEGGATRRAGPAEQERPHRDRGP 131
           + D C  EP KG    T      R ++E    RRA   E  RP ++R P
Sbjct: 575 EQDKCNREPSKGRGRATGDGLADRHKRERSRARRASSREDGRPRKERRP 623


>AL683807-2|CAI41501.1|  695|Homo sapiens chromosome X and Y open
           reading frame 3 protein.
          Length = 695

 Score = 31.5 bits (68), Expect = 3.2
 Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 6/49 (12%)
 Frame = +3

Query: 3   QTDHCRAEPGKGNTEET------RFRQEGGATRRAGPAEQERPHRDRGP 131
           + D C  EP KG    T      R ++E    RRA   E  RP ++R P
Sbjct: 575 EQDKCNREPSKGRGRATGDGLADRHKRERSRARRASSREDGRPRKERRP 623


>X79981-1|CAA56306.1|  784|Homo sapiens VE-cadherin protein.
          Length = 784

 Score = 31.1 bits (67), Expect = 4.2
 Identities = 18/53 (33%), Positives = 24/53 (45%)
 Frame = +3

Query: 24  EPGKGNTEETRFRQEGGATRRAGPAEQERPHRDRGPALLRLERGPPTHASHAH 182
           E G G  + T +      + R G A+  RP  D  P+L    + PP HA  AH
Sbjct: 647 EEGGGEMDTTSYDVSVLNSVRRGGAKPPRPALDARPSLYAQVQKPPRHAPGAH 699


>X59796-1|CAA42468.1|  780|Homo sapiens cadherin-5 protein.
          Length = 780

 Score = 31.1 bits (67), Expect = 4.2
 Identities = 18/53 (33%), Positives = 24/53 (45%)
 Frame = +3

Query: 24  EPGKGNTEETRFRQEGGATRRAGPAEQERPHRDRGPALLRLERGPPTHASHAH 182
           E G G  + T +      + R G A+  RP  D  P+L    + PP HA  AH
Sbjct: 643 EEGGGEMDTTSYDVSVLNSVRRGGAKPPRPALDARPSLYAQVQKPPRHAPGAH 695


>U84722-1|AAB41796.1|  784|Homo sapiens vascular endothelial
           cadherin protein.
          Length = 784

 Score = 31.1 bits (67), Expect = 4.2
 Identities = 18/53 (33%), Positives = 24/53 (45%)
 Frame = +3

Query: 24  EPGKGNTEETRFRQEGGATRRAGPAEQERPHRDRGPALLRLERGPPTHASHAH 182
           E G G  + T +      + R G A+  RP  D  P+L    + PP HA  AH
Sbjct: 647 EEGGGEMDTTSYDVSVLNSVRRGGAKPPRPALDARPSLYAQVQKPPRHAPGAH 699


>BC117520-1|AAI17521.1|  669|Homo sapiens CDH5 protein protein.
          Length = 669

 Score = 31.1 bits (67), Expect = 4.2
 Identities = 18/53 (33%), Positives = 24/53 (45%)
 Frame = +3

Query: 24  EPGKGNTEETRFRQEGGATRRAGPAEQERPHRDRGPALLRLERGPPTHASHAH 182
           E G G  + T +      + R G A+  RP  D  P+L    + PP HA  AH
Sbjct: 532 EEGGGEMDTTSYDVSVLNSVRRGGAKPPRPALDARPSLYAQVQKPPRHAPGAH 584


>BC096365-1|AAH96365.1|  662|Homo sapiens CDH5 protein protein.
          Length = 662

 Score = 31.1 bits (67), Expect = 4.2
 Identities = 18/53 (33%), Positives = 24/53 (45%)
 Frame = +3

Query: 24  EPGKGNTEETRFRQEGGATRRAGPAEQERPHRDRGPALLRLERGPPTHASHAH 182
           E G G  + T +      + R G A+  RP  D  P+L    + PP HA  AH
Sbjct: 525 EEGGGEMDTTSYDVSVLNSVRRGGAKPPRPALDARPSLYAQVQKPPRHAPGAH 577


>BC096364-1|AAH96364.3|  669|Homo sapiens CDH5 protein protein.
          Length = 669

 Score = 31.1 bits (67), Expect = 4.2
 Identities = 18/53 (33%), Positives = 24/53 (45%)
 Frame = +3

Query: 24  EPGKGNTEETRFRQEGGATRRAGPAEQERPHRDRGPALLRLERGPPTHASHAH 182
           E G G  + T +      + R G A+  RP  D  P+L    + PP HA  AH
Sbjct: 532 EEGGGEMDTTSYDVSVLNSVRRGGAKPPRPALDARPSLYAQVQKPPRHAPGAH 584


>BC096363-1|AAH96363.1|  669|Homo sapiens CDH5 protein protein.
          Length = 669

 Score = 31.1 bits (67), Expect = 4.2
 Identities = 18/53 (33%), Positives = 24/53 (45%)
 Frame = +3

Query: 24  EPGKGNTEETRFRQEGGATRRAGPAEQERPHRDRGPALLRLERGPPTHASHAH 182
           E G G  + T +      + R G A+  RP  D  P+L    + PP HA  AH
Sbjct: 532 EEGGGEMDTTSYDVSVLNSVRRGGAKPPRPALDARPSLYAQVQKPPRHAPGAH 584


>AB209908-1|BAD93145.1|  807|Homo sapiens cadherin 5, type 2
           preproprotein variant protein.
          Length = 807

 Score = 31.1 bits (67), Expect = 4.2
 Identities = 18/53 (33%), Positives = 24/53 (45%)
 Frame = +3

Query: 24  EPGKGNTEETRFRQEGGATRRAGPAEQERPHRDRGPALLRLERGPPTHASHAH 182
           E G G  + T +      + R G A+  RP  D  P+L    + PP HA  AH
Sbjct: 670 EEGGGEMDTTSYDVSVLNSVRRGGAKPPRPALDARPSLYAQVQKPPRHAPGAH 722


>AB035304-1|BAA87418.1|  784|Homo sapiens cadherin-5 protein.
          Length = 784

 Score = 31.1 bits (67), Expect = 4.2
 Identities = 18/53 (33%), Positives = 24/53 (45%)
 Frame = +3

Query: 24  EPGKGNTEETRFRQEGGATRRAGPAEQERPHRDRGPALLRLERGPPTHASHAH 182
           E G G  + T +      + R G A+  RP  D  P+L    + PP HA  AH
Sbjct: 647 EEGGGEMDTTSYDVSVLNSVRRGGAKPPRPALDARPSLYAQVQKPPRHAPGAH 699


>DQ080434-1|AAZ39562.1|  153|Homo sapiens Bcl-2-like protein
           protein.
          Length = 153

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = +3

Query: 51  TRFRQEGGATRRAGPAEQERPHRDRGP 131
           +RFR  G A R AGPAE++   R R P
Sbjct: 123 SRFRSPGKAPREAGPAEEQPRKRCRCP 149


>BC032818-1|AAH32818.1|  153|Homo sapiens chromosome 20 open reading
           frame 144 protein.
          Length = 153

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = +3

Query: 51  TRFRQEGGATRRAGPAEQERPHRDRGP 131
           +RFR  G A R AGPAE++   R R P
Sbjct: 123 SRFRSPGKAPREAGPAEEQPRKRCRCP 149


>AL121906-1|CAC34270.1|  153|Homo sapiens chromosome 20 open reading
           frame 144 protein.
          Length = 153

 Score = 29.9 bits (64), Expect = 9.6
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = +3

Query: 51  TRFRQEGGATRRAGPAEQERPHRDRGP 131
           +RFR  G A R AGPAE++   R R P
Sbjct: 123 SRFRSPGKAPREAGPAEEQPRKRCRCP 149


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,816,818
Number of Sequences: 237096
Number of extensions: 1475255
Number of successful extensions: 3679
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3678
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8511181328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)