Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20566
         (607 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      25   1.4  
AY745225-1|AAU93492.1|  156|Anopheles gambiae cytochrome P450 pr...    24   4.4  
DQ437578-1|ABD96048.1|  234|Anopheles gambiae short neuropeptide...    23   5.8  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    23   5.8  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    23   5.8  
AY645021-1|AAT92557.1|  163|Anopheles gambiae even-skipped protein.    23   7.7  

>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 25.4 bits (53), Expect = 1.4
 Identities = 14/44 (31%), Positives = 19/44 (43%)
 Frame = +3

Query: 378 WMRPSRMSRAVKRRRCLVAAWAALVWDRTRQWLITLLITDYDHL 509
           W R + + + V  R   +  + A     T  W   LLITDY  L
Sbjct: 296 WFRETEIYQTVLMRNENILGFIAADIKGTGSWTQMLLITDYHEL 339


>AY745225-1|AAU93492.1|  156|Anopheles gambiae cytochrome P450
           protein.
          Length = 156

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 19/51 (37%), Positives = 25/51 (49%)
 Frame = -3

Query: 545 NTKSETVQTRAT*VIIVCY*QCY*PLSSPIPYEGGPCRDQASAPLHRP*HS 393
           +TK  T++ R T VII  Y   Y P   P+PY+  P R        RP H+
Sbjct: 97  DTKRITLR-RGTSVIIPVYAIHYDPDIYPMPYKFDPDRFLEENRKSRPRHA 146


>DQ437578-1|ABD96048.1|  234|Anopheles gambiae short neuropeptide F
           prepropeptide protein.
          Length = 234

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 8/31 (25%), Positives = 15/31 (48%)
 Frame = +2

Query: 164 HPSSAGRQCRPGRDRTPQ*TEAEARRWGAHD 256
           H  + G+Q +P  + + +    +  RWG  D
Sbjct: 178 HQLTTGQQAQPANEASEKRAPTQRLRWGRSD 208


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +2

Query: 323 VKLNAVSAACEATAQILSVDETIKNVKGGEEA 418
           VK NA++     TA+ LSV E +  +  G  A
Sbjct: 355 VKQNAINVILAVTAEELSVYEQLSRLVEGSSA 386


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = -2

Query: 213 GVRSRPGLHCLPADEGWPQTRGPLPPR 133
           G    PG+   P  +G P   GP+ PR
Sbjct: 391 GTTGLPGIPGPPCVDGLPGAAGPVGPR 417


>AY645021-1|AAT92557.1|  163|Anopheles gambiae even-skipped protein.
          Length = 163

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
 Frame = -2

Query: 168 GWPQ-TRGPLPPRTAAPCQPVA 106
           G+P+ T  PLP RT A   PVA
Sbjct: 1   GYPRYTPYPLPQRTTATSLPVA 22


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 635,414
Number of Sequences: 2352
Number of extensions: 12833
Number of successful extensions: 25
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58870980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)