Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20566
(607 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1193 - 28298656-28298754,28299303-28299377,28299456-282995... 100 2e-21
10_08_0620 - 19321612-19323237 60 1e-09
04_04_0729 + 27612106-27612195,27612284-27612370,27612469-276125... 60 1e-09
06_03_0353 + 19810945-19810975,19811308-19811369,19811741-198118... 59 3e-09
02_02_0253 - 8325437-8325628,8325705-8325779,8325933-8326037,832... 59 3e-09
02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949 56 2e-08
05_07_0067 + 27463703-27463705,27464309-27464365,27464779-274648... 54 1e-07
03_06_0362 + 33379489-33379624,33380161-33380423,33380524-333806... 54 1e-07
03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880... 53 2e-07
05_01_0337 - 2658647-2658722,2658797-2658915,2658995-2659102,265... 49 2e-06
06_03_0477 - 21250811-21250981,21251261-21251374,21251447-212516... 49 3e-06
04_04_1030 - 30249160-30250403,30250787-30251666 34 0.10
03_01_0122 + 954356-954491,954877-955030,955141-955231,955732-95... 33 0.18
12_02_0599 + 20897093-20898357,20898507-20898589,20899840-208999... 33 0.23
12_02_0301 + 17063206-17063964 30 1.6
10_02_0079 + 5016115-5016936 29 2.2
02_03_0052 - 14456925-14457176,14457277-14457437,14457843-144579... 29 2.2
02_01_0437 + 3171932-3172189,3174102-3174302,3174708-3174989 29 2.9
06_01_0135 + 1039018-1041474 28 5.0
05_06_0240 - 26629218-26629323,26629412-26629490,26629656-266297... 28 5.0
05_04_0341 + 20420657-20420925,20421192-20421246 28 5.0
12_02_0030 + 12469707-12469902,12470337-12470658,12472208-124722... 28 6.6
11_04_0096 + 13435988-13436803,13436880-13437053,13437673-134378... 28 6.6
10_08_0166 + 15363630-15365633,15366959-15367496,15367577-15367878 28 6.6
08_02_1627 - 28348225-28348725,28349061-28349114,28352613-283528... 28 6.6
06_03_0536 + 21906583-21908037 28 6.6
04_04_1396 + 33227126-33227846,33228530-33228637,33228825-33230029 28 6.6
02_05_1110 - 34182943-34182963,34183122-34183301,34184201-341845... 28 6.6
02_01_0088 - 627825-628984,629339-629509,629612-630416 28 6.6
07_03_0471 + 18501496-18502104,18503009-18503260,18503367-185035... 27 8.7
07_03_0436 - 18188221-18188373,18189121-18189233,18189817-181898... 27 8.7
03_06_0147 - 31980352-31981629 27 8.7
>06_03_1193 -
28298656-28298754,28299303-28299377,28299456-28299544,
28299679-28299760,28300385-28300474,28300557-28300655,
28300733-28300852,28300968-28301084,28301174-28301309,
28301415-28301584,28301744-28301947,28302032-28302157,
28302841-28303101,28303215-28303229
Length = 560
Score = 99.5 bits (237), Expect = 2e-21
Identities = 47/81 (58%), Positives = 57/81 (70%)
Frame = +3
Query: 6 AFMIGRRTIKNDAVVAGGGSVDMQICAHLRSXCLQLAGKEQLSVAAVARAFEAIPRQLAD 185
A MI RR +KN VV GGG++DM+I +LR +AGK Q V + A+A E IPRQL D
Sbjct: 395 AIMIVRRALKNSTVVPGGGAIDMEISKYLRQHARTIAGKSQFFVNSFAKALEVIPRQLCD 454
Query: 186 NAGLDGTGLLNKLRQKHAAGE 248
NAG D T +LNKLRQKHA+GE
Sbjct: 455 NAGFDATDVLNKLRQKHASGE 475
Score = 72.5 bits (170), Expect = 2e-13
Identities = 35/59 (59%), Positives = 45/59 (76%)
Frame = +2
Query: 245 GAHDGVDVISGEVVDNFAKCVWEPALVKLNAVSAACEATAQILSVDETIKNVKGGEEAQ 421
GA+ GVD+ +G + D+FA VWEPA+VK+NA++AA EA ILSVDET+KN K E AQ
Sbjct: 476 GANFGVDINTGGIADSFANFVWEPAVVKINAINAATEAACLILSVDETVKNPK-SESAQ 533
>10_08_0620 - 19321612-19323237
Length = 541
Score = 60.5 bits (140), Expect = 1e-09
Identities = 30/81 (37%), Positives = 45/81 (55%)
Frame = +3
Query: 6 AFMIGRRTIKNDAVVAGGGSVDMQICAHLRSXCLQLAGKEQLSVAAVARAFEAIPRQLAD 185
AF + R + ++AGGG+ ++++ L + +L G E V A A E IP LA+
Sbjct: 410 AFCVIRCLVNKRFLIAGGGAPEIEMSMQLAAWAKELRGMESYCVREFAEALEVIPYTLAE 469
Query: 186 NAGLDGTGLLNKLRQKHAAGE 248
NAGLD + +LR +HA GE
Sbjct: 470 NAGLDPISTVTELRNRHAKGE 490
>04_04_0729 +
27612106-27612195,27612284-27612370,27612469-27612528,
27612554-27612688,27612769-27612864,27613149-27613214,
27613647-27613864,27614093-27614189,27614605-27614691,
27614892-27615026,27615121-27615225,27615717-27615845,
27615925-27616028,27616598-27616688,27616774-27616857
Length = 527
Score = 60.1 bits (139), Expect = 1e-09
Identities = 30/77 (38%), Positives = 47/77 (61%)
Frame = +3
Query: 6 AFMIGRRTIKNDAVVAGGGSVDMQICAHLRSXCLQLAGKEQLSVAAVARAFEAIPRQLAD 185
A I +RT++++ VVAGGG+V+ + +L + L +EQL++A A + IP+ L+
Sbjct: 380 ALCIVKRTLESNMVVAGGGAVEAALSVYLENLATTLGSREQLAIAEFAESLLIIPKVLSV 439
Query: 186 NAGLDGTGLLNKLRQKH 236
NA D T L+ KLR H
Sbjct: 440 NAAKDATELVAKLRAYH 456
Score = 35.9 bits (79), Expect = 0.025
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Frame = +2
Query: 221 TEAEARRWGAHDGVDVISGEVVDNFAKCVWEPALVKLNAVSAACEATAQILSVDETIKNV 400
T+A+ + + + G+D+ G + +N V EPA+ K+ + A EA IL +D+ IK
Sbjct: 461 TKADKQHFSSM-GLDLSKGIIRNNLEYGVIEPAMSKVKIIQFATEAAITILRIDDMIKLT 519
Query: 401 K---GGEE 415
K G EE
Sbjct: 520 KEESGNEE 527
>06_03_0353 +
19810945-19810975,19811308-19811369,19811741-19811813,
19813292-19813359,19813496-19813565,19813908-19813976,
19814065-19814136,19814247-19814320,19814420-19814697,
19814804-19815188,19815268-19815393,19815583-19815687,
19815986-19815994,19817040-19817114,19817202-19817390
Length = 561
Score = 58.8 bits (136), Expect = 3e-09
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Frame = +3
Query: 6 AFMIGRRTIKNDAVVAGGGSVDMQICAHLRSXCLQLAGKEQLSVAAVARAFEAIPRQLAD 185
A + R +KN ++ GGG+ ++ + A L+ + G E+ A A AFEAIPR LA
Sbjct: 396 AMSVARNILKNPKLLPGGGATELTVSAALKQKSSSVEGVEKWPYEAAALAFEAIPRTLAQ 455
Query: 186 NAGLDGTGLLNKLRQK---HAAGEHTTV 260
N GL+ ++ +L+ K HA GE+ V
Sbjct: 456 NCGLNVIRIMTQLQGKDMLHANGENAWV 483
Score = 37.5 bits (83), Expect = 0.008
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +2
Query: 257 GVDVISGEVVDNFAKCVWEPALVKLNAVSAACEATAQILSVDETIKNVK 403
G+D SG++VD + +W+ VK A EA +L +D+ + +K
Sbjct: 484 GIDGRSGDIVDMKERKIWDSYSVKAQTFKTAIEAACMLLRIDDIVSGIK 532
>02_02_0253 -
8325437-8325628,8325705-8325779,8325933-8326037,
8326249-8326374,8326451-8326835,8326931-8327208,
8327294-8327367,8327476-8327547,8327637-8327705,
8340132-8340201,8340806-8340873,8341571-8341643,
8341807-8341868,8342168-8342198
Length = 559
Score = 58.8 bits (136), Expect = 3e-09
Identities = 31/85 (36%), Positives = 46/85 (54%)
Frame = +3
Query: 6 AFMIGRRTIKNDAVVAGGGSVDMQICAHLRSXCLQLAGKEQLSVAAVARAFEAIPRQLAD 185
A + R KN ++ GGG+ ++ + A L+ + G E+ A A AFEAIPR L
Sbjct: 396 AMSMARNIWKNPKLLPGGGATELTVSATLKQKSSSVEGVEKWPYEAAALAFEAIPRTLLQ 455
Query: 186 NAGLDGTGLLNKLRQKHAAGEHTTV 260
N GL+ + +L+ KHA GE+ V
Sbjct: 456 NCGLNVIRTMTQLQGKHANGENAWV 480
Score = 37.9 bits (84), Expect = 0.006
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +2
Query: 257 GVDVISGEVVDNFAKCVWEPALVKLNAVSAACEATAQILSVDETIKNVK 403
G+D SG++VD + +W+ VK A EA +L +D+ + +K
Sbjct: 481 GIDGSSGDIVDMKERKIWDSYSVKAQTFKTAIEAACMLLRIDDIVSGIK 529
>02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949
Length = 550
Score = 56.0 bits (129), Expect = 2e-08
Identities = 25/68 (36%), Positives = 41/68 (60%)
Frame = +3
Query: 45 VVAGGGSVDMQICAHLRSXCLQLAGKEQLSVAAVARAFEAIPRQLADNAGLDGTGLLNKL 224
++AGGG+ ++++ L + +L G E + A A E IP LA+NAGL+ ++ +L
Sbjct: 432 LIAGGGAPEIEMSMQLAAWAKELQGMESYCIKEFAEALEVIPYTLAENAGLNPISIVTEL 491
Query: 225 RQKHAAGE 248
R +HA GE
Sbjct: 492 RNRHAKGE 499
>05_07_0067 +
27463703-27463705,27464309-27464365,27464779-27464844,
27464985-27465096,27465281-27465409,27466076-27466191,
27466364-27466440,27466678-27467163,27467255-27467570,
27467618-27467797
Length = 513
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/83 (31%), Positives = 47/83 (56%)
Frame = +3
Query: 6 AFMIGRRTIKNDAVVAGGGSVDMQICAHLRSXCLQLAGKEQLSVAAVARAFEAIPRQLAD 185
A + +T+ + V+ GGG +M + + + GK+ ++ A +RA ++IP +AD
Sbjct: 363 ALCVLSQTVNDTRVLYGGGWPEMVMAKEVDGLARKTPGKKSHAIEAFSRALQSIPTIIAD 422
Query: 186 NAGLDGTGLLNKLRQKHAAGEHT 254
NAGLD L+++LR +H + T
Sbjct: 423 NAGLDSADLISQLRAEHHKEQST 445
>03_06_0362 +
33379489-33379624,33380161-33380423,33380524-33380670,
33380753-33380914,33381681-33381758,33382329-33382462,
33382702-33382774,33382852-33382929,33383002-33383124,
33383223-33383317,33383723-33383932,33384115-33384172,
33384268-33384333
Length = 540
Score = 53.6 bits (123), Expect = 1e-07
Identities = 21/71 (29%), Positives = 42/71 (59%)
Frame = +3
Query: 33 KNDAVVAGGGSVDMQICAHLRSXCLQLAGKEQLSVAAVARAFEAIPRQLADNAGLDGTGL 212
++ ++ G + ++++ L+ L+ G +Q ++A A +FE +PR LA+NAGL +
Sbjct: 402 RDSRIIPGAAATEIELARRLKEFSLKETGLDQYAIAKFAESFEMVPRTLAENAGLSAMEI 461
Query: 213 LNKLRQKHAAG 245
++ L +HA G
Sbjct: 462 ISSLYAEHAGG 472
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +2
Query: 257 GVDVISGEVVDNFAKCVWEPALVKLNAVSAACEATAQILSVDETI 391
G+D+ G D +W+ + KL A+ + +A +L VD+ I
Sbjct: 477 GIDLEEGGCKDVSIMKIWDLYVTKLFALKYSADAACTVLRVDQII 521
>03_05_0339 +
23287620-23287676,23287784-23287849,23287937-23288048,
23288240-23288368,23288795-23288866,23289245-23289360,
23289494-23289570,23289788-23290273,23290373-23290688,
23290769-23290915
Length = 525
Score = 52.8 bits (121), Expect = 2e-07
Identities = 26/77 (33%), Positives = 45/77 (58%)
Frame = +3
Query: 6 AFMIGRRTIKNDAVVAGGGSVDMQICAHLRSXCLQLAGKEQLSVAAVARAFEAIPRQLAD 185
A + +T+ + V+ GGG +M + + + GK+ ++ A +RA +AIP +AD
Sbjct: 386 ALCVLSQTVNDTRVLFGGGWPEMVMAKAVDDLARKTPGKKSHAIDAFSRALQAIPTIIAD 445
Query: 186 NAGLDGTGLLNKLRQKH 236
NAGLD L+++LR +H
Sbjct: 446 NAGLDSAELISQLRAEH 462
>05_01_0337 -
2658647-2658722,2658797-2658915,2658995-2659102,
2659187-2659255,2659561-2659655,2659740-2659944,
2660125-2660211,2660291-2660405,2660696-2660802,
2661054-2661146,2661243-2661290,2661345-2661544,
2661993-2662128,2662228-2662291,2662779-2662912
Length = 551
Score = 49.2 bits (112), Expect = 2e-06
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Frame = +3
Query: 21 RRTIKNDAVVAGGGSVDMQICAHLRSXCLQ-LAGKEQLSVAAVARAFEAIPRQLADNAGL 197
+ T++++AVV G G+ ++ HL + + G+ QL V A A A IP+ LA+N+GL
Sbjct: 418 KNTVEDEAVVLGAGAFEVAAKKHLIDNVKKTVKGRAQLGVEAFADALLVIPKTLAENSGL 477
Query: 198 DGTGLLNKLRQKHAAG 245
D ++ L+ +H G
Sbjct: 478 DTQDVIVSLQNEHDRG 493
>06_03_0477 -
21250811-21250981,21251261-21251374,21251447-21251613,
21252051-21252153,21252315-21252367,21252438-21252570,
21252835-21253183,21253685-21254003,21254519-21254717
Length = 535
Score = 48.8 bits (111), Expect = 3e-06
Identities = 23/76 (30%), Positives = 42/76 (55%)
Frame = +3
Query: 6 AFMIGRRTIKNDAVVAGGGSVDMQICAHLRSXCLQLAGKEQLSVAAVARAFEAIPRQLAD 185
A + R I+N+++V GGGS ++ + + + G EQ ++ + A A +AIP LA+
Sbjct: 401 ALCVARNLIRNNSIVYGGGSAEISCSVAVEAAADRYPGVEQYAIRSFADALDAIPLALAE 460
Query: 186 NAGLDGTGLLNKLRQK 233
N+GL L ++ +
Sbjct: 461 NSGLSPIDTLTAVKSQ 476
>04_04_1030 - 30249160-30250403,30250787-30251666
Length = 707
Score = 33.9 bits (74), Expect = 0.10
Identities = 19/66 (28%), Positives = 33/66 (50%)
Frame = +3
Query: 45 VVAGGGSVDMQICAHLRSXCLQLAGKEQLSVAAVARAFEAIPRQLADNAGLDGTGLLNKL 224
VV G + + +HL CL+L G+E+ + VA EA+ R + + L L +L
Sbjct: 593 VVKEAGMRHVNVVSHLILKCLKLKGEERPRMVEVAIELEALRRLMKQHLSLKSEKALREL 652
Query: 225 RQKHAA 242
++ +A
Sbjct: 653 MEQQSA 658
>03_01_0122 +
954356-954491,954877-955030,955141-955231,955732-955806,
955884-955972,956084-956202,956338-956478,956817-956893,
958615-959217
Length = 494
Score = 33.1 bits (72), Expect = 0.18
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = +3
Query: 324 SSLTP*VPPARPPLRFYQWMRPSRMSRAVKRRRCLVAAWAALVWDRTRQWLIT 482
S+ +P A P LR RPSR S + ++ AAL D RQW++T
Sbjct: 8 SAASPSTSSAAPRLRHVARRRPSRRSACPRSAASRLSIMAALGEDPIRQWILT 60
>12_02_0599 +
20897093-20898357,20898507-20898589,20899840-20899903,
20900057-20900354,20900385-20900426
Length = 583
Score = 32.7 bits (71), Expect = 0.23
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = -3
Query: 143 CRHGQLLLASQLQTXRPEMGTDLHVH*SSASDYSIILDRSP 21
CR G+ ++LQ R E+G +LHV SS S L R P
Sbjct: 154 CRDGEEFAVAELQITRSEVGPELHVLRSSTSSRKWELKRPP 194
>12_02_0301 + 17063206-17063964
Length = 252
Score = 29.9 bits (64), Expect = 1.6
Identities = 20/49 (40%), Positives = 30/49 (61%)
Frame = +3
Query: 21 RRTIKNDAVVAGGGSVDMQICAHLRSXCLQLAGKEQLSVAAVARAFEAI 167
RRT++ AVVAGGG M+ A + + ++L G Q + AA+ A EA+
Sbjct: 146 RRTLRRLAVVAGGGGA-MEHAASV-ARLVELLGHGQGAEAALEAAMEAM 192
>10_02_0079 + 5016115-5016936
Length = 273
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +3
Query: 237 AAGEHTTVWTLSVERWWITLRSVCGSRPSSSLTP*VPPAR 356
A G ++TLS+E W +V +P+++ TP PA+
Sbjct: 140 APGHQLRLYTLSLEVWGAAPTAVAPPKPAAAATPTTAPAK 179
>02_03_0052 -
14456925-14457176,14457277-14457437,14457843-14457914,
14458105-14458221,14458310-14458322,14458917-14458946,
14459837-14460010,14460276-14460417,14460731-14460792,
14461047-14461643
Length = 539
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -2
Query: 156 TRGPLPPRTAAPCQPVADXKTGDGHRFACPLI 61
T PLP A PC+ KT GH CPL+
Sbjct: 150 TPPPLPSHAAGPCR-----KTSTGHNHRCPLL 176
>02_01_0437 + 3171932-3172189,3174102-3174302,3174708-3174989
Length = 246
Score = 29.1 bits (62), Expect = 2.9
Identities = 24/84 (28%), Positives = 35/84 (41%)
Frame = +3
Query: 6 AFMIGRRTIKNDAVVAGGGSVDMQICAHLRSXCLQLAGKEQLSVAAVARAFEAIPRQLAD 185
A +I R +KN VV GGG++D+ + Q + S AA + A R A
Sbjct: 117 AIIIVSRAVKNPTVVPGGGAMDVCQLVKINGSICQDVRRRGASHAATSTTGAAAARAPAV 176
Query: 186 NAGLDGTGLLNKLRQKHAAGEHTT 257
DG LL K + A ++
Sbjct: 177 GR-KDGQELLVKQARSQLASSSSS 199
>06_01_0135 + 1039018-1041474
Length = 818
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 201 GTGLLNKLRQKHAAGEHTTVWTLSVERW 284
G L NKL +K+ +H ++WTL E W
Sbjct: 707 GAELANKLLEKYT-NDHDSMWTLLAEVW 733
>05_06_0240 -
26629218-26629323,26629412-26629490,26629656-26629761,
26629844-26629947,26630069-26630168,26630256-26630351,
26630464-26630541,26630603-26630671,26630766-26630846,
26630879-26630935,26631016-26631105,26631192-26631278,
26631690-26631794,26631899-26631994,26632222-26632397,
26632847-26633006,26633151-26633600
Length = 679
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/67 (26%), Positives = 30/67 (44%)
Frame = +3
Query: 24 RTIKNDAVVAGGGSVDMQICAHLRSXCLQLAGKEQLSVAAVARAFEAIPRQLADNAGLDG 203
R + +V GGG + L + E++ V + A +A +A NAG+DG
Sbjct: 539 RAAVEEGIVPGGGVALLYATKEL-DKIITANEDEKIGVQIIKNALKAPLMTIAANAGIDG 597
Query: 204 TGLLNKL 224
++ KL
Sbjct: 598 GVVIGKL 604
>05_04_0341 + 20420657-20420925,20421192-20421246
Length = 107
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -2
Query: 213 GVRSRPGLHCLPADEGWPQTRGPLPPRTA 127
G RPGL C G + RGP PP +A
Sbjct: 5 GGERRPGLPCRRRGRGRREIRGPPPPSSA 33
>12_02_0030 +
12469707-12469902,12470337-12470658,12472208-12472245,
12472486-12473573
Length = 547
Score = 27.9 bits (59), Expect = 6.6
Identities = 18/47 (38%), Positives = 20/47 (42%)
Frame = +2
Query: 116 WQGAAVRGGSGPRV*GHPSSAGRQCRPGRDRTPQ*TEAEARRWGAHD 256
W G A RGG G R +S+ RPG R A RR G D
Sbjct: 124 WAGGAARGGFGRR---RGASSTHAWRPGAGRRKGRRRAARRRSGRKD 167
>11_04_0096 +
13435988-13436803,13436880-13437053,13437673-13437834,
13438548-13438690,13439059-13439134,13439231-13439403,
13439482-13439563,13439949-13440026,13440369-13440461,
13441026-13441187,13441225-13441530,13442265-13442369,
13443097-13443243
Length = 838
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 3/36 (8%)
Frame = -2
Query: 201 RPGLHCLPADEGWPQTRGPLPPRTAAPCQ---PVAD 103
RPG +P G PQ G PP TA + PV+D
Sbjct: 230 RPGFPKMPQQPGGPQINGMHPPATAGVTRFLLPVSD 265
>10_08_0166 + 15363630-15365633,15366959-15367496,15367577-15367878
Length = 947
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 110 TGWQGAAVRGGSGPRV*GHPSSAGRQCRPG 199
+GW G+ V+GG G R G + G PG
Sbjct: 838 SGWSGSGVQGGFGVRRPGFGAQGGGSSWPG 867
>08_02_1627 -
28348225-28348725,28349061-28349114,28352613-28352810,
28352856-28353380
Length = 425
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = -1
Query: 94 RRWA-QICMSTDPPPATTASFLIVL 23
RRW Q C S+DPP A A+ L++L
Sbjct: 6 RRWRRQRCCSSDPPLAVAAAALLLL 30
>06_03_0536 + 21906583-21908037
Length = 484
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -1
Query: 271 DNVHTVVCSPAACFCLSLLRSPVPSRPA 188
D+VH P A L LL SP P+ PA
Sbjct: 32 DDVHCPTAPPPAAALLCLLLSPAPTLPA 59
>04_04_1396 + 33227126-33227846,33228530-33228637,33228825-33230029
Length = 677
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +3
Query: 30 IKNDAVVAGGGSVDMQICAHLRSXCLQLAGKEQLSVAAVARAFEAIPR 173
I + +V G+ D ++ A L CL+L G+E+ ++ V E + R
Sbjct: 581 ILDSQIVNEVGAEDAKVVAKLAEACLRLKGEERPTMRQVETTLEDVQR 628
>02_05_1110 -
34182943-34182963,34183122-34183301,34184201-34184546,
34184794-34184846
Length = 199
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = +2
Query: 113 GWQGAAVRG-GSGPRV*GHPSSAGRQCRP 196
GWQ A+ G G P+ GRQCRP
Sbjct: 89 GWQSGAIVGRGIAPKDEESGGDGGRQCRP 117
>02_01_0088 - 627825-628984,629339-629509,629612-630416
Length = 711
Score = 27.9 bits (59), Expect = 6.6
Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 6/86 (6%)
Frame = +3
Query: 39 DAVVAGGGSVDMQICAHLRSXCLQLAGKEQLSVAAVARAFEAI----PRQLADNAGLDGT 206
D + G G+ Q A L CL G+E+ + VA +AI QL + A +
Sbjct: 623 DRNILGVGTELFQDVAQLAKCCLSTKGEERPLMTEVAERLKAIRSTWREQLIEGANEETV 682
Query: 207 GLLNKLRQ--KHAAGEHTTVWTLSVE 278
LL Q G H ++ L +E
Sbjct: 683 CLLENSSQYDPSTTGRHGSLMALDIE 708
>07_03_0471 + 18501496-18502104,18503009-18503260,18503367-18503537,
18503693-18503743,18503868-18503960,18504125-18504220,
18504318-18504368,18504452-18504570,18504909-18505017,
18505391-18505513,18505590-18505661,18505963-18506034,
18506125-18506191,18506260-18506402,18506494-18506565,
18506632-18506760,18507317-18507472,18507579-18507692,
18507791-18507889,18507974-18508051,18508402-18508536,
18509081-18509155,18509247-18509361,18509458-18509828,
18509903-18509965,18510049-18510120,18510285-18510413,
18510512-18510628,18510902-18511018
Length = 1289
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = -2
Query: 201 RPGLHCLPADEGWPQTRGPLPPRTAAPCQPVADXKTGDGH 82
+PG+H G+P R P PP A QP A G H
Sbjct: 1015 KPGVH----PSGYPLPRMPFPPFAGAHSQPYAIPTRGSLH 1050
>07_03_0436 -
18188221-18188373,18189121-18189233,18189817-18189889,
18189979-18190046,18190132-18190372,18191614-18191732,
18192977-18193028,18193178-18193192
Length = 277
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +3
Query: 297 RSVCGS-RPSSSLTP*VPPARPPLRFY 374
R CG+ RPS SL+P VPP PP Y
Sbjct: 48 RGACGAPRPSPSLSPRVPP--PPAAGY 72
>03_06_0147 - 31980352-31981629
Length = 425
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 5/39 (12%)
Frame = +1
Query: 73 CKSVPISGLXVCN-----WLARSSCPWRQWPARLRPSLV 174
C S VCN W A S PWR WP RP++V
Sbjct: 124 CFSPADDAYAVCNPATASWTAVPSPPWRSWP---RPAIV 159
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,976,417
Number of Sequences: 37544
Number of extensions: 440527
Number of successful extensions: 1595
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1593
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1442939384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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