Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20568
         (722 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81077-9|CAD56582.1|  565|Caenorhabditis elegans Hypothetical pr...    32   0.36 
Z81077-8|CAB03072.2|  528|Caenorhabditis elegans Hypothetical pr...    32   0.36 
AF024502-3|AAB70373.1|  836|Caenorhabditis elegans Hypothetical ...    29   3.4  
Z92825-1|CAB07313.1|  415|Caenorhabditis elegans Hypothetical pr...    29   4.4  

>Z81077-9|CAD56582.1|  565|Caenorhabditis elegans Hypothetical
           protein F36A2.9b protein.
          Length = 565

 Score = 32.3 bits (70), Expect = 0.36
 Identities = 15/29 (51%), Positives = 22/29 (75%)
 Frame = +1

Query: 34  KEIQKKLDFVKKEERRAELVRQNKSARTE 120
           +E QKKL+  +KEE++A L RQN  A++E
Sbjct: 505 EEPQKKLEEAQKEEQKALLTRQNTRAQSE 533


>Z81077-8|CAB03072.2|  528|Caenorhabditis elegans Hypothetical
           protein F36A2.9a protein.
          Length = 528

 Score = 32.3 bits (70), Expect = 0.36
 Identities = 15/29 (51%), Positives = 22/29 (75%)
 Frame = +1

Query: 34  KEIQKKLDFVKKEERRAELVRQNKSARTE 120
           +E QKKL+  +KEE++A L RQN  A++E
Sbjct: 468 EEPQKKLEEAQKEEQKALLTRQNTRAQSE 496


>AF024502-3|AAB70373.1|  836|Caenorhabditis elegans Hypothetical
           protein M151.3 protein.
          Length = 836

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +1

Query: 1   NKLTTAELNREKEIQKKLDFVKKEERRAELVRQNKSARTE 120
           N+LT   + + +E+QK +D  KKE RR +   + K  + E
Sbjct: 196 NELTLNAMKKNEELQKLIDSQKKESRRFQDSARIKKMKLE 235


>Z92825-1|CAB07313.1|  415|Caenorhabditis elegans Hypothetical
           protein C13C4.1 protein.
          Length = 415

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 13/61 (21%), Positives = 27/61 (44%)
 Frame = -1

Query: 557 CTFYMKILSHREYGDSQRSN*IIDVASCTATLRYARGDYYFYIEILRNVRGDDAECYRAV 378
           C F   +L H       R + ++ + +     +  + DYY YI+++ + +  D E  +  
Sbjct: 345 CLFRYCLLQHGTLHGPARFSALLSIFNVLENQQKEQKDYYLYIKLIHSQKHKDPEVLKKK 404

Query: 377 C 375
           C
Sbjct: 405 C 405


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,463,965
Number of Sequences: 27780
Number of extensions: 246918
Number of successful extensions: 712
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 712
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)