Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20567
(415 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VZS5 Cluster: 60S ribosomal protein L28; n=13; Endopt... 116 1e-25
UniRef50_A2I410 Cluster: Ribosomal protein L28-like protein; n=8... 97 1e-19
UniRef50_Q7PP83 Cluster: ENSANGP00000014265; n=1; Anopheles gamb... 89 4e-17
UniRef50_P46779 Cluster: 60S ribosomal protein L28; n=44; Coelom... 74 1e-12
UniRef50_A7RYT2 Cluster: Predicted protein; n=1; Nematostella ve... 72 4e-12
UniRef50_A6YMN6 Cluster: Large subunit ribosomal protein 28; n=1... 68 9e-11
UniRef50_Q09JQ7 Cluster: 60S ribosomal protein L28; n=3; Ixodoid... 67 2e-10
UniRef50_Q7Z0U0 Cluster: Ribosomal protein L28; n=2; Schistosoma... 66 2e-10
UniRef50_Q4KTF6 Cluster: L28; n=1; Suberites domuncula|Rep: L28 ... 66 3e-10
UniRef50_Q4P4F5 Cluster: Putative uncharacterized protein; n=1; ... 64 1e-09
UniRef50_Q2U9I8 Cluster: RIB40 genomic DNA, SC111; n=7; Pezizomy... 57 2e-07
UniRef50_Q4WDL9 Cluster: 60S ribosomal protein L28; n=8; Pezizom... 55 5e-07
UniRef50_O82204 Cluster: 60S ribosomal protein L28-1; n=17; Magn... 53 3e-06
UniRef50_O14069 Cluster: Probable 60S ribosomal protein L28e; n=... 49 4e-05
UniRef50_Q6C5X8 Cluster: Similarity; n=1; Yarrowia lipolytica|Re... 46 3e-04
UniRef50_Q2M3Y8 Cluster: Ribosomal protein L28; n=1; Phytophthor... 44 0.002
UniRef50_Q21930 Cluster: 60S ribosomal protein L28; n=2; Caenorh... 40 0.027
UniRef50_Q5CQC8 Cluster: 60S ribosomal protein L28; n=2; Cryptos... 39 0.035
UniRef50_A2U4J5 Cluster: Type III restriction enzyme, res subuni... 38 0.062
UniRef50_Q07HH4 Cluster: Putative uncharacterized protein; n=1; ... 33 3.1
UniRef50_A4S554 Cluster: Ribosomal protein L28, component of cyt... 33 3.1
UniRef50_UPI0000DB73A8 Cluster: PREDICTED: similar to Grunge CG6... 32 5.3
UniRef50_UPI00006CB1D5 Cluster: hypothetical protein TTHERM_0030... 32 5.3
UniRef50_Q4T6N5 Cluster: Chromosome 9 SCAF8684, whole genome sho... 32 5.3
UniRef50_Q8ILX0 Cluster: Putative uncharacterized protein; n=2; ... 31 7.1
UniRef50_Q54XH1 Cluster: Putative uncharacterized protein; n=1; ... 31 7.1
UniRef50_Q5KLF0 Cluster: 60s ribosomal protein, putative; n=1; F... 31 7.1
UniRef50_Q9GS21 Cluster: 60S ribosomal protein L28; n=2; Dictyos... 31 7.1
UniRef50_P19174 Cluster: 1-phosphatidylinositol-4,5-bisphosphate... 31 7.1
UniRef50_P03203 Cluster: Epstein-Barr nuclear antigen 4; n=6; Hu... 31 7.1
UniRef50_UPI0000E493A1 Cluster: PREDICTED: similar to phospholip... 31 9.3
UniRef50_Q4RJY4 Cluster: Chromosome 9 SCAF15033, whole genome sh... 31 9.3
UniRef50_Q8JKL3 Cluster: Orf100; n=1; Heliothis zea virus 1|Rep:... 31 9.3
UniRef50_A2A0G4 Cluster: Intein C-terminal splicing region domai... 31 9.3
UniRef50_Q7QSE5 Cluster: GLP_426_12155_12580; n=1; Giardia lambl... 31 9.3
>UniRef50_Q9VZS5 Cluster: 60S ribosomal protein L28; n=13;
Endopterygota|Rep: 60S ribosomal protein L28 -
Drosophila melanogaster (Fruit fly)
Length = 144
Score = 116 bits (280), Expect = 1e-25
Identities = 51/85 (60%), Positives = 68/85 (80%)
Frame = +2
Query: 2 NNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKGFTVVYKKAKAT 181
NNAFL+KKR++KKPFS EPNN+ ++ S+RY+G++HKK +GVV D+KGFT V KK K
Sbjct: 15 NNAFLLKKRDVKKPFSTEPNNLASVSSYRYSGIVHKKTLGVVPAADKKGFTAVLKKGKYA 74
Query: 182 RKPAKNLIRRPFKAGARRSLYKVKS 256
++PAKN +R FKAG RRSL K+K+
Sbjct: 75 QRPAKNTVRVDFKAGPRRSLKKLKN 99
Score = 39.1 bits (87), Expect = 0.035
Identities = 18/30 (60%), Positives = 23/30 (76%)
Frame = +1
Query: 250 EELLKANHYRTDLCKATLRRASAILRSQRP 339
+ LL + YR DL +A LRRASA+LRSQ+P
Sbjct: 98 KNLLIGSKYRKDLTQAALRRASAVLRSQKP 127
>UniRef50_A2I410 Cluster: Ribosomal protein L28-like protein; n=8;
Neoptera|Rep: Ribosomal protein L28-like protein -
Maconellicoccus hirsutus (hibiscus mealybug)
Length = 139
Score = 97.1 bits (231), Expect = 1e-19
Identities = 47/84 (55%), Positives = 57/84 (67%)
Frame = +2
Query: 2 NNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKGFTVVYKKAKAT 181
NNA+L+KKR+IKKPFS EP N+ N+ SFRYNGL+ K V V D KGF V K+AK
Sbjct: 13 NNAYLLKKRDIKKPFSTEPGNLKNVASFRYNGLVQPKTVDVRAAKDGKGFVVTTKRAKQQ 72
Query: 182 RKPAKNLIRRPFKAGARRSLYKVK 253
KP K+ I AG RRSLYK++
Sbjct: 73 NKPGKSNISVTMSAGPRRSLYKLR 96
>UniRef50_Q7PP83 Cluster: ENSANGP00000014265; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000014265 - Anopheles gambiae
str. PEST
Length = 158
Score = 88.6 bits (210), Expect = 4e-17
Identities = 40/83 (48%), Positives = 57/83 (68%)
Frame = +2
Query: 2 NNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKGFTVVYKKAKAT 181
+NAFL+K+R+I+KPFS EP N+TNL SFRY+GL+H K + + ++KG VY + K
Sbjct: 15 HNAFLLKRRDIRKPFSTEPGNLTNLSSFRYSGLVHHKTI-TITPAEKKGVNFVYNRKKVL 73
Query: 182 RKPAKNLIRRPFKAGARRSLYKV 250
KPAK ++ K G RR+L K+
Sbjct: 74 NKPAKAPVKVTLKEGPRRTLKKI 96
Score = 44.4 bits (100), Expect = 0.001
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = +1
Query: 256 LLKANHYRTDLCKATLRRASAILRSQRP 339
++KAN YR DL A LRRASAILRSQRP
Sbjct: 99 MMKANRYRADLRGAALRRASAILRSQRP 126
>UniRef50_P46779 Cluster: 60S ribosomal protein L28; n=44;
Coelomata|Rep: 60S ribosomal protein L28 - Homo sapiens
(Human)
Length = 137
Score = 73.7 bits (173), Expect = 1e-12
Identities = 36/83 (43%), Positives = 51/83 (61%)
Frame = +2
Query: 5 NAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKGFTVVYKKAKATR 184
++FL+K+ K+ +S EPNN+ +SFRYNGLIH+K VGV D KG VV K+ R
Sbjct: 14 SSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGKGVVVVIKRRSGQR 71
Query: 185 KPAKNLIRRPFKAGARRSLYKVK 253
KPA + +R AR +L ++
Sbjct: 72 KPATSYVRTTINKNARATLSSIR 94
Score = 39.9 bits (89), Expect = 0.020
Identities = 17/29 (58%), Positives = 23/29 (79%)
Frame = +1
Query: 256 LLKANHYRTDLCKATLRRASAILRSQRPI 342
+++ N YR DL A +RRASAILRSQ+P+
Sbjct: 96 MIRKNKYRPDLRMAAIRRASAILRSQKPV 124
>UniRef50_A7RYT2 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 137
Score = 72.1 bits (169), Expect = 4e-12
Identities = 35/84 (41%), Positives = 52/84 (61%)
Frame = +2
Query: 2 NNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKGFTVVYKKAKAT 181
N+ FLV+ + K +KEPNNVT L++F+YNGL++KK VGV P KG + +K KA
Sbjct: 13 NSCFLVRSQG--KTLTKEPNNVTGLNAFKYNGLVNKKVVGVDAAPSGKGVVITTRKNKAA 70
Query: 182 RKPAKNLIRRPFKAGARRSLYKVK 253
KP K + + +RR+L ++
Sbjct: 71 NKPGKIMNKITISRDSRRTLKTIE 94
Score = 36.3 bits (80), Expect = 0.25
Identities = 22/69 (31%), Positives = 35/69 (50%)
Frame = +1
Query: 133 P*QEGIHSSVQESKGYQKAR*KLNPPSIQGWCQEVTVQSEELLKANHYRTDLCKATLRRA 312
P +G+ + +++K K +N +I + E + N+YR DL +RRA
Sbjct: 55 PSGKGVVITTRKNKAANKPGKIMNKITISRDSRRTLKTIEGVCDKNYYRMDLKDPAMRRA 114
Query: 313 SAILRSQRP 339
AILRSQ+P
Sbjct: 115 CAILRSQKP 123
>UniRef50_A6YMN6 Cluster: Large subunit ribosomal protein 28; n=19;
Neodiplogasteridae|Rep: Large subunit ribosomal protein
28 - Pristionchus sp. 11 RS5228
Length = 127
Score = 67.7 bits (158), Expect = 9e-11
Identities = 34/82 (41%), Positives = 48/82 (58%)
Frame = +2
Query: 2 NNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKGFTVVYKKAKAT 181
N+AFL ++R I+K FS+EP N+ ++S YNGL + KAVGV D K V KK
Sbjct: 6 NSAFLRRQRGIQKAFSREPLNLKGINSPNYNGLTNNKAVGVTLAEDNKSVVVSVKKTGKK 65
Query: 182 RKPAKNLIRRPFKAGARRSLYK 247
PA+++I+ K G R + K
Sbjct: 66 NLPAQSVIKTTIKRGGARGIVK 87
>UniRef50_Q09JQ7 Cluster: 60S ribosomal protein L28; n=3;
Ixodoidea|Rep: 60S ribosomal protein L28 - Argas
monolakensis
Length = 142
Score = 66.9 bits (156), Expect = 2e-10
Identities = 35/84 (41%), Positives = 50/84 (59%)
Frame = +2
Query: 5 NAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKGFTVVYKKAKATR 184
++FLVKKRNIKK FS +P N +++ R+ G I K+A+ V + KG T VY K
Sbjct: 15 SSFLVKKRNIKKWFSTDPLNPKGVYANRFAGTIKKRALTVEPHSSGKGVTFVYLAHKGAT 74
Query: 185 KPAKNLIRRPFKAGARRSLYKVKS 256
KPAK L R G RR++ +++
Sbjct: 75 KPAKRLKRVQLVKGPRRTMVSIRN 98
Score = 31.5 bits (68), Expect = 7.1
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +1
Query: 271 HYRTDLCKATLRRASAILRSQRPI 342
+YR DL + RRASAIL+SQR I
Sbjct: 105 YYRRDLRRVCQRRASAILKSQRAI 128
>UniRef50_Q7Z0U0 Cluster: Ribosomal protein L28; n=2; Schistosoma
japonicum|Rep: Ribosomal protein L28 - Schistosoma
japonicum (Blood fluke)
Length = 116
Score = 66.5 bits (155), Expect = 2e-10
Identities = 34/85 (40%), Positives = 50/85 (58%)
Frame = +2
Query: 2 NNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKGFTVVYKKAKAT 181
N+ FL+K+ + FS++P N+ N + FRY G +HKKA+G+ E KG V K
Sbjct: 13 NHCFLMKRG--PECFSRDPLNLKNKNCFRYCGPVHKKAIGIKEERYGKGVVVTTKNVAKD 70
Query: 182 RKPAKNLIRRPFKAGARRSLYKVKS 256
KPAK + R F G RR+L K+++
Sbjct: 71 HKPAKAVTRTKFVRGRRRTLQKIRN 95
>UniRef50_Q4KTF6 Cluster: L28; n=1; Suberites domuncula|Rep: L28 -
Suberites domuncula (Sponge)
Length = 136
Score = 66.1 bits (154), Expect = 3e-10
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Frame = +2
Query: 2 NNAFLVKKRNIKKP---FSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKGFTVVYKKA 172
+++FL++++ + F+ EPNNV N +SF++NGL++KK VGV D KG K++
Sbjct: 13 SSSFLLRRKGPRGSGVTFTTEPNNVMNKNSFKFNGLVNKKVVGVSSAADNKGVLFKTKRS 72
Query: 173 KATRKPAKNLIRRPFKAGARRSLYKVK 253
K KPAK +R RR+ +K
Sbjct: 73 KVVSKPAKMFVRATLSKDRRRAFKSIK 99
Score = 35.1 bits (77), Expect = 0.57
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +1
Query: 259 LKANHYRTDLCKATLRRASAILRSQRP 339
L+ YR DL + +RRASAIL SQRP
Sbjct: 102 LECTEYRPDLAELAVRRASAILSSQRP 128
>UniRef50_Q4P4F5 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 221
Score = 63.7 bits (148), Expect = 1e-09
Identities = 30/81 (37%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Frame = +2
Query: 2 NNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKGFTVVYKKAKAT 181
N++F+VK++ I + FS+EP N+ LHS++Y+GL++ KAVG+ KG + K AK +
Sbjct: 14 NSSFIVKQKGIGRIFSREPRNLVQLHSYKYSGLVNAKAVGIEAAKSGKGVVITTKNAKQS 73
Query: 182 RKPAKNLIRRPF--KAGARRS 238
K + K G RR+
Sbjct: 74 SSAIKKTVNVATLKKGGGRRT 94
>UniRef50_Q2U9I8 Cluster: RIB40 genomic DNA, SC111; n=7;
Pezizomycotina|Rep: RIB40 genomic DNA, SC111 -
Aspergillus oryzae
Length = 157
Score = 56.8 bits (131), Expect = 2e-07
Identities = 32/83 (38%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Frame = +2
Query: 5 NAFLVKKRNIK-KPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKGFTVVYKKAKAT 181
NAFLVK+ + FS++P N+ N HSF+Y G + KA+G V+ + G V+ KK+
Sbjct: 21 NAFLVKRNSGGGSQFSRDPLNLQNKHSFKYAGYANTKAIG-VQPTENGGVVVLTKKSGNA 79
Query: 182 RKPAKNLIRRPF-KAGARRSLYK 247
++P KN +R F + R +YK
Sbjct: 80 QQPGKNAVRVTFGPKASTRKIYK 102
>UniRef50_Q4WDL9 Cluster: 60S ribosomal protein L28; n=8;
Pezizomycotina|Rep: 60S ribosomal protein L28 -
Aspergillus fumigatus (Sartorya fumigata)
Length = 157
Score = 55.2 bits (127), Expect = 5e-07
Identities = 34/83 (40%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Frame = +2
Query: 5 NAFLVKKRNIK-KPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKGFTVVYKKAKAT 181
NAFLVK+R FS++P N+ N SF+Y G + KAVG V+ + G V+ KK
Sbjct: 21 NAFLVKRRTGGGSQFSRDPLNLQNKQSFKYAGYANTKAVG-VQATENGGVVVITKKPGNP 79
Query: 182 RKPAKNLIRRPF-KAGARRSLYK 247
++PAKNL+ + A R +YK
Sbjct: 80 QQPAKNLVSVSWGPNAATRKIYK 102
>UniRef50_O82204 Cluster: 60S ribosomal protein L28-1; n=17;
Magnoliophyta|Rep: 60S ribosomal protein L28-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 143
Score = 52.8 bits (121), Expect = 3e-06
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Frame = +2
Query: 2 NNAFLVK---KRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKGFTVVYKKA 172
NN FLVK + N K FSKE NN+TN+HS++++GL +KK V + + + K
Sbjct: 16 NNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTIQAADKDQAVVLATTKT 75
Query: 173 KATRKPA----KNLIRRPF 217
K KP K+++++ F
Sbjct: 76 KKQNKPKLSVNKSILKKEF 94
>UniRef50_O14069 Cluster: Probable 60S ribosomal protein L28e; n=1;
Schizosaccharomyces pombe|Rep: Probable 60S ribosomal
protein L28e - Schizosaccharomyces pombe (Fission yeast)
Length = 134
Score = 48.8 bits (111), Expect = 4e-05
Identities = 33/84 (39%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Frame = +2
Query: 2 NNAFLVKKRNIKK-PFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKGFTVVYKKAKA 178
NN FLVK+ F++EP NV+ ++ R++GL + KAVGV N R + K
Sbjct: 15 NNRFLVKRPEFGGIQFNREPVNVSGKNAQRFSGLCNDKAVGVQANSPRGVVLITKTNPKN 74
Query: 179 TRKPAKNLIRRPFKAGA-RRSLYK 247
+KPAK L R+ A A R YK
Sbjct: 75 AQKPAK-LFRKDVIANASSRKTYK 97
Score = 32.7 bits (71), Expect = 3.1
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = +1
Query: 274 YRTDLCKATLRRASAILRSQRP 339
YR DL K ++ RASAIL SQRP
Sbjct: 108 YRDDLVKVSVARASAILSSQRP 129
>UniRef50_Q6C5X8 Cluster: Similarity; n=1; Yarrowia lipolytica|Rep:
Similarity - Yarrowia lipolytica (Candida lipolytica)
Length = 183
Score = 46.0 bits (104), Expect = 3e-04
Identities = 25/65 (38%), Positives = 35/65 (53%)
Frame = +2
Query: 5 NAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKGFTVVYKKAKATR 184
NA+LVK++ I S++P + NL + +GL H KAVGV V+ K K
Sbjct: 61 NAYLVKRKGIDTTLSRDPYALNNLSTHYESGLSHDKAVGVHYCKPSGKICVITKVVKNAN 120
Query: 185 KPAKN 199
KPAK+
Sbjct: 121 KPAKS 125
>UniRef50_Q2M3Y8 Cluster: Ribosomal protein L28; n=1; Phytophthora
infestans|Rep: Ribosomal protein L28 - Phytophthora
infestans (Potato late blight fungus)
Length = 139
Score = 43.6 bits (98), Expect = 0.002
Identities = 29/76 (38%), Positives = 43/76 (56%)
Frame = +2
Query: 5 NAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKGFTVVYKKAKATR 184
++FLVK+ F++E N+ N + +Y+GL KAV + D+K T+ K KAT+
Sbjct: 15 SSFLVKRNG--NEFAREKFNLLNRNCRKYSGLASTKAVD-ISISDKK-VTLTTKIEKATK 70
Query: 185 KPAKNLIRRPFKAGAR 232
KPAK P + GAR
Sbjct: 71 KPAKAQNAVPLRKGAR 86
>UniRef50_Q21930 Cluster: 60S ribosomal protein L28; n=2;
Caenorhabditis|Rep: 60S ribosomal protein L28 -
Caenorhabditis elegans
Length = 126
Score = 39.5 bits (88), Expect = 0.027
Identities = 26/65 (40%), Positives = 37/65 (56%)
Frame = +2
Query: 2 NNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKGFTVVYKKAKAT 181
N+AFL +R I K FS E N+ ++S +Y+GL +K A+ V + KG V K K
Sbjct: 13 NSAFLRTQRGIGKRFSTEKFNLKKVNSPKYSGLANKHAIDV--SAAAKGVVVSTKNEKG- 69
Query: 182 RKPAK 196
+PAK
Sbjct: 70 -RPAK 73
>UniRef50_Q5CQC8 Cluster: 60S ribosomal protein L28; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L28 -
Cryptosporidium parvum Iowa II
Length = 127
Score = 39.1 bits (87), Expect = 0.035
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = +2
Query: 5 NAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKGFTVVYKKAKATR 184
N +KK N F+ EP N+ NL++ +Y+GL ++++ + P+ G V K AK T+
Sbjct: 14 NTSFIKKNN-GFTFTSEPFNIMNLNTLKYSGLAARRSISMDLVPNSNGKLV--KNAKITK 70
Query: 185 K-PAKNLIRRPFK 220
K + IR P K
Sbjct: 71 KNTGSSTIRCPKK 83
>UniRef50_A2U4J5 Cluster: Type III restriction enzyme, res subunit;
n=2; Bacillus|Rep: Type III restriction enzyme, res
subunit - Bacillus coagulans 36D1
Length = 1068
Score = 38.3 bits (85), Expect = 0.062
Identities = 21/70 (30%), Positives = 36/70 (51%)
Frame = +2
Query: 11 FLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKGFTVVYKKAKATRKP 190
F++ NIK+ + + V +H R GLI + + + E RKG +++ K T +
Sbjct: 47 FVLAAENIKEAYGT--SQVDRIHMLRREGLIEPELMDIFETLRRKGNQAMHEALKFTTEE 104
Query: 191 AKNLIRRPFK 220
AK L+R F+
Sbjct: 105 AKALLRLAFR 114
>UniRef50_Q07HH4 Cluster: Putative uncharacterized protein; n=1;
Rhodopseudomonas palustris BisA53|Rep: Putative
uncharacterized protein - Rhodopseudomonas palustris
(strain BisA53)
Length = 208
Score = 32.7 bits (71), Expect = 3.1
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +2
Query: 164 KKAKATRKPAKNLIRRPFKAGARRSLYKVKSC*RLTTTAQ-TYARLPFVVLQPSSAPRGP 340
KKA A + AK + + KA + + K + R T+A+ T A P ++ +AP
Sbjct: 92 KKAAAKKSSAKKTVAKKAKASSGKKATKKAAKTRAKTSAKSTVAATPETPVEAVAAPAPA 151
Query: 341 SKQKRLRQPQP 373
K ++ R P+P
Sbjct: 152 PKPRKPRAPRP 162
>UniRef50_A4S554 Cluster: Ribosomal protein L28, component of
cytosolic 80S ribosome and 60S large subunit; n=1;
Ostreococcus lucimarinus CCE9901|Rep: Ribosomal protein
L28, component of cytosolic 80S ribosome and 60S large
subunit - Ostreococcus lucimarinus CCE9901
Length = 121
Score = 32.7 bits (71), Expect = 3.1
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +2
Query: 44 FSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKG 148
FS EP NVT SFR +GL + K + + E+ KG
Sbjct: 34 FSAEPGNVTAEVSFRASGLANAKTIDIREHDGGKG 68
>UniRef50_UPI0000DB73A8 Cluster: PREDICTED: similar to Grunge
CG6964-PB, isoform B; n=1; Apis mellifera|Rep:
PREDICTED: similar to Grunge CG6964-PB, isoform B - Apis
mellifera
Length = 250
Score = 31.9 bits (69), Expect = 5.3
Identities = 26/95 (27%), Positives = 44/95 (46%)
Frame = +2
Query: 95 GLIHKKAVGVVENPDRKGFTVVYKKAKATRKPAKNLIRRPFKAGARRSLYKVKSC*RLTT 274
G+I +K + D F V+K+ +A RK ++ RRP + RR ++ S +
Sbjct: 140 GIIQRKLLPHKNVEDIVEFYYVWKRTEAGRKLKRSCTRRPRRFTMRRISAELSSISKTEN 199
Query: 275 TAQTYARLPFVVLQPSSAPRGPSKQKRLRQPQPSR 379
Q A+LP P RG K +R+ +P++
Sbjct: 200 ILQNAAKLP-----PKR--RGKKNTKGVRKTRPTQ 227
>UniRef50_UPI00006CB1D5 Cluster: hypothetical protein
TTHERM_00300660; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00300660 - Tetrahymena
thermophila SB210
Length = 1262
Score = 31.9 bits (69), Expect = 5.3
Identities = 18/73 (24%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +2
Query: 26 RNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKGFTVVYKKAKATRK-PAKNL 202
+NI+KP K+ N +TN ++ + + + K ++ N D FT + + RK K +
Sbjct: 465 KNIEKPIQKQINQITNNYTHQNSMIFSKHSLQQENNNDELNFTQLSQLKGGERKNKMKEI 524
Query: 203 IRRPFKAGARRSL 241
I+ ++R +
Sbjct: 525 IKGTIFINSQRQI 537
>UniRef50_Q4T6N5 Cluster: Chromosome 9 SCAF8684, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 9 SCAF8684, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 966
Score = 31.9 bits (69), Expect = 5.3
Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = -2
Query: 399 LSAY-KLFRLGCGCLSLFCFDGPLG 328
L AY + R+GC C+ L C+DGP G
Sbjct: 360 LEAYARCLRMGCRCIELDCWDGPEG 384
>UniRef50_Q8ILX0 Cluster: Putative uncharacterized protein; n=2;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 3218
Score = 31.5 bits (68), Expect = 7.1
Identities = 19/73 (26%), Positives = 36/73 (49%)
Frame = +2
Query: 2 NNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKGFTVVYKKAKAT 181
NN++++ RNIK F NN+ Y ++ K+ G ++ D+ + Y+K K
Sbjct: 974 NNSYVIHFRNIKISFHMYENNI-------YKSIVRKRK-GAIDLYDKTQSIMKYEKNKKH 1025
Query: 182 RKPAKNLIRRPFK 220
+ KN+ + +K
Sbjct: 1026 KNIYKNIYKNMYK 1038
>UniRef50_Q54XH1 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 901
Score = 31.5 bits (68), Expect = 7.1
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 272 TTAQTYARLPFVVLQPSSAPRGPSKQKRLRQPQPS 376
T QT A+ P+VV+ P P SK + QP P+
Sbjct: 64 TPLQTQAQQPYVVISPDQTPYTQSKTQTQTQPTPN 98
>UniRef50_Q5KLF0 Cluster: 60s ribosomal protein, putative; n=1;
Filobasidiella neoformans|Rep: 60s ribosomal protein,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 156
Score = 31.5 bits (68), Expect = 7.1
Identities = 21/62 (33%), Positives = 32/62 (51%)
Frame = +2
Query: 5 NAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKGFTVVYKKAKATR 184
N+F VK + FS+E N+ N + +Y+GL + K V + +P G + K KA
Sbjct: 14 NSFQVKGGH-GPVFSREKGNLLNKSAHKYSGLANSKVVSI--HPSAAG-GITITKIKADA 69
Query: 185 KP 190
KP
Sbjct: 70 KP 71
>UniRef50_Q9GS21 Cluster: 60S ribosomal protein L28; n=2;
Dictyostelium discoideum|Rep: 60S ribosomal protein L28
- Dictyostelium discoideum (Slime mold)
Length = 132
Score = 31.5 bits (68), Expect = 7.1
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 2 NNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGV 124
NNAFL + S EP N+ N +S +Y+GL + + V
Sbjct: 13 NNAFLKSSHGLT--LSAEPGNLRNKNSLKYSGLARRTTIDV 51
>UniRef50_P19174 Cluster: 1-phosphatidylinositol-4,5-bisphosphate
phosphodiesterase gamma-1; n=65; Eumetazoa|Rep:
1-phosphatidylinositol-4,5-bisphosphate
phosphodiesterase gamma-1 - Homo sapiens (Human)
Length = 1290
Score = 31.5 bits (68), Expect = 7.1
Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = -2
Query: 399 LSAY-KLFRLGCGCLSLFCFDGPLG 328
L AY + R+GC C+ L C+DGP G
Sbjct: 350 LEAYARCLRMGCRCIELDCWDGPDG 374
>UniRef50_P03203 Cluster: Epstein-Barr nuclear antigen 4; n=6; Human
herpesvirus 4|Rep: Epstein-Barr nuclear antigen 4 -
Epstein-Barr virus (strain B95-8) (HHV-4) (Human
herpesvirus 4)
Length = 938
Score = 31.5 bits (68), Expect = 7.1
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +2
Query: 263 RLTTTAQTYARLPFVVLQPSSAPRGPSKQKR 355
+L+++A + A+ P+ V+QPS P P+KQ R
Sbjct: 584 QLSSSAPSCAQTPWPVVQPSQTPDDPTKQSR 614
>UniRef50_UPI0000E493A1 Cluster: PREDICTED: similar to phospholipase
C-gamma; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to phospholipase C-gamma -
Strongylocentrotus purpuratus
Length = 409
Score = 31.1 bits (67), Expect = 9.3
Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = -2
Query: 399 LSAY-KLFRLGCGCLSLFCFDGPLG 328
+ AY + R+GC CL L C+DGP G
Sbjct: 181 VEAYARCLRMGCRCLELDCWDGPDG 205
>UniRef50_Q4RJY4 Cluster: Chromosome 9 SCAF15033, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 9
SCAF15033, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 402
Score = 31.1 bits (67), Expect = 9.3
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 2/102 (1%)
Frame = +1
Query: 34 QKAVQQGAEQCD*PPLLQVQRLDSQESRWCRGEP*QEGI-HSSVQESKG-YQKAR*KLNP 207
Q+ +QQ ++Q +Q L S ++ C G + + S Q+ G +QK R
Sbjct: 165 QRDLQQQSKQWQKTAEIQASELQSMQAE-CNGLQKECSVLRSEKQDMVGKHQKDR----- 218
Query: 208 PSIQGWCQEVTVQSEELLKANHYRTDLCKATLRRASAILRSQ 333
S+QG C + V+ EEL+K KA L+ A LRS+
Sbjct: 219 SSLQGECASLRVEKEELVKTQQKE----KAKLQSECAALRSE 256
>UniRef50_Q8JKL3 Cluster: Orf100; n=1; Heliothis zea virus 1|Rep:
Orf100 - Heliothis zea virus 1
Length = 298
Score = 31.1 bits (67), Expect = 9.3
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +2
Query: 158 VYKKAKATRKPAKNLIRRPF 217
VYKKA A RKP++ +IR PF
Sbjct: 276 VYKKAVAVRKPSRLVIRNPF 295
>UniRef50_A2A0G4 Cluster: Intein C-terminal splicing region domain
protein; n=2; Microscilla marina ATCC 23134|Rep: Intein
C-terminal splicing region domain protein - Microscilla
marina ATCC 23134
Length = 720
Score = 31.1 bits (67), Expect = 9.3
Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +2
Query: 23 KRNIKKPFSKEPNNVTNLHSFRYNG-LIHKKAVGVVENPDRK 145
K NI+K + ++++N H+F NG L+H K + E+ +RK
Sbjct: 678 KENIRKEQTYNLSHISNTHNFFANGILVHNKILNPNEHSNRK 719
>UniRef50_Q7QSE5 Cluster: GLP_426_12155_12580; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_426_12155_12580 - Giardia lamblia
ATCC 50803
Length = 141
Score = 31.1 bits (67), Expect = 9.3
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 68 TNLHSFRYNGLIHKKAVGVVENPDRKG 148
TN+H FR L+HKKA NP +KG
Sbjct: 27 TNVHFFRPKTLVHKKAPLYPRNPIKKG 53
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 406,204,591
Number of Sequences: 1657284
Number of extensions: 8173876
Number of successful extensions: 21508
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 20811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21498
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 19042509735
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -