Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20567
         (415 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    23   1.6  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    23   1.6  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      23   1.6  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    22   2.1  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    22   2.1  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      22   2.1  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   6.3  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    20   8.3  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           20   8.3  

>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 1.6
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 162 TRKQRLPESPLKT*SAVHSRLV 227
           TR Q +P   +KT   +HS LV
Sbjct: 207 TRNQAVPTGTIKTLVQMHSNLV 228


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 22.6 bits (46), Expect = 1.6
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 162 TRKQRLPESPLKT*SAVHSRLV 227
           TR Q +P   +KT   +HS LV
Sbjct: 207 TRNQAVPTGTIKTLVQMHSNLV 228


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 22.6 bits (46), Expect = 1.6
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = +2

Query: 23  KRNIKKPFSKEPNNVT 70
           +RNIK  FS +PNNVT
Sbjct: 170 QRNIKY-FSGDPNNVT 184


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 22.2 bits (45), Expect = 2.1
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +2

Query: 23  KRNIKKPFSKEPNNVT 70
           +RN+K  FS +PNNVT
Sbjct: 168 QRNVKY-FSGDPNNVT 182


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 22.2 bits (45), Expect = 2.1
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +2

Query: 23  KRNIKKPFSKEPNNVT 70
           +RN+K  FS +PNNVT
Sbjct: 170 QRNVKY-FSGDPNNVT 184


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 22.2 bits (45), Expect = 2.1
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +2

Query: 23  KRNIKKPFSKEPNNVT 70
           +RN+K  FS +PNNVT
Sbjct: 168 QRNVKY-FSGDPNNVT 182


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 20.6 bits (41), Expect = 6.3
 Identities = 11/39 (28%), Positives = 14/39 (35%)
 Frame = +2

Query: 215 FKAGARRSLYKVKSC*RLTTTAQTYARLPFVVLQPSSAP 331
           ++   R   Y  K C  L    + Y   P VVL     P
Sbjct: 285 YRYSCRDCSYATKYCHSLKIHLRRYGHTPNVVLDEEGNP 323


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 20.2 bits (40), Expect = 8.3
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 72  LVTLFGSLLNGFLILRF 22
           L+T FG  L  FL++ F
Sbjct: 367 LLTSFGGALTTFLVILF 383


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 20.2 bits (40), Expect = 8.3
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = +1

Query: 148 IHSSVQESKGYQKAR*KLNPPSIQGWCQEVT 240
           ++ SV+E   Y+  R  +N P +  +   VT
Sbjct: 45  MYHSVKEEPIYESCRFSINQPYLNHFDNSVT 75


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,992
Number of Sequences: 336
Number of extensions: 1994
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9068614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)