Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20568
(722 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT001751-1|AAN71506.1| 257|Drosophila melanogaster RH02809p pro... 52 8e-07
AF202990-1|AAG35633.1| 254|Drosophila melanogaster STATHMIN-19 ... 52 8e-07
AF202774-1|AAG35628.1| 257|Drosophila melanogaster stathmin-14 ... 52 8e-07
AE014134-1053|AAN10581.1| 302|Drosophila melanogaster CG31641-P... 52 8e-07
AE014134-1052|AAN10580.1| 257|Drosophila melanogaster CG31641-P... 52 8e-07
AY061071-1|AAL28619.1| 250|Drosophila melanogaster LD04103p pro... 42 0.001
AE014134-1054|AAF52345.2| 250|Drosophila melanogaster CG31641-P... 42 0.001
AE014297-464|AAN13379.1| 1848|Drosophila melanogaster CG10272-PD... 31 2.1
AE014297-463|AAN13378.1| 1848|Drosophila melanogaster CG10272-PB... 31 2.1
AE014297-462|AAF54122.2| 1848|Drosophila melanogaster CG10272-PA... 31 2.1
AF202773-1|AAG35627.1| 234|Drosophila melanogaster stathmin-1 p... 29 8.5
AE013599-322|AAF59277.1| 681|Drosophila melanogaster CG1850-PA ... 29 8.5
>BT001751-1|AAN71506.1| 257|Drosophila melanogaster RH02809p
protein.
Length = 257
Score = 52.0 bits (119), Expect = 8e-07
Identities = 25/36 (69%), Positives = 30/36 (83%)
Frame = +1
Query: 1 NKLTTAELNREKEIQKKLDFVKKEERRAELVRQNKS 108
NKL AE REKE+QKK++ V+K ERRAELVRQNK+
Sbjct: 206 NKLFAAEQKREKELQKKIEKVQKLERRAELVRQNKA 241
>AF202990-1|AAG35633.1| 254|Drosophila melanogaster STATHMIN-19
protein.
Length = 254
Score = 52.0 bits (119), Expect = 8e-07
Identities = 25/36 (69%), Positives = 30/36 (83%)
Frame = +1
Query: 1 NKLTTAELNREKEIQKKLDFVKKEERRAELVRQNKS 108
NKL AE REKE+QKK++ V+K ERRAELVRQNK+
Sbjct: 203 NKLFAAEQKREKELQKKIEKVQKLERRAELVRQNKA 238
>AF202774-1|AAG35628.1| 257|Drosophila melanogaster stathmin-14
protein.
Length = 257
Score = 52.0 bits (119), Expect = 8e-07
Identities = 25/36 (69%), Positives = 30/36 (83%)
Frame = +1
Query: 1 NKLTTAELNREKEIQKKLDFVKKEERRAELVRQNKS 108
NKL AE REKE+QKK++ V+K ERRAELVRQNK+
Sbjct: 206 NKLFAAEQKREKELQKKIEKVQKLERRAELVRQNKA 241
>AE014134-1053|AAN10581.1| 302|Drosophila melanogaster CG31641-PB,
isoform B protein.
Length = 302
Score = 52.0 bits (119), Expect = 8e-07
Identities = 25/36 (69%), Positives = 30/36 (83%)
Frame = +1
Query: 1 NKLTTAELNREKEIQKKLDFVKKEERRAELVRQNKS 108
NKL AE REKE+QKK++ V+K ERRAELVRQNK+
Sbjct: 251 NKLFAAEQKREKELQKKIEKVQKLERRAELVRQNKA 286
>AE014134-1052|AAN10580.1| 257|Drosophila melanogaster CG31641-PC,
isoform C protein.
Length = 257
Score = 52.0 bits (119), Expect = 8e-07
Identities = 25/36 (69%), Positives = 30/36 (83%)
Frame = +1
Query: 1 NKLTTAELNREKEIQKKLDFVKKEERRAELVRQNKS 108
NKL AE REKE+QKK++ V+K ERRAELVRQNK+
Sbjct: 206 NKLFAAEQKREKELQKKIEKVQKLERRAELVRQNKA 241
>AY061071-1|AAL28619.1| 250|Drosophila melanogaster LD04103p
protein.
Length = 250
Score = 41.5 bits (93), Expect = 0.001
Identities = 20/35 (57%), Positives = 27/35 (77%)
Frame = +1
Query: 4 KLTTAELNREKEIQKKLDFVKKEERRAELVRQNKS 108
KL A+ R++ I+K LD +K+ ERRAELVRQNK+
Sbjct: 200 KLKIAQSLRDENIKKMLDRLKEHERRAELVRQNKA 234
>AE014134-1054|AAF52345.2| 250|Drosophila melanogaster CG31641-PA,
isoform A protein.
Length = 250
Score = 41.5 bits (93), Expect = 0.001
Identities = 20/35 (57%), Positives = 27/35 (77%)
Frame = +1
Query: 4 KLTTAELNREKEIQKKLDFVKKEERRAELVRQNKS 108
KL A+ R++ I+K LD +K+ ERRAELVRQNK+
Sbjct: 200 KLKIAQSLRDENIKKMLDRLKEHERRAELVRQNKA 234
>AE014297-464|AAN13379.1| 1848|Drosophila melanogaster CG10272-PD,
isoform D protein.
Length = 1848
Score = 30.7 bits (66), Expect = 2.1
Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = +3
Query: 9 DHCRAEPGKGNTEETRFRQEGGATRRAG-PAEQERPHRDRGPALLRLERGPPTHASHAHV 185
DH RA K TEE + R A+ AG PA E P + PP H+ H H
Sbjct: 1567 DHVRARKYKEETEERQRRAAAAASSSAGPPAGMELPTH-------YAHQAPPAHSYHHHG 1619
Query: 186 TTV 194
++
Sbjct: 1620 ASI 1622
>AE014297-463|AAN13378.1| 1848|Drosophila melanogaster CG10272-PB,
isoform B protein.
Length = 1848
Score = 30.7 bits (66), Expect = 2.1
Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = +3
Query: 9 DHCRAEPGKGNTEETRFRQEGGATRRAG-PAEQERPHRDRGPALLRLERGPPTHASHAHV 185
DH RA K TEE + R A+ AG PA E P + PP H+ H H
Sbjct: 1567 DHVRARKYKEETEERQRRAAAAASSSAGPPAGMELPTH-------YAHQAPPAHSYHHHG 1619
Query: 186 TTV 194
++
Sbjct: 1620 ASI 1622
>AE014297-462|AAF54122.2| 1848|Drosophila melanogaster CG10272-PA,
isoform A protein.
Length = 1848
Score = 30.7 bits (66), Expect = 2.1
Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = +3
Query: 9 DHCRAEPGKGNTEETRFRQEGGATRRAG-PAEQERPHRDRGPALLRLERGPPTHASHAHV 185
DH RA K TEE + R A+ AG PA E P + PP H+ H H
Sbjct: 1567 DHVRARKYKEETEERQRRAAAAASSSAGPPAGMELPTH-------YAHQAPPAHSYHHHG 1619
Query: 186 TTV 194
++
Sbjct: 1620 ASI 1622
>AF202773-1|AAG35627.1| 234|Drosophila melanogaster stathmin-1
protein.
Length = 234
Score = 28.7 bits (61), Expect = 8.5
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +1
Query: 1 NKLTTAELNREKEIQKKL 54
NKL AE REKE+QKKL
Sbjct: 206 NKLFAAEQKREKELQKKL 223
>AE013599-322|AAF59277.1| 681|Drosophila melanogaster CG1850-PA
protein.
Length = 681
Score = 28.7 bits (61), Expect = 8.5
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +1
Query: 19 ELNREKEIQKKLDFVKKEERRAELVRQNKSAR 114
E +EKE ++L+ K+EE+ AE+ RQ ++ R
Sbjct: 458 EREQEKERLQELELRKQEEKEAEMERQKEADR 489
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,937,768
Number of Sequences: 53049
Number of extensions: 469449
Number of successful extensions: 1324
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1276
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1324
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3231892257
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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